Faustino Siñeriz

Thermostable alkaline proteases of Bacillus licheniformis MIR 29: isolation, production and characterization

Abstract Bacillus licheniformis MIR 29 has been isolated and produces extracellular proteases. It is able to grow at temperatures up to 60 °C and at pH values up to 9.0. Casein was the best carbon source for production of a thermostable protease activity which, in some conditions, is 90% extracellular. The synthesis of alkaline protease is not constitutive; different levels of production were found with different carbon and nitrogen sources. Casein was thought to be an inducer of enzyme synthesis. The optimal pH and temperature of the enzyme activity were 12 °C and 60 °C, respectively. The enzyme was stable up to 60 °C in the absence of stabilizers. The protease activity was inhibited with phenylmethylsulphonyl fluoride, indicating a serine-protease activity. The proteolytic activity was lowered by molecules present in the culture supernatant, which include amino acids and peptides, indicating end-product inhibition. Electrophoresis assay on denaturating gels showed two bands with alkaline protease activity, in the 25 to 40-kDa molecular mass range.

Diverse responses to UV-B radiation and repair mechanisms of bacteria isolated from high-altitude aquatic environments.

ABSTRACT Acinetobacter johnsonii A2 isolated from the natural community of Laguna Azul (Andean Mountains at 4,560 m above sea level), Serratia marcescens MF42, Pseudomonas sp. strain MF8 isolated from the planktonic community, and Cytophaga sp. strain MF7 isolated from the benthic community from Laguna Pozuelos (Andean Puna at 3,600 m above sea level) were subjected to UV-B (3,931 J m−2) irradiation. In addition, a marine Pseudomonas putida strain, 2IDINH, and a second Acinetobacter johnsonii strain, ATCC 17909, were used as external controls. Resistance to UV-B and kinetic rates of light-dependent (UV-A [315 to 400 nm] and cool white light [400 to 700 nm]) and -independent reactivation following exposure were determined by measuring the survival (expressed as CFU) and accumulation of cyclobutane pyrimidine dimers (CPD). Significant differences in survival after UV-B irradiation were observed: Acinetobacter johnsonii A2, 48%; Acinetobacter johnsonii ATCC 17909, 20%; Pseudomonas sp. strain MF8, 40%; marine Pseudomonas putida strain 2IDINH, 12%; Cytophaga sp. strain MF7, 20%; and Serratia marcescens, 21%. Most bacteria exhibited little DNA damage (between 40 and 80 CPD/Mb), except for the benthic isolate Cytophaga sp. strain MF7 (400 CPD/Mb) and Acinetobacter johnsonii ATCC 17909 (160 CPD/Mb). The recovery strategies through dark and light repair were different in all strains. The most efficient in recovering were both Acinetobacter johnsonii A2 and Cytophaga sp. strain MF7; Serratia marcescens MF42 showed intermediate recovery, and in both Pseudomonas strains, recovery was essentially zero. The UV-B responses and recovery abilities of the different bacteria were consistent with the irradiation levels in their native environment.

Purification and characterization of a thermostable xylanase from Bacillus amyloliquefaciens

Abstract A Bacillus amyloliquefaciens strain isolated from soil produced xylanolytic enzymes in the extracellular medium when grown on xylan and nitrate. No cellulase activity was detected. Xylanase was purified from the culture supernatant in three steps which comprised anion-exchange adsorption, ammonium sulfate precipitation, and hydrophobic interaction chromatography. The pure enzyme appeared as two close protein bands on SDS-PAGE with molecular weights of 18.4 and 19.6 kD, respectively. The molecular weight obtained by sedimentation equilibrium under native conditions was about 18.5 kD. The isoelectric point was 10.1. The enzyme contains a relatively high content of aspartate, glycine, and threonine. Tryptophan seems to be essential for xylanase activity. The presence of carbohydrate was noted in the pure enzyme. Circular dichroism studies indicated that the protein contains almost equal proportions of α-helix, β-sheet, and β-turns. The optimum pH of activity was 6.8–7.0. The enzyme exhibited good stability even at pH 9.0. Excellent stability was observed at 50°C even though optimal activity was at 80°C. The activity was completely inhibited by Hg 2+ ions and was reduced drastically in the presence of Cu 2+ and Fe 3+ ions. Mn 2+ ions, EDTA, β-mercaptoethanol, and dithiothreitol up to 5 m m stimulated the enzyme activity.

