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Featured researches published by Fatima Mir.


Lancet Infectious Diseases | 2013

Antibiotic resistance—the need for global solutions

Ramanan Laxminarayan; Adriano Duse; Chand Wattal; Anita K. M. Zaidi; Heiman Wertheim; Nithima Sumpradit; Erika Vlieghe; Gabriel Levy Hara; Ian M. Gould; Herman Goossens; Christina Greko; Anthony D. So; Maryam Bigdeli; Goeran Tomson; Will Woodhouse; Eva Ombaka; Arturo Quizhpe Peralta; Farah Naz Qamar; Fatima Mir; Sam Kariuki; Zulfigar A. Bhutta; Anthony R. M. Coates; Richard Bergstrom; Gerard D. Wright; Eric D. Brown; Otto Cars

The causes of antibiotic resistance are complex and include human behaviour at many levels of society; the consequences affect everybody in the world. Similarities with climate change are evident. Many efforts have been made to describe the many different facets of antibiotic resistance and the interventions needed to meet the challenge. However, coordinated action is largely absent, especially at the political level, both nationally and internationally. Antibiotics paved the way for unprecedented medical and societal developments, and are today indispensible in all health systems. Achievements in modern medicine, such as major surgery, organ transplantation, treatment of preterm babies, and cancer chemotherapy, which we today take for granted, would not be possible without access to effective treatment for bacterial infections. Within just a few years, we might be faced with dire setbacks, medically, socially, and economically, unless real and unprecedented global coordinated actions are immediately taken. Here, we describe the global situation of antibiotic resistance, its major causes and consequences, and identify key areas in which action is urgently needed.


The Lancet Global Health | 2017

Simplified antibiotic regimens for treatment of clinical severe infection in the outpatient setting when referral is not possible for young infants in Pakistan (Simplified Antibiotic Therapy Trial [SATT]): a randomised, open-label, equivalence trial

Fatima Mir; Imran Nisar; Shiyam Sundar Tikmani; Benazir Baloch; Sadia Shakoor; Fyezah Jehan; Imran Ahmed; Simon Cousens; Anita K. M. Zaidi

Summary Background Parenteral antibiotic therapy for young infants (aged 0–59 days) with suspected sepsis is sometimes not available or feasible in countries with high neonatal mortality. Outpatient treatment could save lives in such settings. We aimed to assess the equivalence of two simplified antibiotic regimens, comprising fewer injections and oral rather than parenteral administration, compared with a reference treatment for young infants with clinical severe infection. Methods We undertook the Simplified Antibiotic Therapy Trial (SATT), a three-arm, randomised, open-label, equivalence trial in five communities in Karachi, Pakistan. We enrolled young infants (aged 0–59 days) who either presented at a primary health-care clinic or were identified by a community health worker with signs of clinical severe infection. We included infants who were not critically ill and whose family refused admission. We randomly assigned infants to either intramuscular procaine benzylpenicillin and gentamicin once a day for 7 days (reference); oral amoxicillin twice daily and intramuscular gentamicin once a day for 7 days; or intramuscular procaine benzylpenicillin and gentamicin once a day for 2 days followed by oral amoxicillin twice daily for 5 days. The primary outcome was treatment failure within 7 days of enrolment and the primary analysis was per protocol. We judged experimental treatments as efficacious as the reference if the upper bound of the 95% CI for the difference in treatment failure was less than 5·0. This trial is registered at ClinicalTrials.gov, number NCT01027429. Findings Between Jan 1, 2010, and Dec 26, 2013, 2780 infants were deemed eligible for the trial, of whom 2453 (88%) were enrolled. Because of inadequate clinical follow-up or treatment adherence, 2251 infants were included in the per-protocol analysis. 820 infants (747 per protocol) were assigned the reference treatment of procaine benzylpenicillin and gentamicin, 816 (751 per protocol) were allocated amoxicillin and gentamicin, and 817 (753 per protocol) were assigned procaine benzylpenicillin, gentamicin, and amoxicillin. Treatment failure within 7 days of enrolment was reported in 90 (12%) infants who received procaine benzylpenicillin and gentamicin (reference), 76 (10%) of those given amoxicillin and gentamicin (risk difference with reference −1·9, 95% CI −5·1 to 1·3), and 99 (13%) of those treated with procaine benzylpenicillin, gentamicin, and amoxicillin (risk difference with reference 1·1, −2·3 to 4·5). Interpretation Two simplified antibiotic regimens requiring fewer injections are equivalent to a reference treatment for young infants with signs of clinical severe infection but without signs of critical illness. The use of these simplified regimens has the potential to increase access to treatment for sick young infants who cannot be referred to hospital. Funding The Saving Newborn Lives initiative of Save the Children, through support from the Bill & Melinda Gates, and by WHO and USAID.


