Esther Santofimia

Microbial Diversity and Its Relationship to Physicochemical Characteristics of the Water in Two Extreme Acidic Pit Lakes from the Iberian Pyrite Belt (SW Spain)

The Iberian Pyrite Belt (IPB) hosts one of the world’s largest accumulations of acidic mine wastes and pit lakes. The mineralogical and textural characteristics of the IPB ores have favored the oxidation and dissolution of metallic sulfides, mainly pyrite, and the subsequent formation of acidic mining drainages. This work reports the physical properties, hydrogeochemical characteristics, and microbial diversity of two pit lakes located in the IPB. Both pit lakes are acidic and showed high concentrations of sulfate and dissolved metals. Concentrations of sulfate and heavy metals were higher in the Nuestra Señora del Carmen lake (NSC) by one order of magnitude than in the Concepción (CN) lake. The hydrochemical characteristics of NSC were typical of acid mine waters and can be compared with other acidic environments. When compared to other IPB acidic pit lakes, the superficial water of CN is more diluted than that of any of the others due, probably, to the strong influence of runoff water. Both pit lakes showed chemical and thermal stratification with well defined chemoclines. One particular characteristic of NSC is that it has developed a chemocline very close to the surface (2 m depth). Microbial community composition of the water column was analyzed by 16S and 18S rRNA gene cloning and sequencing. The microorganisms detected in NSC were characteristic of acid mine drainage (AMD), including iron oxidizing bacteria (Leptospirillum, Acidithiobacillus ferrooxidans) and facultative iron reducing bacteria and archaea (Acidithiobacillus ferrooxidans, Acidiphilium, Actinobacteria, Acidimicrobiales, Ferroplasma) detected in the bottom layer. Diversity in CN was higher than in NSC. Microorganisms known from AMD systems (Acidiphilium, Acidobacteria and Ferrovum) and microorganisms never reported from AMD systems were identified. Taking into consideration the hydrochemical characteristics of these pit lakes and the spatial distribution of the identified microorganisms, a model explaining their geomicrobiology is advanced.

Pyrosequencing-Based Assessment of the Microbial Community Structure of Pastoruri Glacier Area (Huascarán National Park, Perú), a Natural Extreme Acidic Environment

The exposure of fresh sulfide-rich lithologies by the retracement of the Nevado Pastoruri glacier (Central Andes, Perú) is increasing the presence of heavy metals in the water as well as decreasing the pH, producing an acid rock drainage (ARD) process in the area. We describe the microbial communities of an extreme ARD site in Huascarán National Park as well as their correlation with the water physicochemistry. Microbial biodiversity was analyzed by FLX 454 sequencing of the 16S rRNA gene. The suggested geomicrobiological model of the area distinguishes three different zones. The proglacial zone is located in the upper part of the valley, where the ARD process is not evident yet. Most of the OTUs detected in this area were related to sequences associated with cold environments (i.e., psychrotolerant species of Cyanobacteria or Bacteroidetes). After the proglacial area, an ARD-influenced zone appeared, characterized by the presence of phylotypes related to acidophiles (Acidiphilium) as well as other species related to acidic and cold environments (i.e., acidophilic species of Chloroflexi, Clostridium and Verrumicrobia). Sulfur- and iron-oxidizing acidophilic bacteria (Acidithiobacillus) were also identified. The post-ARD area was characterized by the presence of OTUs related to microorganisms detected in soils, permafrost, high mountain environments, and deglaciation areas (Sphingomonadales, Caulobacter or Comamonadaceae).

Metal retention, mineralogy, and design considerations of a mature permeable reactive barrier (PRB) for acidic mine water drainage in Northumberland, U.K.

Abstract Mineralogical characterization of the precipitates developed in passive systems treating minepolluted waters is an essential tool to fully understand and control the removal processes taking place in these systems. In 2008, after five years of operation, a section of the permeable reactive barrier (PRB) at Shilbottle, Northumberland, was subjected to a low intrusive/non-destructive solid sampling. These solid samples were mineralogically characterized by XRD, ESEM-EDS, and sequential extractions. In addition to the solid sampling, 44 water samples obtained in the PRB from January 2004 to August 2009 were used to study the mineral stability of some selected phases in these waters. It was observed that the main iron phases in the PRB were those associated with mineral phases typically developed in non-reducing environments (schwertmannite and goethite), while the presence of a significant amount of pyrite was also observed. The low residence time of the water within the PRB (from 10 to 40 h) appears to be the reason for the absence of a more reducing and less acidic environment in the reactive substrate. An increase of residence time in the PRB, by increasing reactive mixture porosity and resizing the PRB, changes in the reactive material employed (smaller limestone grain size and inclusion of zerovalent iron) and changes in the PRB design (isolating top layer and forced homogeneous flow upward through all the reactive material) are proposed for future reconditioning of the system.

