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Dive into the research topics where Gordon Berman is active.

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Featured researches published by Gordon Berman.


Journal of Fluid Mechanics | 2007

Energy-minimizing kinematics in hovering insect flight

Gordon Berman; Z. Jane Wang

We investigate aspects of hovering insect flight by finding the optimal wing kinematics which minimize power consumption while still providing enough lift to maintain a time-averaged constant altitude over one flapping period. In particular, we study the flight of three insects whose masses vary by approximately three orders of magnitude: fruitfly ( Drosophila melanogaster ), bumblebee ( Bombus terrestris ), and hawkmoth ( Manduca sexta ). Here, we model an insect wing as a rigid body with three rotational degrees of freedom. The aerodynamic forces are modelled via a quasi-steady model of a thin plate interacting with the surrounding fluid. The advantage of this model, as opposed to the more computationally costly method of direct numerical simulation via computational fluid dynamics, is that it allows us to perform optimization procedures and detailed sensitivity analyses which require many cost function evaluations. The optimal solutions are found via a hybrid optimization algorithm combining aspects of a genetic algorithm and a gradient-based optimizer. We find that the results of this optimization yield kinematics which are qualitatively and quantitatively similar to previously observed data. We also perform sensitivity analyses on parameters of the optimal kinematics to gain insight into the values of the observed optima. Additionally, we find that all of the optimal kinematics found here maintain the same leading edge throughout the stroke, as is the case for nearly all insect wing motions. We show that this type of stroke takes advantage of a passive wing rotation in which aerodynamic forces help to reverse the wing pitch, similar to the turning of a free-falling leaf.


Proceedings of the National Academy of Sciences of the United States of America | 2010

Discovering the flight autostabilizer of fruit flies by inducing aerial stumbles

Leif Ristroph; Attila Bergou; Gunnar Ristroph; Katherine Coumes; Gordon Berman; John Guckenheimer; Z. Jane Wang; Itai Cohen

Just as the Wright brothers implemented controls to achieve stable airplane flight, flying insects have evolved behavioral strategies that ensure recovery from flight disturbances. Pioneering studies performed on tethered and dissected insects demonstrate that the sensory, neurological, and musculoskeletal systems play important roles in flight control. Such studies, however, cannot produce an integrative model of insect flight stability because they do not incorporate the interaction of these systems with free-flight aerodynamics. We directly investigate control and stability through the application of torque impulses to freely flying fruit flies (Drosophila melanogaster) and measurement of their behavioral response. High-speed video and a new motion tracking method capture the aerial “stumble,” and we discover that flies respond to gentle disturbances by accurately returning to their original orientation. These insects take advantage of a stabilizing aerodynamic influence and active torque generation to recover their heading to within 2° in < 60 ms. To explain this recovery behavior, we form a feedback control model that includes the fly’s ability to sense body rotations, process this information, and actuate the wing motions that generate corrective aerodynamic torque. Thus, like early man-made aircraft and modern fighter jets, the fruit fly employs an automatic stabilization scheme that reacts to short time-scale disturbances.


Journal of the Royal Society Interface | 2014

Mapping the stereotyped behaviour of freely moving fruit flies

Gordon Berman; Daniel M. Choi; William Bialek; Joshua W. Shaevitz

A frequent assumption in behavioural science is that most of an animals activities can be described in terms of a small set of stereotyped motifs. Here, we introduce a method for mapping an animals actions, relying only upon the underlying structure of postural movement data to organize and classify behaviours. Applying this method to the ground-based behaviour of the fruit fly, Drosophila melanogaster, we find that flies perform stereotyped actions roughly 50% of the time, discovering over 100 distinguishable, stereotyped behavioural states. These include multiple modes of locomotion and grooming. We use the resulting measurements as the basis for identifying subtle sex-specific behavioural differences and revealing the low-dimensional nature of animal motions.


