Donald D. Duncan
Portland State University
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Publication
Featured researches published by Donald D. Duncan.
Journal of Biomedical Optics | 2013
David Briers; Donald D. Duncan; Evan Hirst; Sean J. Kirkpatrick; Marcus Larsson; Wiendelt Steenbergen; Tomas Strömberg; Oliver Thompson
Abstract. When laser light illuminates a diffuse object, it produces a random interference effect known as a speckle pattern. If there is movement in the object, the speckles fluctuate in intensity. These fluctuations can provide information about the movement. A simple way of accessing this information is to image the speckle pattern with an exposure time longer than the shortest speckle fluctuation time scale—the fluctuations cause a blurring of the speckle, leading to a reduction in the local speckle contrast. Thus, velocity distributions are coded as speckle contrast variations. The same information can be obtained by using the Doppler effect, but producing a two-dimensional Doppler map requires either scanning of the laser beam or imaging with a high-speed camera: laser speckle contrast imaging (LSCI) avoids the need to scan and can be performed with a normal CCD- or CMOS-camera. LSCI is used primarily to map flow systems, especially blood flow. The development of LSCI is reviewed and its limitations and problems are investigated.
Journal of Biomedical Optics | 2010
Donald D. Duncan; Paul Lemaillet; Mohamed Ibrahim; Quan Dong Nguyen; Matthias Hiller; Jessica Ramella-Roman
We present a new method for the quantitative estimation of blood flow velocity, based on the use of the Radon transform. The specific application is for measurement of blood flow velocity in the retina. Our modified fundus camera uses illumination from a green LED and captures imagery with a high-speed CCD camera. The basic theory is presented, and typical results are shown for an in vitro flow model using blood in a capillary tube. Subsequently, representative results are shown for representative fundus imagery. This approach provides absolute velocity and flow direction along the vessel centerline or any lateral displacement therefrom. We also provide an error analysis allowing estimation of confidence intervals for the estimated velocity.
Optical Engineering | 2012
S. C. Henry; Lisa M. Zurk; Scott Schecklman; Donald D. Duncan
Abstract. Terahertz (THz) technology holds great promise for applications such as explosives detection and nondestructive evaluation. In recent years, three-dimensional (3-D) THz imaging has been considered as a potential method to detect concealed explosives due to the transparent properties of packaging materials in the THz range. Another important advantage of THz systems is they measure the electric field directly. They are also phase coherent, supporting synthetic aperture (SA) imaging. In this paper, a near-field synthetic aperture THz imaging system is investigated for its potential use in detecting hidden objects. Frequency averaging techniques are used to reduce noise side-lobe artifacts, and improve depth resolution. System depth resolution is tested and characterized for performance. It will be shown that, depending on system bandwidth, depth resolution on the order of a few hundred microns can be achieved. A sample consisting of high-density polyethylene and three ball-bearings embedded inside is imaged at multiple depths. 3-D images of familiar objects are generated to demonstrate this capability.
Journal of The Optical Society of America A-optics Image Science and Vision | 2011
Donald D. Duncan; David G. Fischer; Amanda Dayton; Scott A. Prahl
We present a method of using an unmodified differential interference contrast microscope to acquire quantitative information on scatter and absorption of thin tissue samples. A simple calibration process is discussed that uses a standard optical wedge. Subsequently, we present a phase-stepping procedure for acquiring phase gradient information exclusive of absorption effects. The procedure results in two-dimensional maps of the local angular (polar and azimuthal) ray deviation. We demonstrate the calibration process, discuss details of the phase-stepping algorithm, and present representative results for a porcine skin sample.
Journal of Innovative Optical Health Sciences | 2010
Paul Lemaillet; Donald D. Duncan; Art Lompado; Mohamed Ibrahim; Quan Dong Nguyen; Jessica C. Ramella-Roman
Measurement of both oxygen saturation and blood flow in the retinal vessels has proved to give important information about the eye health and the onset of eye pathologies such as diabetic retinopathy. In this study, we present the implementation, on a commercially available fundus camera, of a retinal imager and a retina blood flow velocimeter. The retinal imager uses division of aperture to acquire nine wavelength-dependent sub-images of the retina. Careful consideration is taken to improve image transfer by measuring the optical properties of the fundus camera and modeling the optical train in Zemax. This part of the setup is calibrated with optical phantoms of known optical properties that are also used to build a lookup table (LUT) linking phantom optical properties to measured reflectance. The retina blood flow velocimeter relies on tracking clusters of erythrocytes and uses a fast acquisition camera attached to a zoom lens, with a green illumination LED-engine. Calibration is provided using a calibrated quartz capillary tube and human blood at a known flow rate. Optical properties of liquid phantoms are retrieved from measured reflectance using the LUT, and blood flow measurements in the retina are presented.