Diverse UV-B resistance of culturable bacterial community from high-altitude wetland water.

Isolation of most ultraviolet B (UV-B)-resistant culturable bacteria that occur in the habitat of Laguna Azul, a high-altitude wetland [4554 m above sea level (asl)] from the Northwestern Argentinean Andes, was carried out by culture-based methods. Water from this environment was exposed to UV-B radiation under laboratory conditions during 36 h, at an irradiance of 4.94 W/m2. It was found that the total number of bacteria in water samples decreased; however, most of the community survived long-term irradiation (312 nm) (53.3 kJ/m2). The percentage of bacteria belonging to dominant species did not vary significantly, depending on the number of UV irradiation doses. The most resistant microbes in the culturable community were Gram-positive pigmented species (Bacillus megaterium [endospores and/or vegetative cells], Staphylococcus saprophyticus, and Nocardia sp.). Only one Gram-negative bacterium could be cultivated (Acinetobacter johnsonii). Nocardia sp. that survived doses of 3201 kJ/m2 were the most resistant bacteria to UV-B treatment. This study is the first report on UV-B resistance of a microbial community isolated from high-altitude extreme environments, and proposes a method for direct isolation of UV-B-resistant bacteria from extreme irradiated environments.

Effects of Bacillus subtilis O9 biosurfactant on the bioremediation of crude oil-polluted soils

The application of a surfactant from Bacillus subtilis O9 (Bs) on the bioremediation of soils polluted with crude oil was assayed in soil microcosms under laboratory conditions. Three concentrations of biosurfactant were assayed (1.9, 19.5, and 39 mg kg−1 soil). Microcosms without biosurfactant were prepared as controls. During the experiment, the crude oil-degrading bacterial population, the aliphatic and aromatic hydrocarbons were monitored in each microcosm. The results indicated that applying Bs did not negatively affect the hydrocarbon-degrading microbial population Concentrations of 19 and 19.5 mg (Bs) per kilogram of soil stimulated the growth of the population involved in the crude oil degradation, and accelerated the biodegradation of the aliphatic hydrocarbons. However, none of the assayed Bs concentrations stimulated aromatic hydrocarbon degradation.

Enhancement of hydrocarbon wastebiodegradation by addition of a biosurfactantfrom Bacillus subtilis O9

A non-sterile biosurfactant preparation (surfactin)was obtained from a 24-h culture of Bacillussubtilis O9 grown on sucrose and used to study itseffect on the biodegradation of hydrocarbon wastes byan indigenous microbial community at theErlenmeyer-flask scale. Crude biosurfactant was addedto the cultures to obtain concentrations above andbelow the critical micelle concentration (CMC). Lowerconcentration affected neither biodegradation normicrobial growth. Higher concentration gave highercell concentrations. Biodegradation of aliphatichydrocarbons increased from 20.9 to 35.5% and in thecase of aromatic hydrocarbons from nil to 41%,compared to the culture without biosurfactant. Theenhancement effect of biosurfactant addition was morenoticeable in the case of long chain alkanes. Pristaneand phytane isoprenoids were degraded to the sameextent as n-C17 and n-C18 alkanes and, consequently,no decrease in the ratios n-C17/pri and n-C18/phy wasobserved. Rapid production of surfactin crudepreparation could make it practical for bioremediationof ship bilge wastes.

Isolation and characterization of biosurfactant-producing Alcanivorax strains: hydrocarbon accession strategies and alkane hydroxylase gene analysis.

