Fabien Cremona

Dynamic carbon budget of a large shallow lake assessed by a mass balance approach

To study the role of large and shallow hemiboreal lakes in carbon processing, we calculated a 3-year carbon mass balance for Lake Võrtsjärv (Estonia) based on in situ measurements. This balance took into account hydrological and biogeochemical processes affecting dissolved inorganic (DIC), dissolved organic (DOC) and particulate organic (POC) carbon species. Accumulation varied greatly on a seasonal and yearly basis. The lake exported carbon during most of the year except during spring floods and in late autumn. In-lake processes were responsible for exporting POC and storing DOC while DIC switched between storage and export. The carbon cycle was alternatively dominated in 2009 by biogeochemical processes and in 2011 by riverine fluxes, whereas in 2010 the two process types were of the same magnitude. These results suggest that the role of large shallow lakes like Võrtsjärv in the global C cycle is equally driven by hydrological factors, in particular seasonal water level changes, and by biogeochemical in-lake reactions.

Benthic foodweb structure in a large shallow lake studied by stable isotope analysis

Abstract: The benthic foodweb structure of Lake Võrtsjärv, a large (270 km2), shallow, and turbid Estonian lake, was evaluated based on C and N stable-isotope signatures (&dgr;13C, &dgr;15N). Variation in &dgr;13C between sampling sites was not related to site proximity to the littoral zone or the more vegetated southern part of the lake, but rather appeared to be influenced by in-situ site peculiarities. &dgr;13C was stable temporally and between functional feeding groups, a result implying that the whole benthic food web of the lake relies largely on the same C source admixture, essentially particulate organic matter (POM). Thus, the foodweb composition of Lake Võrtsjärv is remarkably homogeneous given the lakes large surface area. Apparent trophic-level &dgr;15N fractionation between total collectors and total predators (mean 1.7‰) was lower than the value of 3.4‰ generally adopted in foodweb studies, but the higher value was valid for specific prey—predator links. The low &dgr;13C signature of some chironomid samples indicated probable assimilation of methane-oxidizing bacteria (MOB) by these sediment-dwelling invertebrates. However, the lack of similar 13C depletion in benthic filterers (mussels) indicated that the MOB layer is essentially confined to the sediments and does not reach the water column, which probably constrains transfer of methane-derived C through the food web to fish in this lake. Our study demonstrates that the benthic food web of shallow turbid lakes like Võrtsjärv is simplified and is mostly sustained by phytoplanktonic C sources.

Role of a productive lake in carbon sequestration within a calcareous catchment

For a long time, lakes were considered unimportant in the global carbon (C) cycle because of their small total area compared to the ocean. Over the last two decades, a number of studies have highlighted the important role of lakes in both sequestering atmospheric C and modifying the C flux from the catchment by degassing CO2 and methane and burying calcite and organic matter in the sediment. Based on a full C mass balance, high frequency measurements of lake metabolism and stable isotope analysis of a large shallow eutrophic lake in Estonia, we assess the role alkaline lakes play in augmenting the strength of terrestrial carbonate weathering as a temporary CO2 sink. We show that a large part of organic C buried in the sediments in this type of lakes originates from the catchment although a direct uptake from the atmosphere during periods of intensive phytoplankton growth in eutrophic conditions contributes to the carbon sink.

From bacteria to piscivorous fish: estimates of whole-lake and component-specific metabolism with an ecosystem approach.

The influence of functional group specific production and respiration patterns on a lakes metabolic balance remains poorly investigated to date compared to whole-system estimates of metabolism. We employed a summed component ecosystem approach for assessing lake-wide and functional group-specific metabolism (gross primary production (GPP) and respiration (R)) in shallow and eutrophic Lake Võrtsjärv in central Estonia during three years. Eleven functional groups were considered: piscivorous and benthivorous fish; phyto-, bacterio-, proto- and metazooplankton; benthic macroinvertebrates, bacteria and ciliates; macrophytes and their associated epiphytes. Metabolism of these groups was assessed by allometric equations coupled with daily records of temperature and hydrology of the lake and measurements of food web functional groups biomass. Results revealed that heterotrophy dominated most of the year, with a short autotrophic period observed in late spring. Most of the metabolism of the lake could be attributed to planktonic functional groups, with phytoplankton contributing the highest share (90% of GPP and 43% of R). A surge of protozooplankton and bacterioplankton populations forming the microbial loop caused the shift from auto- to heterotrophy in midsummer. Conversely, the benthic functional groups had overall a very small contribution to lake metabolism. We validated our ecosystem approach by comparing the GPP and R with those calculated from O2 measurements in the lake. Our findings are also in line with earlier productivity studies made with 14C or chlorophyll a (chl-a) based equations. Ideally, the ecosystem approach should be combined with diel O2 approach for investigating critical periods of metabolism shifts caused by dynamics in food-web processes.

Is the future of large shallow lakes blue-green? Comparing the response of a catchment-lake model chain to climate predictions

We constructed a model chain into which regional climate-related variables (air temperature, precipitation) and a lake’s main tributary hydrological indicators (river flow, dissolved inorganic carbon) were employed for predicting the evolution of planktonic blue-green algae (cyanobacteria) and zooplankton (rotifer) biomass in that lake for the mid-21st century. Simulations were based on the future climate predicted under both the Representative Concentration Pathways 4.5 and 8.5 scenarios which, combined with three realistic policy-making and basin land-use evolution lead to six scenarios for future water quality. Model outputs revealed that mean annual river flow is expected to decline between 3 and 20%, depending on the scenario. Concentration of river dissolved inorganic carbon is predicted to follow the opposite trend and might soar up to twice the 2005–2014 average concentration. Lake planktonic primary producers will display quantitative changes in the future decades whereas zooplankters will not. A 2 to 10% increase in mean cyanobacteria biomass is accompanied by a stagnation (−3 to +2%) of rotifer biomass. Changes in cyanobacteria and rotifer phenology are expected: a surge of cyanobacteria biomass in winter and a shortening of the rotifer biomass spring peak. The expected quantitative changes on the biota were magnified in those scenarios where forested area conversions to cropland and water abstraction were the greatest.