Comparative microbial ecology of the water column of an extreme acidic pit lake, Nuestra Señora del Carmen, and the Río Tinto basin (Iberian Pyrite Belt)

Summary. The Iberian Pyrite Belt, located in Southwestern Spain, represents one of the world’s largest accumulations of mine wastes and acid mine drainages. This study reports the comparative microbial ecology of the water column of Nuestra Senora del Carmen acid pit lake with the extreme acidic Rio Tinto basin. The canonical correspondence analysis identified members of the Leptospirillum, Acidiphilium, Metallibacterium, Acidithiobacillus, Ferrimicrobium and Acidisphaera genera as the most representative microorganisms of both ecosystems. The presence of archaeal members is scarce in both systems. Only sequences clustering with the Thermoplasmata have been retrieved in the bottom layer of Nuestra Senora del Carmen and one station of Rio Tinto. Although the photosynthetically active radiation values measured in this lake upper layer were low, they were sufficient to activate photosynthesis in acidophilic microorganisms. All identified photosynthetic microorganisms in Nuestra Senora del Carmen (members of the Chlamydomonas, Zygnemopsis and Klebsormidium genera) are major members of the photosynthetic eukaryotic community characterized in Rio Tinto basin. This study demonstrates a close relationship between the microbial diversity of Nuestra Senora del Carmen pit lake and the diversity detected in the Rio Tinto basin, which underlain the influence of the shared mineral substrates in the microbial ecology of these ecosystems. [Int Microbiol 2014; 17(4):225233]

A Case Study of Geometric Modelling via 3-D Point Interpolation for the Bathymetry of the Rabasa Lakes (Alicante, Spain)

The interpolation of points by means of Information Technology programs appears as a technical tool of some relevancy in the hydrogeology in general and in the study of the humid zones in particular. Our approach has beenthe determination of the 3-D geometry of the humid zones of major depth of the Rabasa Lakes. To estimate the topography of the lake bed, we proceed to acquire information in the field by means of sonar and GPS equipment. A total of 335 points were measured both on the perimeter and in the lake bed. In a second stage, this information was used in a kriging program to obtain the bathymetry of the wetland. This methodology is demonstrated as one of the most reliable and cost-efficient for the 3-D analysis of this type of water masses. The bathymetric study of the zone allows us to characterize the mid- and long-term hydrological evolution of the lakes by means of depth-area-volume curves.

Microbial Ecology in Extreme Acidic Pit Lakes from the Iberian Pyrite Belt (SW Spain)

Abstract. In mining areas in which sulfur-containing ores are exposed, the oxidation of sulfides leads to the formation of acidic mine drainage (AMD) waters. Both traditional and molecular microbial studies have shown that chemolithotrophic sulfur- and iron-oxidizing bacteria are responsible for this activity. The Iberian Pyrite Belt (IPB), located in southwestern Spain represents one of the world’s largest accumulations of mine wastes and AMD waters. Mineralogical and textural characteristics of the IPB ores favor the oxidation and dissolution of pyrite and the subsequent formation of AMD waters. Acidic pit lakes in the IPB are a hotspot for this activity. These pit lakes are former open pit mines where ores have been exposed leading the formation of AMD waters. At present, there are more than 25 of these pit lakes between the provinces of Huelva and Seville (SW Spain). This work reports the physical properties, hydrogeochemical characteristics, and microbial diversity of two pit lakes located in the IPB Nuestra Señora del Carmen (NSC), and Concepción (CN). Both pit lakes are acid (pH 2-4) and showed chemical and thermal stratification with well defined chemoclines. One particular characteristic of NSC is that it has developed a chemocline very close to the surface (2 m depth). Microbial community composition of the water column was analyzed by 16S and 18S rRNA gene cloning and sequencing. The microorganisms detected in NSC are characteristic of acid mine drainage (AMD), including iron oxidizing bacteria (Leptospirillum) and facultative iron reducing bacteria and archaea (Acidithiobacillus ferrooxidans, Actinobacteria, Acidimicrobiales, Ferroplasma) detected in the bottom layer. Diversity in CN was higher than in NSC. Microorganisms known from AMD systems (Acidiphilium, Acidobacteria and Ferrovum) and microorganisms never reported from AMD systems were both identified.

Main characteristics of ponds associated with gypsum karst aquifer in the Arcas pond complex (Cuenca, Spain)

The Arcas pond complex in Cuenca (Spain) develops within an interstratified karst system that affects gypsum deposits of the Cretaceous-Tertiary transition period. The formation of this complex is influenced by fracturing, which acts both as the preferential pathway for groundwater movement and the connecting and upward flow mechanism across aquifer formations. Such fracturing also favors the development of karst morphologies in the form of collapse dolines that are connected to the aquifer and which display a permanent character. Hydrochemical studies have allowed the identification of four types of ponds that show varying degrees of behavior and connection with the confined gypsum aquifer. Evaporation, oversaturation and gypsum and limestone mud precipitation processes take place in the more disconnected ponds. The study of the annual evolution of the water column in two of the ponds that show differing degrees of connection with the groundwater allows for an evaluation of the manner in which groundwater influences the stratification/mixing processes that take place in such ponds, and of the physico-chemical characteristics governed by these processes.

Geomorphological Characteristics of the Karst-Related Lakes in Gypsum in the Arcas and River Moscas Lake Complexes (Cuenca Province)

The Arcas and River Moscas lake complexes, protected natural areas in Cuenca province, are located in interstratified karst developed in Cretaceous-Tertiary boundary gypsum. These sites are in the central part of the province, near the town of Cuenca, each covering an area of some 3 km2 and distributed between the municipalities of Arcas del Villar, Cuenca, Fuentes, Valdetortola and Villar de Olalla. This paper presents certain geomorphological aspects established in the framework of a broader study on the hydrogeology of the two complexes, fed chiefly by groundwater discharge from this gypsiferous aquifer, whose hydrodynamic behaviour is determined by its fractures and faults.