Emerging Health Threats Journal | 2015

Hospital preparedness in community measles outbreaks - challenges and recommendations for low-resource settings

Sadia Shakoor; Fatima Mir; Anita K. M. Zaidi; Afia Zafar

We have reviewed various strategies involved in containment of measles in healthcare facilities during community outbreaks. The strategies that are more applicable to resource-poor settings, such as natural ventilation, mechanical ventilation with heating and air-conditioning systems allowing unidirectional air-flow, and protection of un-infected patients and healthcare workers (HCWs), have been examined. Ventilation methods need innovative customization for resource-poor settings followed by validation and post-implementation analysis for impact. Mandatory vaccination of all HCWs with two doses of measles-containing vaccine, appropriate post-exposure prophylaxis of immunocompromised inpatients, and stringent admission criteria for measles cases can contribute toward reduction of nosocomial and secondary transmission within facilities.


Primary & Acquired Immunodeficiency Research | 2014

Recurrent Salmonellosis in a Child with Complete IL-12Rβ1 Deficiency.

Mohammad Faizan Zahid; Syed Asad Ali; Fyezah Jehan; Abdul Gaffar Billo; Jean-Laurent Casanova; Jacinta Bustamante; Stéphanie Boisson-Dupuis; Fatima Mir

A 3 year old boy presented with fever, abdominal pain and cervical lymphadenopathy. He had previously been treated empirically with anti-tuberculous therapy twice, at age 9 months and 27 months, for peripheral lymphadenopathy. An older sibling died of suspected tuberculous meningitis. Mantoux test was normal. Bone marrow and lymph node biopsy ruled out lymphoma and absolute neutrophil and lymphocyte counts were normal. Blood and lymph node cultures were positive for Salmonella typhi. The childs symptoms resolved with IV ceftriaxone and he was discharged. Over the next 2 years, the child was admitted every 2-3 months for culture positive S. typhi bacteremia with complaints of fever, abdominal distention and dysentery. HIV workup was negative. A prolonged course of probenicid and high dose amoxicillin increased interval between episodes to 4-5 months only. Cholecystectomy was debated and deferred due to suspicion of immunodeficiency. Blood samples from patient and parents were sent to France for workup and IL-12Rβ1 deficiency was found. Parental counseling and subsequent patient management remained difficult in view of financial constraints and outstation residence of family. At age 7 years, the child presented with small bowel obstruction. He was managed conservatively with antibiotics, IV fluids and blood transfusions, but eventually succumbed to endotoxic shock. This case highlights the importance of considering IL-12Rβ1 deficiency in children with repeated salmonellosis, a diagnosis which precludes intensive and aggressive monitoring and management of the patient in scenarios where bone marrow transplants are not feasible.


Reproductive Health | 2016

The development and evaluation of a community-based clinical diagnosis tool and treatment regimen for postpartum sepsis in Bangladesh and Pakistan.

Linda Bartlett; Amnesty LeFevre; Fatima Mir; Sajid Soofi; S. Arif; Dipak K. Mitra; M. A. Quaiyum; Sadia Shakoor; Mohammad Shahidul Islam; Nicholas E Connor; Peter J. Winch; Megan E. Reller; Rasheduzzaman Shah; S El Arifeen; Abdullah H. Baqui; Zulfigar A. Bhutta; Anita K. M. Zaidi; Shampa Saha; Salahuddin Ahmed

BackgroundPostpartum sepsis accounts for most maternal deaths between three and seven days postpartum, when most mothers, even those who deliver in facilities, are at home. Case fatality rates for untreated women are very high. Newborns of ill women have substantially higher infection risk.Methods/DesignThe objectives of this study are to: (1) create, field-test and validate a tool for community health workers to improve diagnostic accuracy of suspected puerperal sepsis; (2) measure incidence and identify associated risk factors and; (3) describe etiologic agents responsible and antibacterial susceptibility patterns. This prospective cohort study builds on the Aetiology of Neonatal Infection in South Asia study in three sites: Sylhet, Bangladesh and Karachi and Matiari, Pakistan. Formative research determined local knowledge of symptoms and signs of postpartum sepsis, and a systematic literature review was conducted to design a diagnostic tool for community health workers to use during ten postpartum home visits. Suspected postpartum sepsis cases were referred to study physicians for independent assessment, which permitted validation of the tool. Clinical specimens, including urine, blood, and endometrial material, were collected for etiologic assessment and antibiotic sensitivity. All women with puerperal sepsis were given appropriate antibiotics.DiscussionThis is the first large population-based study to expand community-based surveillance for diagnoses, referral and treatment of newborn sepsis to include maternal postpartum sepsis. Study activities will lead to development and validation of a diagnostic tool for use by community health workers in resource-poor countries. Understanding the epidemiology and microbiology of postpartum sepsis will inform prevention and treatment strategies and improve understanding of linkages between maternal and neonatal infections.


