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Featured researches published by Dirk Scharn.


Journal of Medicinal Chemistry | 2009

Novel Small Molecule Bradykinin B2 Receptor Antagonists

Christoph Gibson; Karsten Schnatbaum; Jochen Pfeifer; Elsa Locardi; Matthias Paschke; Ulf Reimer; Uwe Richter; Dirk Scharn; Alexander Faussner; Thomas Tradler

Blockade of the bradykinin B(2) receptor provides therapeutic benefit in hereditary angioedema (HAE) and potentially in many other diseases. Herein, we describe the development of highly potent B(2) receptor antagonists with a molecular weight of approximately 500 g/mol. First, known quinoline-based B(2) receptor antagonists were stripped down to their shared core motif 53, which turned out to be the minimum pharmacophore. Targeted modifications of 53 resulted in the highly water-soluble lead compound 8a. Extensive exploration of its structure-activity relationship resulted in a series of highly potent B(2) receptor antagonists, featuring a hydrogen bond accepting functionality, which presumably interacts with the side chain of Asn-107 of the B(2) receptor. Optimization of the microsomal stability and cytochrome P450 inhibition eventually led to the discovery of the highly potent and orally available B(2) receptor antagonist 52e (JSM10292), which showed the best overall properties.


Journal of Medicinal Chemistry | 2013

Bispyrimidines as potent histamine H4 receptor ligands: delineation of structure activity relationships and detailed H4 receptor binding mode

Harald Engelhardt; Sabine Schultes; Chris de Graaf; Saskia Nijmeijer; Henry F. Vischer; Obbe P. Zuiderveld; Julia Dobler; Katharina Stachurski; Moriz Mayer; Heribert Arnhof; Dirk Scharn; Eric Haaksma; Iwan J. P. de Esch; Rob Leurs

The basic methylpiperazine moiety is considered a necessary substructure for high histamine H4 receptor (H4R) affinity. This moiety is however also the metabolic hot spot for various classes of H4R ligands (e.g., indolcarboxamides and pyrimidines). We set out to investigate whether mildly basic 2-aminopyrimidines in combination with the appropriate linker can serve as a replacement for the methylpiperazine moiety. In the series of 2-aminopyrimidines, the introduction of an additional 2-aminopyrimidine moiety in combination with the appropriate linker lead to bispyrimidines displaying pKi values for binding the human H4R up to 8.2. Furthermore, the methylpiperazine replacement results in compounds with improved metabolic properties. The attempt to transfer the knowledge generated in the class of bispyrimidines to the indolecarboxamides failed. Combining the derived structure-activity relationships with homology modeling leads to new detailed insights in the molecular aspects of ligand-H4R binding in general and the binding mode of the described bispyrimidines in specific.


Bioorganic & Medicinal Chemistry Letters | 2010

SAR of N-phenyl piperidine based oral integrin α5β1 antagonists

Gunther Zischinsky; Frank Osterkamp; Doerte Vossmeyer; Grit Zahn; Dirk Scharn; Ariane Zwintscher; Roland Stragies

Recently, a new class of selective integrin alpha5beta1inhibitors consisting of a heterocyclic based scaffold was published. Herein the SAR and pharmacokinetic profiles of N-phenyl piperidine derivatives are described.


Bioorganic & Medicinal Chemistry Letters | 2010

Discovery of orally available integrin α5β1 antagonists

Gunther Zischinsky; Frank Osterkamp; Doerte Vossmeyer; Grit Zahn; Dirk Scharn; Ariane Zwintscher; Roland Stragies

Previous research within our laboratories identified the 3-hydroxypyrrolidine scaffold 1 as a new and selective integrin alpha5beta1 inhibitor class which was designed for local administration. Herein the discovery of new orally available integrin alpha5beta1 inhibitor scaffolds for potential systemic treatment is described.


Bioorganic & Medicinal Chemistry Letters | 2010

Novel small molecule bradykinin B1 receptor antagonists. Part 2: 5-membered diaminoheterocycles.

Gunther Zischinsky; Roland Stragies; Marco Schaudt; Jochen Pfeifer; Christoph Gibson; Elsa Locardi; Dirk Scharn; Uwe Richter; Holger Kalkhof; Klaus Dinkel; Karsten Schnatbaum

Efforts to find new bradykinin B(1) receptor antagonists identified 2-aminobenzimidazole as a novel core. Subsequent transformation into five-membered diaminoheterocycle derivatives and their synthesis and SAR is described. This resulted in compounds with low nanomolar activity.


Bioorganic & Medicinal Chemistry Letters | 2010

Novel small molecule bradykinin B1 receptor antagonists. Part 1: benzamides and semicarbazides.

Marco Schaudt; Elsa Locardi; Gunther Zischinsky; Roland Stragies; Jochen Pfeifer; Christoph Gibson; Dirk Scharn; Uwe Richter; Holger Kalkhof; Klaus Dinkel; Karsten Schnatbaum

The synthesis and SAR of two series of bradykinin B(1) receptor antagonists is described. The benzamide moiety proved to be a suitable replacement for the aryl ester functionality of biaryl based antagonists. In addition, it was found that semicarbazides can effectively replace cyclopropyl amino acids. The compounds with the best overall profile were biaryl semicarbazides which display high antagonistic activity, low Caco-2 efflux and high oral bioavailability in the rat.


Bioorganic & Medicinal Chemistry Letters | 2010

Novel small molecule bradykinin B1 receptor antagonists. Part 3: hydroxyurea derivatives.

Karsten Schnatbaum; Marco Schaudt; Roland Stragies; Jochen Pfeifer; Christoph Gibson; Elsa Locardi; Dirk Scharn; Uwe Richter; Holger Kalkhof; Klaus Dinkel; Gunther Zischinsky

Hydroxy urea moieties are introduced as a new class of bradykinin B(1) receptor antagonists. First, the SAR of the lead compound was systematically explored. Subsequent optimization resulted in the identification of several biaryl-based hydroxyurea bradykinin B(1) receptor antagonists with low-nanomolar activity and very high oral bioavailability in the rat.


ACS Combinatorial Science | 2000

Spatially Addressed Synthesis of Amino- and Amino-Oxy-Substituted 1,3,5-Triazine Arrays on Polymeric Membranes

Dirk Scharn; Holger Wenschuh; Ulrich Reineke; Jens Schneider-Mergener; Lothar Germeroth


Journal of Organic Chemistry | 2001

Sequential Nucleophilic Substitution on Halogenated Triazines, Pyrimidines, and Purines: A Novel Approach to Cyclic Peptidomimetics

Dirk Scharn; Lothar Germeroth; ‡ and Jens Schneider-Mergener; Holger Wenschuh


Bioorganic & Medicinal Chemistry Letters | 2006

Peptidomimetic C5a receptor antagonists with hydrophobic substitutions at the C-terminus : Increased receptor specificity and in vivo activity

Karsten Schnatbaum; Elsa Locardi; Dirk Scharn; Uwe Richter; Heiko Hawlisch; Jochen Knolle; Thomas Polakowski

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