E. R. Cope
University of Tennessee
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Featured researches published by E. R. Cope.
Metabolomics | 2017
Brooke A. Clemmons; Robert I. Mihelic; Ronique C. Beckford; Joshua B. Powers; Emily A. Melchior; Z. D. McFarlane; E. R. Cope; Mallory M. Embree; J. Travis Mulliniks; Shawn R. Campagna; Brynn H. Voy; Phillip R. Myer
IntroductionImproving feed utilization in cattle is required to reduce input costs, increase production, and ultimately improve sustainability of the beef cattle industry. Characterizing metabolic differences between efficient and non-efficient animals will allow stakeholders to identify more efficient cattle during backgrounding.ObjectivesThis study used an untargeted metabolomics approach to determine differences in serum metabolites between animals of low and high residual feed intake.MethodsResidual feed intake was determined for 50 purebred Angus steers and 29 steers were selected for the study steers based on low versus high feed efficiency. Blood samples were collected from steers and analyzed using untargeted metabolomics via mass spectrometry. Metabolite data was analyzed using Metaboanalyst, visualized using orthogonal partial least squares discriminant analysis, and p-values derived from permutation testing. Non-esterified fatty acids, urea nitrogen, and glucose were measured using commercially available calorimetric assay kits. Differences in metabolites measured were grouped by residual feed intake was measured using one-way analysis of variance in SAS 9.4.ResultsFour metabolites were found to be associated with differences in feed efficiency. No differences were found in other serum metabolites, including serum urea nitrogen, non-esterified fatty acids, and glucose.ConclusionsFour metabolites that differed between low and high residual feed intake have important functions related to nutrient utilization, among other functions, in cattle. This information will allow identification of more efficient steers during backgrounding.
Physiological Genomics | 2018
E. R. Cope; Brynn H. Voy; Brian K Whitlock; Meg Staton; Thomas Lane; Jack Davitt; J. Travis Mulliniks
To identify molecular pathways that couple metabolic imbalances and reproduction, we randomly assigned 10 castrated male sheep to be centrally injected into the lateral ventricle through intracerebroventricular cannulas with 1 ml of β-hydroxybutyric acid sodium salt solution (BHB; 12,800 µmol/l) or saline solution (CON; 0.9% NaCl). Approximately 2 h postinjection, sheep were humanely euthanized, and hypothalamus and pituitary tissues were harvested for transcriptome characterization by RNA sequencing. RNA was extracted from the hypothalamus and pituitary and sequenced at a high depth (hypothalamus: 468,912,732 reads; pituitary: 515,106,092 reads) with the Illumina Hi-Seq 2500 platform and aligned to Bos taurus and Ovis aries genomes. Of the total raw reads, 87% (hypothalamus) and 90.5% (pituitary) mapped to the reference O. aries genome. Within these read sets, ~56% in hypothalamus and 69% in pituitary mapped to either known or putative protein coding genes. Fragments per kilobase of transcripts per million normalized counts were averaged and ranked to identify the transcript expression level. Gene Ontology analysis (DAVID Bioinformatics Resources) was utilized to identify biological process functions related to genes shared between tissues, as well as functional categories with tissue-specific enrichment. Between CON- and BHB-treated sheep, 11 and 44 genes were differentially expressed (adj. P < 0.05) within the pituitary and hypothalamus, respectively. Functional enrichment analyses revealed BHB altered expression of genes in pathways related to stimulus perception, inflammation, and cell cycle control. The set of genes altered by BHB creates a foundation from which to identify the signaling pathways that impact reproduction during metabolic imbalances.
Journal of Animal Science | 2018
Z. D. McFarlane; E. R. Cope; Jeremy D Hobbs; Renata N Oakes; K. G. Pohler; J. Travis Mulliniks
The objective of this study was to test the effects of protein supplementation strategy and different stockpiled forage species on growth, nutritional status, and reproductive performance of yearling beef heifers. In a 5-yr study, yearling beef heifers (n = 266) were stratified by body weight (BW) at weaning to 1 of 3 stockpiled forages: 1) endophyte-infected tall fescue (TF, Schedonorus arundinaceus (Schreb.) Dumort; 7.21% crude protein [CP] and 67.13% neutral detergent fiber [NDF], dry matter [DM] basis), 2) big bluestem (Andropogon gerardi Vitman) and indiangrass (Sorghastrum nutans L.) combination (BI; 4.32% CP and 71.06% NDF, DM basis), or 3) switchgrass (SG,Panicum virgatum L.; 3.87% CP and 76.79% NDF, DM basis). Forage treatments were then randomly assigned to receive 1 of 2 supplement types: 1) 0.68 kg heifer-1 d-1 of dried distillers grains with solubles (DDGS: 28% CP and 108% total digestible nutrients [TDN]) or 2) 0.22 kg heifer-1 d-1 of blood meal and fish meal (BF: 72.5% CP and 77.5% TDN), resulting in a 3 × 2 factorial arrangement of treatments. Each year, twenty-one 1.2-ha pastures (7 pastures per forage type) were utilized with 2 to 3 heifers per pastures. Treatments were initiated in January and terminated in April at the initiation of breeding. Initial BW was not different (P ≥ 0.22) by forage or supplement type. During the rest of the grazing period, BW was greater (P < 0.01) for TF heifers. However, average daily gain (ADG) was greater (P < 0.01) for BI and SG heifers from breeding to final pregnancy diagnosis. Heifers grazing TF pastures had greater (P < 0.01) overall ADG than their counterparts. The percentage of mature BW (MBW) at breeding was greater (P < 0.01) for TF heifers. Heifer BW and ADG was not influenced (P ≥ 0.06) by supplementation strategy. Serum glucose concentrations were not different (P ≥ 0.44) among forage type or supplement strategy. Pregnancy rates at fixed timed-artificial insemination and overall pregnancy rates did not differ (P ≥ 0.38) by forage or supplement treatment. Owing to forage nutritive value differences, heifers grazing low-quality, warm season grasses lost BW prior to the initiation of the breeding season. However, a negative BW gain prior to breeding did not negatively impact overall pregnancy rates.
Agricultural sciences | 2017
Zach D. McFarlane; Phillip R. Myer; E. R. Cope; Neil D. Evans; T. Carson Bone; Bryan E. Biss; J. Travis Mulliniks
Journal of Animal Science | 2017
J. D. Hobbs; S. R. Edwards; E. R. Cope; Z. D. McFarlane; K. G. Pohler; J. T. Mulliniks
Translational Animal Science | 2017
Z. D. McFarlane; E. R. Cope; J. D. Hobbs; R. N. Oakes; J. T. Mulliniks
Journal of Animal Science | 2017
E. R. Cope; Brynn H. Voy; Meg Staton; Thomas Lane; Jack Davitt; J. T. Mulliniks
Journal of Animal Science | 2016
Z. D. McFarlane; J. D. Hobbs; E. R. Cope; R. L. Nave; J. T. Mulliniks
Journal of Animal Science | 2016
E. R. Cope; Brynn H. Voy; Brian K Whitlock; J. D. Hobbs; Z. D. McFarlane; Suchita Das; J. T. Mulliniks
Journal of Animal Science | 2016
J. T. Mulliniks; E. R. Cope; Z. D. McFarlane; J. D. Hobbs; R. C. Waterman