Applied Optics | 2014
James C. Gladish; Donald D. Duncan
It is well known that in liquid crystal (LC)-based active polarimetry, alignment and temperature effects impact polarimeter performance. Practically speaking, when constructing a polarimetric measurement system from LC variable retarders (LCVRs), unavoidable alignment and temperature uncertainties will occur, leading to systematic error that propagates to the Mueller matrix. Typical calibration methods use only a single metric to assess polarimeter performance (the condition number) and often ignore the relationship between systematic error and specific Mueller matrix elements. Here we explore alignment and temperature effects in a Stokes generator and polarimeter, each consisting of two LCVRs, through a series of simulations to calibrate the polarimeter and measure the Mueller matrix of air. We achieve this by modifying an existing LCVR model to incorporate alignment and temperature effects. This new approach offers insight into employing LCVRs individually and associating particular Mueller matrix element error with specific LCVR effects.
Proceedings of SPIE, the International Society for Optical Engineering | 2010
Lisa M. Zurk; S. C. Henry; Scott Schecklman; Donald D. Duncan
The spectra obtained from Terahertz (THz) reflection imaging can be distorted by scattering from rough interfaces, layers, and granular inclusions. Since the facets of the object being imaged are not generally aligned normal to the THz beam, the received signal is produced from diffuse scattering, which can be appreciably lower in signal strength than specular returns. These challenges can be addressed with advanced signal processing approaches based upon the coherent and incoherent combination of returns from multiple sensors and frequencies. This paper presents two examples of physics-based processing strategies applied to THz imaging spectroscopy. The first method is based on synthetic aperture processing of a 2D sensor array to provide variable depth focused images of buried inclusions (a ball bearing embedded in polyethylene sample). The second method uses correlation processing to coherently combine multiple sensors and multiple frequencies to extract material signatures from measurements of THz scattering from rough interfaces. Results for both methods show an increase in performance relative to conventional imaging or spectroscopy approaches.
Bios | 2010
Donald D. Duncan; David G. Fischer; Mehran Daneshbod; Amanda Dayton; Scott A. Prahl
The propagation of light through complex structures, such as biological tissue, is a poorly understood phenomenon. Typically the tissue is modeled as an effective medium, and Monte Carlo techniques are used to solve the radiative transport equation. In such an approach the medium is characterized in terms of a limited number of physical scatter and absorption parameters, but is otherwise considered homogeneous. For exploration of propagation phenomena such as spatial coherence, however, a physical model of the tissue medium that allows multiscale structure is required. We present a particularly simple means of establishing such a multiscale tissue characterization based on measurements using a differential interference contrast (DIC) microscope. This characterization is in terms of spatially resolved maps of the (polar and azimuthal) angular ray deviations. With such data, tissues can be characterized in terms of their first and second order scatter properties. We discuss a simple means of calibrating a DIC microscope, the measurement procedure and quantitative interpretation of the ensuing data. These characterizations are in terms of the scatter phase function and the spatial power spectral density
Applied Optics | 2017
James C. Gladish; Donald D. Duncan
Herein, we discuss the remote assessment of the subwavelength organizational structure of a medium. Specifically, we use spectral imaging polarimetry, as the vector nature of polarized light enables it to interact with optical anisotropies within a medium, while the spectral aspect of polarization is sensitive to small-scale structure. The ability to image these effects allows for inference of spatial structural organization parameters. This work describes a methodology for revealing structural organization by exploiting the Stokes/Mueller formalism and by utilizing measurements from a spectral imaging polarimeter constructed from liquid crystal variable retarders and a liquid crystal tunable filter. We provide results to validate the system and then show results from measurements on a mineral sample.
Optical Engineering | 2016
James C. Gladish; Donald D. Duncan
Abstract. Liquid crystal variable retarders (LCVRs) are computer-controlled birefringent devices that contain nanometer-sized birefringent liquid crystals (LCs). These devices impart retardance effects through a global, uniform orientation change of the LCs, which is based on a user-defined drive voltage input. In other words, the LC structural organization dictates the device functionality. The LC structural organization also produces a spectral scatter component which exhibits an inverse power law dependence. We investigate LC structural organization by measuring the voltage-dependent LC spectral scattering signature with an integrating sphere and then relate this observable to a fractal-Born model based on the Born approximation and a Von Kármán spectrum. We obtain LCVR light scattering spectra at various drive voltages (i.e., different LC orientations) and then parameterize LCVR structural organization with voltage-dependent correlation lengths. The results can aid in determining performance characteristics of systems using LCVRs and can provide insight into interpreting structural organization measurements.