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Featured researches published by Dirk Chelius.


Biochemistry | 2008

Isomerization of a Single Aspartyl Residue of Anti-Epidermal Growth Factor Receptor Immunoglobulin γ2 Antibody Highlights the Role Avidity Plays in Antibody Activity

Douglas S. Rehder; Dirk Chelius; Arnold McAuley; Thomas M. Dillon; Gang Xiao; Jill Crouse-Zeineddini; Louisa Vardanyan; Natalie Perico; Venkat Mukku; David N. Brems; Masazumi Matsumura; Pavel V. Bondarenko

A new isoform of the light chain of a fully human monoclonal immunoglobulin gamma2 (IgG2) antibody panitumumab against human epidermal growth factor receptor (EGFR) was generated by in vitro aging. The isoform was attributed to the isomerization of aspartate 92 located between phenylalanine 91 and histidine 93 residues in the antigen-binding region. The isomerization rate increased with increased temperature and decreased pH. A size-exclusion chromatography binding assay was used to show that one antibody molecule was able to bind two soluble extracellular EGFR molecules in solution, and isomerization of one or both Asp-92 residues deactivated one or both antigen-binding regions, respectively. In addition, isomerization of Asp-92 showed a decrease in in vitro potency as measured by a cell proliferation assay with a 32D cell line that expressed the full-length human EGFR. The data indicate that antibodies containing either one or two isomerized residues were not effective in inhibiting EGFR-mediated cell proliferation, and that two unmodified antigen binding regions were needed to achieve full efficacy. For comparison, the potency of an intact IgG1 antibody cetuximab against the same receptor was correlated with the bioactivity of its individual antigen-binding fragments. The intact IgG1 antibody with two antigen-binding fragments was also much more active in suppressing cell proliferation than the individual fragments, similar to the IgG2 results. These results indicated that avidity played a key role in the inhibition of cell proliferation by these antibodies against the human EGFR, suggesting that their mechanisms of action are similar.


Growth Hormone & Igf Research | 2002

Identification of N-linked oligosaccharides of rat insulin-like growth factor binding protein-4.

Dirk Chelius; Shiaw-Lin Wu; Pavel V. Bondarenko

Insulin-like growth factor binding protein-4 (IGFBP-4) is, like the other five IGFBPs, a critical regulator of the activity of insulin-like growth factor (IGF)-I and IGF-II. Whereas IGFBP-1 and IGFBP-2 are not glycosylated, IGFBP-3 and IGFBP-4 are N-glycosylated and IGFBP-5 and IGFBP-6 are O-glycosylated. In this study we identified the glycosylation of IGFBP-4 using a nanoflow LC/MS/MS techniques. Although N-linked oligosaccharides are structurally diverse, their variants are well reported in the literature. Based on the molecular weight of the possible oligosaccharide moieties, we identified five different glycosylation isoforms of the protein. Identified glycans were biantennary and differ in the number of sialic acid terminal residues and/or core modification with fucose.


Journal of Proteome Research | 2002

Quantitative profiling of proteins in complex mixtures using liquid chromatography and mass spectrometry.

Dirk Chelius; Pavel V. Bondarenko


Analytical Chemistry | 2002

Identification and relative quantitation of protein mixtures by enzymatic digestion followed by capillary reversed-phase liquid chromatography-tandem mass spectrometry.

Pavel V. Bondarenko; Dirk Chelius; Thomas A. Shaler


Analytical Chemistry | 2005

Identification and Characterization of Deamidation Sites in the Conserved Regions of Human Immunoglobulin Gamma Antibodies

Dirk Chelius; and Douglas S. Rehder; Pavel V. Bondarenko


Analytical Chemistry | 2006

Formation of Pyroglutamic Acid from N-Terminal Glutamic Acid in Immunoglobulin Gamma Antibodies

Dirk Chelius; Kay Jing; Alexis Lueras; Douglas S. Rehder; Thomas M. Dillon; Alona Vizel; Rahul S. Rajan; Tiansheng Li; Michael J. Treuheit; Pavel V. Bondarenko


Analytical Chemistry | 2003

Global protein identification and quantification technology using two-dimensional liquid chromatography nanospray mass spectrometry

Dirk Chelius; Terry Zhang; Guanghui Wang; Rong-Fong Shen


Bioconjugate Chemistry | 2003

Capture of peptides with N-terminal serine and threonine: a sequence-specific chemical method for Peptide mixture simplification.

Dirk Chelius; Thomas A. Shaler


Analytical Chemistry | 2007

18O Labeling Method for Identification and Quantification of Succinimide in Proteins

Gang Xiao; Pavel V. Bondarenko; Jaby Jacob; Grace C. Chu; Dirk Chelius


Growth Hormone & Igf Research | 2000

Characterization of the enzymatic specificity of the IGF-dependent insulin-like growth factor binding protein-4 (IGFBP-4) protease

Dirk Chelius; Cheryl A. Conover; Michael A. Baldwin; E. Martin Spencer

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E. Martin Spencer

California Pacific Medical Center

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