Archives of Disease in Childhood | 2015

Are TB control programmes in South Asia ignoring children with disease? A situational analysis

Sadia Shakoor; Farah Naz Qamar; Fatima Mir; Anita K. M. Zaidi; Rumina Hasan

Paediatric tuberculosis (TB) has long been an evasive entity for public health practitioners striving to control the disease. Owing to difficulty in diagnosis of paediatric TB, incidence estimates based on current case detection fall short of actual rates. The four high-burden countries in South Asia (SA-HBC)—Afghanistan, Pakistan, India and Bangladesh—alone account for >75% of missed TB cases worldwide. It follows that these countries are also responsible for a large although unmeasured proportion of missed paediatric cases. In view of current Millennium Development Goals recommending a scale-up of paediatric TB detection and management globally, there is a dire need to improve paediatric TB programmes in these high-burden countries. Inherent problems with diagnosis of paediatric TB are compounded by programmatic and social barriers in SA-HBC. We have reviewed the current situation of TB control programmes in SA-HBC countries based on published statistics and performed a strengths, weaknesses, opportunities and threats situational analysis with a view towards identifying critical issues operant in the region posing barriers to improving paediatric TB control.


Archive | 2010

Hospital Infections by Antimicrobial-Resistant Organisms in Developing Countries

Fatima Mir; Anita K. M. Zaidi

Antimicrobial resistance is a global public health concern. Hospitals in developing countries are fighting a progressively uphill battle against not only high burden of infectious diseases but also an ever-increasing proportion of multidrug-resistant pathogens. As many as 56% of Staphylococcus aureus isolates from hospital-acquired infections in South Asia have now become methicillin resistant. Vancomycin-resistant enterococci (VRE), with a reported prevalence of 6–12% in Asian hospital-based studies account for 10% of nosocomial urinary tract infections and a 31% mortality rate with VRE bacteremias. Third-generation cephalosporin-resistant Escherichia coli and Klebsiella account for case fatality rates between 12 and 52% in neonatal inpatients. Pan-resistance has been reported in 14–35.8% isolates of Acinetobacter spp. from developing country hospital inpatients over the last decade. Pseudomonas spp., an important neonatal killer in the Indo-Pak subcontinent, is ceftazidime resistant in 34–55% isolates and aminoglycoside resistant in 23–69% isolates. Alarmingly, these figures show a rising temporal trend and highlight antimicrobial-resistant organisms as major, untreatable threats in many resource-constrained countries. Antimicrobial resistance does not only mean increasing expense of treatment and poor clinical outcomes but also has a major impact on the way health systems are perceived and therefore accessed. There is an urgent need to devise comprehensive strategies and programs for improving hospital infection control and containing antimicrobial resistance in developing countries.


Case reports in pediatrics | 2015

Abdominal Lymphonodular Cryptococcosis in an Immunocompetent Child

Mehjabeen Zaidi; Sonia Qureshi; Sadia Shakoor; Saira Fatima; Fatima Mir

We describe our experience with an apparently immunocompetent child presenting with pyrexia of unknown origin without focal signs. Investigations revealed lymphadenopathy at lung hila, mesentery, and porta hepatis. The child had received at least two months of empiric antituberculous therapy (ATT) before she came to us. A CT-guided biopsy revealed granulomatous inflammation. PAS stain showed yeasts which stained blue with Alcian blue, suggesting C. neoformans.


Mycopathologia | 2013

Madurella Mycetomatis as an Agent of Brain Abscess: Case Report and Review of Literature

Fatima Mir; Sadia Shakoor; M. Khan; Khurram Minhas; Afia Zafar; Anita K. M. Zaidi

Fungal cerebral abscesses are rare and usually seen in immunocompromised individuals. We report a case and review published literature of Madurella mycetomatis as an agent of cerebral abscess. We found contiguous head and neck infections to be the principal cause of cerebral maduromycosis caused by M. mycetomatis. Early recognition of Madurella spp. as the causative agent is essential to avoid cerebral spread.


The Journal of Allergy and Clinical Immunology | 2018

Human primary immunodeficiency caused by expression of a kinase-dead p110δ mutant

Sarah Beaussant Cohen; Wayne Bainter; Jared L. Johnson; Ting-Yu Lin; Jenny C.Y. Wong; Jacqueline Wallace; Jennifer Jones; Fatima Mir; Farah Naz Qamar; Lewis C. Cantley; Raif S. Geha; Janet Chou

This case demonstrates the essential contribution of the p110δ catalytic domain in adaptive immunity function in a patient with expression of a kinase-dead p110δ mutant.

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