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Dive into the research topics where Elena S. Lymar is active.

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Featured researches published by Elena S. Lymar.


Molecular and Cellular Biology | 2001

Human STAGA Complex Is a Chromatin-Acetylating Transcription Coactivator That Interacts with Pre-mRNA Splicing and DNA Damage-Binding Factors In Vivo

Ernest Martinez; Vikas B. Palhan; Agneta Tjernberg; Elena S. Lymar; Armin M. Gamper; Tapas K. Kundu; Brian T. Chait; Robert G. Roeder

ABSTRACT GCN5 is a histone acetyltransferase (HAT) originally identified inSaccharomyces cerevisiae and required for transcription of specific genes within chromatin as part of the SAGA (SPT-ADA-GCN5 acetylase) coactivator complex. Mammalian cells have two distinct GCN5 homologs (PCAF and GCN5L) that have been found in three different SAGA-like complexes (PCAF complex, TFTC [TATA-binding-protein-free TAFII-containing complex], and STAGA [SPT3-TAFII31-GCN5L acetylase]). The composition and roles of these mammalian HAT complexes are still poorly characterized. Here, we present the purification and characterization of the human STAGA complex. We show that STAGA contains homologs of most yeast SAGA components, including two novel human proteins with histone-like folds and sequence relationships to yeast SPT7 and ADA1. Furthermore, we demonstrate that STAGA has acetyl coenzyme A-dependent transcriptional coactivator functions from a chromatin-assembled template in vitro and associates in HeLa cells with spliceosome-associated protein 130 (SAP130) and DDB1, two structurally related proteins. SAP130 is a component of the splicing factor SF3b that associates with U2 snRNP and is recruited to prespliceosomal complexes. DDB1 (p127) is a UV-damaged-DNA-binding protein that is involved, as part of a complex with DDB2 (p48), in nucleotide excision repair and the hereditary disease xeroderma pigmentosum. Our results thus suggest cellular roles of STAGA in chromatin modification, transcription, and transcription-coupled processes through direct physical interactions with sequence-specific transcription activators and with components of the splicing and DNA repair machineries.


Molecular and Cellular Biology | 2005

Dual Regulation of c-Myc by p300 via Acetylation-Dependent Control of Myc Protein Turnover and Coactivation of Myc-Induced Transcription

Francesco Faiola; Xiaohui Liu; Szuying Lo; Songqin Pan; Kangling Zhang; Elena S. Lymar; Anthony Farina; Ernest Martinez

ABSTRACT The c-Myc oncoprotein (Myc) controls cell fate by regulating gene transcription in association with a DNA-binding partner, Max. While Max lacks a transcription regulatory domain, the N terminus of Myc contains a transcription activation domain (TAD) that recruits cofactor complexes containing the histone acetyltransferases (HATs) GCN5 and Tip60. Here, we report a novel functional interaction between Myc TAD and the p300 coactivator-acetyltransferase. We show that p300 associates with Myc in mammalian cells and in vitro through direct interactions with Myc TAD residues 1 to 110 and acetylates Myc in a TAD-dependent manner in vivo at several lysine residues located between the TAD and DNA-binding domain. Moreover, the Myc:Max complex is differentially acetylated by p300 and GCN5 and is not acetylated by Tip60 in vitro, suggesting distinct functions for these acetyltransferases. Whereas p300 and CBP can stabilize Myc independently of acetylation, p300-mediated acetylation results in increased Myc turnover. In addition, p300 functions as a coactivator that is recruited by Myc to the promoter of the human telomerase reverse transcriptase gene, and p300/CBP stimulates Myc TAD-dependent transcription in a HAT domain-dependent manner. Our results suggest dual roles for p300/CBP in Myc regulation: as a Myc coactivator that stabilizes Myc and as an inducer of Myc instability via direct Myc acetylation.


Journal of the American Chemical Society | 2008

Gold Nanoparticle Size Controlled by Polymeric Au(I) Thiolate Precursor Size

Raymond P. Briñas; Minghui Hu; Luping Qian; Elena S. Lymar; James F. Hainfeld


Angewandte Chemie | 2007

Assembly of Nanoparticle–Protein Binding Complexes: From Monomers to Ordered Arrays

Minghui Hu; Luping Qian; Raymond P. Briñas; Elena S. Lymar; James F. Hainfeld


Journal of Structural Biology | 2008

Gold nanoparticle-protein arrays improve resolution for cryo-electron microscopy.

Minghui Hu; Luping Qian; Raymond P. Briñas; Elena S. Lymar; Larisa Kuznetsova; James F. Hainfeld


Microscopy and Microanalysis | 2005

5 nm Gold-Ni-NTA Binds His Tags

V Reddy; Elena S. Lymar; Minghui Hu; James F. Hainfeld


MRS Proceedings | 2006

Protein Assembly Through Site-specific Interactions with Gold Nanoparticles

Minghui Hu; Luping Qian; Raymond P. Briñas; Elena S. Lymar; James F. Hainfeld


Microscopy and Microanalysis | 2010

Gold Labeling of Protein Fusion Tags for EM

Jw Dubendorff; Elena S. Lymar; Frederic R. Furuya; James F. Hainfeld


Microscopy and Microanalysis | 2008

Three-dimensional structure of ATP-dependent molecular machine hCHRAC for chromatin remodeling

Minghui Hu; Elena S. Lymar; Y-B Zhang; Luping Qian; Raymond P. Briñas; Larisa Kuznetsova; James F. Hainfeld


Microscopy and Microanalysis | 2007

Nanoparticle-protein Arrays Improve Protein Structural Analysis in Cryo-electron Microscopy

Minghui Hu; Luping Qian; Raymond P. Briñas; Elena S. Lymar; Larisa Kuznetsova; James F. Hainfeld

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James F. Hainfeld

Brookhaven National Laboratory

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Minghui Hu

Brookhaven National Laboratory

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Luping Qian

Brookhaven National Laboratory

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Raymond P. Briñas

Brookhaven National Laboratory

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Francesco Faiola

Chinese Academy of Sciences

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Anthony Farina

University of California

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