Numerical Exploration of the Planktonic to Benthic Primary Production Ratios in Lakes of the Baltic Sea Catchment

Autotrophic structure refers to the partitioning of whole-ecosystem primary production between benthic and planktonic primary producers. Autotrophic structure remains poorly understood especially because of the paucity of estimates regarding benthic primary production. We used a conceptual model for numerically exploring the autotrophic structure of 13 hemiboreal lakes situated in the Baltic Sea catchment. We also used diel variations in primary production profiles to graphically evaluate levels of light and/or nutrient limitation in lakes. The input morphometric data, light extinction coefficients and dissolved carbon parameters were mostly obtained from in situ measurements. Results revealed that cross- and within-lake autotrophic structure varied greatly: one lake was clearly dominated by benthic production, and three lakes by phytoplankton production. In the rest, phytoplankton production was generally dominant but switch to benthic dominance was possible. The modelled primary production profiles varied according to lake water clarity and bathymetry. Our results clearly indicate that the relative contribution of benthic primary production to whole-lake primary production should be taken into account in studies about hemiboreal and boreal lakes.

Factors controlling the three-decade long rise in cyanobacteria biomass in a eutrophic shallow lake

We aimed at quantifying the importance of limnological variables in the decadal rise of cyanobacteria biomass in shallow hemiboreal lakes. We constructed estimates of cyanobacteria (blue-green algae) biomass in a large, eutrophic lake (Estonia, Northeastern Europe) from a database comprising 28 limnological variables and spanning more than 50years of monitoring. Using a dual-model approach consisting in a boosted regression trees (BRT) followed by a generalized least squares (GLS) model, our results revealed that six variables were most influential for assessing the variance of cyanobacteria biomass. Cyanobacteria response to nitrate concentration and rotifer abundance was negative, whereas it was positive to pH, temperature, cladoceran and copepod biomass. Response to total phosphorus (TP) and total phosphorus to total nitrogen ratio was very weak, which suggests that actual in-lake TP concentration is still above limiting values. The most efficient GLS model, which explained nearly two thirds (r2=0.65) of the variance of cyanobacteria biomass included nitrate concentration, water temperature and pH. The very high number of observations (maximum n=525) supports the robustness of the models. Our results suggest that the decadal rise of blue-green algae in shallow lakes lies in the interaction between cultural eutrophication and global warming which bring in-lake physical and chemical conditions closer to cyanobacteria optima.

An estimation of diel metabolic rates of eight limnological archetypes from Estonia using high-frequency measurements

Abstract We employed a Bayesian model to assess the metabolic state of 8 Estonian lakes representing the 8 lake types according to the European Union Water Framework Directive. We hypothesized that long-term averages of light-related variables would be better predictors of lake metabolism than nutrient-related variables. Model input parameters were in situ high-frequency measurements of dissolved oxygen, temperature, and irradiance. Model simulations were conducted for several (5–12) diel cycles for each lake during the summer season. Accounting for uncertainty, the results from the Bayesian model revealed that 2 lakes were autotrophic for the duration of the experiment, 1 was heterotrophic, and 5 were balanced or had an ambiguous metabolic state. Cross-comparison with a traditional bookkeeping model showed that the majority of lakes were in metabolic balance. A strong coupling between primary production and respiration was observed, with the share of autochthonous primary production respired by consumers increasing with light extinction and nutrient-related variables. Unlike gross primary production, community respiration was strongly related to light extinction, dissolved organic carbon (DOC) and total phosphorus. These findings suggest that a drastic decrease in light-limited primary production along the DOC gradient counter-balanced nutrient supply in the darker lakes and thus blurred the relationship between primary production and nutrients. Thus, contrary to our hypothesis, both light and nutrient-related variables seemed to be good predictors of lake respiration and its coupling to lake primary production.

Effects of warming and nutrients on the microbial food web in shallow lake mesocosms

We analysed changes in the abundance, biomass and cell size of the microbial food web community (bacteria, heterotrophic nanoflagellates, ciliates) at contrasting nutrient concentrations and temperatures during a simulated heat wave. We used 24 mesocosms mimicking shallow lakes in which two nutrient levels (unenriched and enriched by adding nitrogen and phosphorus) and three different temperature scenarios (ambient, IPCC A2 scenario and A2+%50) are simulated (4 replicates of each). Experiments using the mesocosms have been running un-interrupted since 2003. A 1-month heat wave was imitated by an extra 5 °C increase in the previously heated mesocosms (from 1st July to 1st August 2014). Changes in water temperature induced within a few days a strong effect on the microbial food web functioning, demonstrating a quick response of microbial communities to the changes in environment, due to their short generation times. Warming and nutrients showed synergistic effects. Microbial assemblages of heterotrophic nanoflagellates and ciliates responded positively to the heating, the increase being largest in the enriched mesocosms. The results indicate that warming and nutrients in combination can set off complex interactions in the microbial food web functioning.