Biosurfactant-producing bacteria belonging to the genera Alcanivorax, Cobetia and Halomonas were isolated from marine sediments with a history of hydrocarbon exposure (Aristizábal and Gravina Peninsulas, Argentina). Two Alcanivorax isolates were found to form naturally occurring consortia with strains closely related to Pseudomonas putida and Microbacterium esteraromaticum. Alkane hydroxylase gene analysis in these two Alcanivorax strains resulted in the identification of two novel alkB genes, showing 86% and 60% deduced amino acid sequence identity with those of Alcanivorax sp. A-11-3 and Alcanivorax dieselolei P40, respectively. In addition, a gene homologous to alkB2 from Alcanivorax borkumensis was present in one of the strains. The consortium formed by this strain, Alcanivorax sp. PA2 (98.9% 16S rRNA gene sequence identity with A. borkumensis SK2(T)) and P. putida PA1 was characterized in detail. These strains form cell aggregates when growing as mixed culture, though only PA2 was responsible for biosurfactant activity. During exponential growth phase of PA2, cells showed high hydrophobicity and adherence to hydrocarbon droplets. Biosurfactant production was only detectable at late growth and stationary phases, suggesting that it is not involved in initiating oil degradation and that direct interfacial adhesion is the main hydrocarbon accession mode of PA2. This strain could be useful for biotechnological applications due to its biosurfactant production, catabolic and aggregation properties.

Continuous production of L(+)-lactic acid by Lactobacillus casei in two-stage systems.

Abstract A two-stage two-stream chemostat system and a two-stage two-stream immobilized upflow packed-bed reactor system were used for the study of lactic acid production by Lactobacillus casei subsp casei. A mixing ratio of D12/D2 = 0.5 (D = dilution rate) resulted in optimum production, making it possible to generate continuously a broth with high lactic acid concentration (48 g l−1) and with a lowered overall content of initial yeast extract (5  g l−1), half the concentration supplied in the one-step process. In the two-stage chemostat system, with the first stage at pH 5.5 and 37 °C and a second stage at pH 6.0, a temperature change from 40 °C to 45 °C in the second stage resulted in a 100% substrate consumption at an overall dilution rate of 0.05 h−1. To increase the cell mass in the system, an adhesive strain of L. casei was used to inoculate two packed-bed reactors, which operated with two mixed feedstock streams at the optimal conditions found above. Lactic acid fermentation started after a lag period of cell growth over foam glass particles. No significant amount of free cells, compared with those adhering to the glass foam, was observed during continuous lactic acid production. The extreme values, 57.5 g l−1 for lactic acid concentration and 9.72 g l−1 h−1 for the volumetric productivity, in upflow packed-bed reactors were higher than those obtained for free cells (48 g l−1  and 2.42 g l−1 h−1) respectively and the highest overall l(+)-lactic acid purity (96.8%) was obtained in the two-chemostat system as compared with the immobilized-cell reactors (93%).

Treatment of dairy industry wastewater with an anaerobic filter

SummaryConcentrations of up to 10.2 g COD/L were applied to an horizontal anaerobic filter at 40°C, obtaining efficiencies in COD removal of 85%. The contents of the reactor are kept mixed by recycling and at a pH value of 6.9.The addition of alkali to the influent increases the production of biogas reaching a maximum of 250 L of methane per kg of COD removed.

Treatment of slaughterhouse wastewaters using anaerobic filters

In this paper, a laboratory-scale experimentation allowed comparing the performances of two upflow anaerobic packed-bed filters filled with different packing materials and operating at mesophilic conditions (30°C) for treating slaughterhouse wastewaters. Methane production was experimentally evaluated considering different volumetric organic loading rates as well as feeding overloading conditions. Although filter performances declined with loading rates higher than 6 kg CODin m−3 d−1, the chemical oxygen demand (COD) removal efficiency remained always above 60%. The experimental results allowed for determining kinetic parameters for bacterial growth rate and methane production, following Monod and Chen–Hashimoto models, respectively. Results demonstrated that the reactors reached a cellular retention time significantly greater than the hydraulic retention time. The kinetic parameter values (Ks, μmax) revealed the low microorganisms’ affinity for the substrate and confirmed the moderate biodegradability of slaughterhouse wastewater. The kinetic analysis also allowed the comparison of the filters performances with another anaerobic system and the assessment of the parameters useful for real-scale plant design. The system design, applied to a medium-sized Argentinean slaughterhouse, demonstrated to (i) be energetically self-sufficient and (ii) contribute to the plants water heating requirements.