The Journal of Experimental Biology | 2009

Automated hull reconstruction motion tracking (HRMT) applied to sideways maneuvers of free-flying insects

Leif Ristroph; Gordon Berman; Attila Bergou; Z. J. Wang; Itai Cohen

SUMMARY Flying insects perform aerial maneuvers through slight manipulations of their wing motions. Because such manipulations in wing kinematics are subtle, a reliable method is needed to properly discern consistent kinematic strategies used by the insect from inconsistent variations and measurement error. Here, we introduce a novel automated method that accurately extracts full, 3D body and wing kinematics from high-resolution films of free-flying insects. This method combines visual hull reconstruction, principal components analysis, and geometric information about the insect to recover time series data of positions and orientations. The technique has small, well-characterized errors of under 3 pixels for positions and 5 deg. for orientations. To show its utility, we apply this motion tracking to the flight of fruit flies, Drosophila melanogaster. We find that fruit flies generate sideways forces during some maneuvers and that strong lateral acceleration is associated with differences between the left and right wing angles of attack. Remarkably, this asymmetry can be induced by simply altering the relative timing of flips between the right and left wings, and we observe that fruit flies employ timing differences as high as 10% of a wing beat period while accelerating sideways at 40% g.


Proceedings of the National Academy of Sciences of the United States of America | 2016

Predictability and hierarchy in Drosophila behavior.

Gordon Berman; William Bialek; Joshua W. Shaevitz

Significance How an animal chooses to order its activities—moving, grooming, resting, and so on—is essential to its ability to survive, adapt, and reproduce. Here we investigate the temporal pattern of behaviors performed by fruit flies, finding that their movements are organized in a hierarchical manner that exhibits long time scales. This organization is likely advantageous for adaptability and ease of neural representation and provides hints as to the form of the fly’s internal representations of behavioral programs. Even the simplest of animals exhibit behavioral sequences with complex temporal dynamics. Prominent among the proposed organizing principles for these dynamics has been the idea of a hierarchy, wherein the movements an animal makes can be understood as a set of nested subclusters. Although this type of organization holds potential advantages in terms of motion control and neural circuitry, measurements demonstrating this for an animal’s entire behavioral repertoire have been limited in scope and temporal complexity. Here, we use a recently developed unsupervised technique to discover and track the occurrence of all stereotyped behaviors performed by fruit flies moving in a shallow arena. Calculating the optimally predictive representation of the fly’s future behaviors, we show that fly behavior exhibits multiple time scales and is organized into a hierarchical structure that is indicative of its underlying behavioral programs and its changing internal states.


Archive | 2012

Dynamics, Control, and Stabilization of Turning Flight in Fruit Flies

Leif Ristroph; Attila Bergou; Gordon Berman; John Guckenheimer; Z. Jane Wang; Itai Cohen

Complex behaviors of flying insects require interactions among sensory-neural systems, wing actuation biomechanics, and flapping-wing aerodynamics. Here, we review our recent progress in understanding these layers for maneuvering and stabilization flight of fruit flies. Our approach combines kinematic data from flying insects and aerodynamic simulations to distill reduced-order mathematical models of flight dynamics, wing actuation mechanisms, and control and stabilization strategies. Our central findings include: (1) During in-flight turns, fruit flies generate torque by subtly modulating wing angle of attack, in effect paddling to push off the air; (2) These motions are generated by biasing the orientation of a biomechanical brake that tends to resist rotation of the wing; (3) A simple and fast sensory-neural feedback scheme determines this wing actuation and thus the paddling motions needed for stabilization of flight heading against external disturbances. These studies illustrate a powerful approach for studying the integration of sensory-neural feedback, actuation, and aerodynamic strategies used by flying insects.


eLife | 2017

Cilia-mediated Hedgehog signaling controls form and function in the mammalian larynx

Jacqueline M. Tabler; Maggie M. Rigney; Gordon Berman; Swetha Gopalakrishnan; Eglantine Heude; Hadeel Adel Al-Lami; Basil Z Yannakoudiadkis; Rebecca Fitch; Christopher Carter; Steven A. Vokes; Karen J. Liu; Shahragim Tajbakhsh; Se Roian Egnor; John B. Wallingford

