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Featured researches published by Dian Jiao.


Journal of Chemical Theory and Computation | 2011

First Principles Calculations of Atomic Nickel Redox Potentials and Dimerization Free Energies: A Study of Metal Nanoparticle Growth.

Dian Jiao; Kevin Leung; Susan B. Rempe; Tina M. Nenoff

The redox potentials and dimerization free energies of transient transition metal cations in water shed light on the reactivity of species with unusual charge states and are particularly pertinent to understanding the mechanism and feasibility of radiolysis-assisted metal nanoparticle growth from salt solutions. A combination of quasi-chemical theory and ab initio molecular dynamics thermodynamic integration methods are applied to calculate these properties for nickel. The reduction potential for Ni(2+) (aq) is predicted to be between -1.05 to -1.28 V, which is substantially lower than previous estimates. This suggests that Ni(2+) reduction may possibly occur in the presence of organic radical anion electron scavengers and hydrogen atoms, not just hydrated electrons. In contrast, Ni(+) is found to be stable against disproportionation. The formation of dimers Ni2 and Ni2(+) from Ni and Ni(+) are predicted to be favorable in water.


Journal of Chemical Physics | 2011

CO2 solvation free energy using quasi-chemical theory

Dian Jiao; Susan B. Rempe

Accumulation of greenhouse gases, especially carbon dioxide, is believed to be the key factor in global climate change. To develop effective ways to remove CO(2) from the atmosphere, it is helpful to understand the mechanism of CO(2) solvation first. Here we investigate the thermodynamics of CO(2) hydration using quasi-chemical theory. Two approaches for estimating hydration free energy are carried out. Both agree reasonably well with experimental measurements. Analysis of the free energy components reveals that the weak hydration free energy results from a balance of unfavorable molecular packing and favorable chemical association.


Archive | 2012

Structural Models and Molecular Thermodynamics of Hydration of Ions and Small Molecules

David M. Rogers; Dian Jiao; Lawrence R. Pratt; Susan B. Rempe

Abstract Solution equilibria are at the core of solvent-catalyzed reactions, solute separations, drug delivery, vapor partitioning and interfacial phenomena. Molecular simulation using thermodynamic integration or perturbation theory allows the calculation of these equilibria from parameterized force field models; however, the statistical many-body nature of solution environments inevitably complicates molecular interpretations of these phenomena. If our goal is molecular understanding in addition to prediction, then the statistical thermodynamic theories designed for mechanistic insight from structural analyses are especially important. In this report, we survey recent advances in the thermodynamic analysis of rigorous local structural models based on chemical structure.


Proposed for publication in Annual Reports in Computational Chemistry. | 2012

Chemical Solvation of Ions and Small Molecules: Local Thermodynamic Models.

David M. Rogers; Dian Jiao; Susan B. Rempe; Lawrence R. Pratt

Abstract Solution equilibria are at the core of solvent-catalyzed reactions, solute separations, drug delivery, vapor partitioning and interfacial phenomena. Molecular simulation using thermodynamic integration or perturbation theory allows the calculation of these equilibria from parameterized force field models; however, the statistical many-body nature of solution environments inevitably complicates molecular interpretations of these phenomena. If our goal is molecular understanding in addition to prediction, then the statistical thermodynamic theories designed for mechanistic insight from structural analyses are especially important. In this report, we survey recent advances in the thermodynamic analysis of rigorous local structural models based on chemical structure.


Annual Reports in Computational Chemistry | 2012

Chapter Four – Structural Models and Molecular Thermodynamics of Hydration of Ions and Small Molecules

David M. Rogers; Dian Jiao; Lawrence R. Pratt; Susan B. Rempe

Abstract Solution equilibria are at the core of solvent-catalyzed reactions, solute separations, drug delivery, vapor partitioning and interfacial phenomena. Molecular simulation using thermodynamic integration or perturbation theory allows the calculation of these equilibria from parameterized force field models; however, the statistical many-body nature of solution environments inevitably complicates molecular interpretations of these phenomena. If our goal is molecular understanding in addition to prediction, then the statistical thermodynamic theories designed for mechanistic insight from structural analyses are especially important. In this report, we survey recent advances in the thermodynamic analysis of rigorous local structural models based on chemical structure.


Biochemistry | 2012

Combined Density Functional Theory (DFT) and Continuum Calculations of pKa in Carbonic Anhydrase

Dian Jiao; Susan L. B. Rempe


Biochemistry | 2011

Combined DFT and continuum calculations of pKa in carbonic anhydrase.

Susan L. B. Rempe; Dian Jiao


The Royal Society of Chemistry | 2013

Case study of Rb%2B(aq) quasi-chemical theory of ion hydration and the no split occupancies rule.

Susan B. Rempe; Dubravko Sabo; Dian Jiao; Sameer Varma; Lawrence R. Pratt


Biophysical Journal | 2012

Prediction of pKa Value of Zinc-Bound Water in Carbonic Anhydrase

Dian Jiao; Susan B. Rempe


Archive | 2011

Combined DFT and Continuum Calculation of pKas in Carbonic Anhydrase.

Dian Jiao; Susan L. B. Rempe

Collaboration


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Susan B. Rempe

Sandia National Laboratories

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David M. Rogers

Sandia National Laboratories

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Kevin Leung

University of California

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Tina M. Nenoff

Sandia National Laboratories

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Dubravko Sabo

Sandia National Laboratories

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Sameer Varma

University of South Florida

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