Acoustic communication is fundamental to social interactions among animals, including humans. In fact, deficits in voice impair the quality of life for a large and diverse population of patients. Understanding the molecular genetic mechanisms of development and function in the vocal apparatus is thus an important challenge with relevance both to the basic biology of animal communication and to biomedicine. However, surprisingly little is known about the developmental biology of the mammalian larynx. Here, we used genetic fate mapping to chart the embryological origins of the tissues in the mouse larynx, and we describe the developmental etiology of laryngeal defects in mice with disruptions in cilia-mediated Hedgehog signaling. In addition, we show that mild laryngeal defects correlate with changes in the acoustic structure of vocalizations. Together, these data provide key new insights into the molecular genetics of form and function in the mammalian vocal apparatus. DOI: http://dx.doi.org/10.7554/eLife.19153.001


Physical Biology | 2017

An unsupervised method for quantifying the behavior of paired animals

Ugne Klibaite; Gordon Berman; Jessica Cande; David L. Stern; Joshua W. Shaevitz

Behaviors involving the interaction of multiple individuals are complex and frequently crucial for an animals survival. These interactions, ranging across sensory modalities, length scales, and time scales, are often subtle and difficult to characterize. Contextual effects on the frequency of behaviors become even more difficult to quantify when physical interaction between animals interferes with conventional data analysis, e.g. due to visual occlusion. We introduce a method for quantifying behavior in fruit fly interaction that combines high-throughput video acquisition and tracking of individuals with recent unsupervised methods for capturing an animals entire behavioral repertoire. We find behavioral differences between solitary flies and those paired with an individual of the opposite sex, identifying specific behaviors that are affected by social and spatial context. Our pipeline allows for a comprehensive description of the interaction between two individuals using unsupervised machine learning methods, and will be used to answer questions about the depth of complexity and variance in fruit fly courtship.


eLife | 2015

Acoustic duetting in Drosophila virilis relies on the integration of auditory and tactile signals

Kelly M. LaRue; Jan Clemens; Gordon Berman; Mala Murthy

Many animal species, including insects, are capable of acoustic duetting, a complex social behavior in which males and females tightly control the rate and timing of their courtship song syllables relative to each other. The mechanisms underlying duetting remain largely unknown across model systems. Most studies of duetting focus exclusively on acoustic interactions, but the use of multisensory cues should aid in coordinating behavior between individuals. To test this hypothesis, we develop Drosophila virilis as a new model for studies of duetting. By combining sensory manipulations, quantitative behavioral assays, and statistical modeling, we show that virilis females combine precisely timed auditory and tactile cues to drive song production and duetting. Tactile cues delivered to the abdomen and genitalia play the larger role in females, as even headless females continue to coordinate song production with courting males. These data, therefore, reveal a novel, non-acoustic, mechanism for acoustic duetting. Finally, our results indicate that female-duetting circuits are not sexually differentiated, as males can also produce ‘female-like’ duets in a context-dependent manner. DOI: http://dx.doi.org/10.7554/eLife.07277.001


eLife | 2018

Optogenetic dissection of descending behavioral control in Drosophila

Jessica Cande; Shigehiro Namiki; Jirui Qiu; Wyatt Korff; Gwyneth M. Card; Joshua W. Shaevitz; David L. Stern; Gordon Berman

In most animals, the brain makes behavioral decisions that are transmitted by descending neurons to the nerve cord circuitry that produces behaviors. In insects, only a few descending neurons have been associated with specific behaviors. To explore how descending neurons control an insect’s movements, we developed a novel method to systematically assay the behavioral effects of activating individual neurons on freely behaving terrestrial D. melanogaster. We calculated a two-dimensional representation of the entire behavior space explored by these flies, and we associated descending neurons with specific behaviors by identifying regions of this space that were visited with increased frequency during optogenetic activation. Applying this approach across a large collection of descending neurons, we found that (1) activation of most of the descending neurons drove stereotyped behaviors, (2) in many cases multiple descending neurons activated similar behaviors, and (3) optogenetically activated behaviors were often dependent on the behavioral state prior to activation.

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David L. Stern

Howard Hughes Medical Institute

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Jessica Cande

Howard Hughes Medical Institute

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Alessio Medda

Georgia Tech Research Institute

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