Hans-Peter Klenk
Lawrence Livermore National Laboratory
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Standards in Genomic Sciences | 2010
Natalia Ivanova; Johannes Sikorski; Marlen Jando; Christine Munk; Alla Lapidus; Tijana Glavina del Rio; Alex Copeland; Hope Tice; Jan Fang Cheng; Susan Lucas; Feng Chen; Matt Nolan; David Bruce; Lynne Goodwin; Sam Pitluck; Konstantinos Mavromatis; Natalia Mikhailova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun Juan Chang; Cynthia D. Jeffries; Linda Meincke; Thomas Brettin; John C. Detter; Manfred Rohde; Markus Göker; Jim Bristow
Geodermatophilus obscurus Luedemann 1968 is the type species of the genus, which is the type genus of the family Geodermatophilaceae. G. obscurus is of interest as it has frequently been isolated from stressful environments such as rock varnish in deserts, and as it exhibits interesting phenotypes such as lytic capability of yeast cell walls, UV-C resistance, strong production of extracellular functional amyloid (FuBA) and manganese oxidation. This is the first completed genome sequence of the family Geodermatophilaceae. The 5,322,497 bp long genome with its 5,161 protein-coding and 58 RNA genes is part of the GenomicEncyclopedia ofBacteria andArchaea project.
Standards in Genomic Sciences | 2010
Tijana Glavina del Rio; Birte Abt; Stefan Spring; Alla Lapidus; Matt Nolan; Hope Tice; Alex Copeland; Jan Fang Cheng; Feng Chen; David Bruce; Lynne Goodwin; Sam Pitluck; Natalia Ivanova; Konstantinos Mavromatis; Natalia Mikhailova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun Juan Chang; Cynthia D. Jeffries; Patrick Chain; Elizabeth Saunders; John C. Detter; Thomas Brettin; Manfred Rohde; Markus Göker; Jim Bristow; Jonathan A. Eisen
Chitinophaga pinensis Sangkhobol and Skerman 1981 is the type strain of the species which is the type species of the rapidly growing genus Chitinophaga in the sphingobacterial family ‘Chitinophagaceae’. Members of the genus Chitinophaga vary in shape between filaments and spherical bodies without the production of a fruiting body, produce myxospores, and are of special interest for their ability to degrade chitin. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the family ‘Chitinophagaceae’, and the 9,127,347 bp long single replicon genome with its 7,397 protein-coding and 95 RNA genes is part of the GenomicEncyclopedia ofBacteria andArchaea project.
Archive | 2016
Arantxa Peña; Antonio Busquets; Margarita Gomila; Magdalena Mulet; Rosa Gomila; T. B. K. Reddy; Marcel Huntemann; Amrita Pati; Natalia Ivanova; Victor Markowitz; Elena García-Valdés; Markus Göker; Tanja Woyke; Hans-Peter Klenk; Nikos Kyrpides; Jorge Lalucat
Major protein profiles of P. fulva DSM 17717T, P. parafulva DSM 17004T and P. cremoricolorata DSM 17059T type strains. The intensity value was determined as an average from all spectra containing that peak and the relative intensities with respect to the base peak in percentage are indicated within parenthesis. (m/z: mass to charge ratio; + and -: presence or absence of the corresponding protein). (PDF 99 kb)
Archive | 2016
Yana Aizenberg-Gershtein; Ido Izhaki; Alla Lapidus; Alex Copeland; T. B. K. Reddy; Marcel Huntemann; Manoj Pillay; Victor Markowitz; Markus GĂśker; Tanja Woyke; Hans-Peter Klenk; Nikos Kyrpides; Malka Halpern
Archive | 2016
Irina Panschin; Sixing Huang; Jan P. Meier-Kolthoff; Brian J. Tindall; Rohde M; Susanne Verbarg; Alla Lapidus; James Han; Stephan Trong; Matthew Haynes; T. B. K. Reddy; Marcel Huntemann; Amrita Pati; Natalia Ivanova; Konstantinos Mavromatis; Victor Markowitz; Tanja Woyke; Markus Göker; Hans-Peter Klenk; Nikos Kyrpides; Richard L. Hahnke
Archive | 2015
A. F. Yassin; Alla Lapidus; James Han; Marcel Huntemann; Amrita Pati; Natalia Ivanova; Victor Markowitz; Tanja Woyke; Hans-Peter Klenk; Nikos Kyrpides
Archive | 2015
Robert Riley; Sajeet Haridas; Asaf Salamov; Kyria Boundy-Mills; Markus Göker; Chris Todd Hittinger; Hans-Peter Klenk; Mariana R. Lopes; Jan P. Meir-Kolthoff; Antonis Rokas; Carlos A. Rosa; Carmen Scheuner; Marco Aurélio Soares; Benjamin Stielow; Jennifer H. Wisecaver; Kenneth H. Wolfe; Meredith Blackwell; Cletus P. Kurtzman; Igor Grigoriev; Thomas W. Jeffries
Archive | 2013
Konstantinos Mavromatis; Erko Stackebrandt; Christine Munk; Alla Lapidus; Susan Lucas; Nancy Hammon; Shweta Deshpande; Jan-Fang Cheng; Lynne Goodwin; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Mikhailova; Marcel Huntemann; Amrita Pati; Amy Chen; Miriam Land; Loren Hauser; Rohde M; Sabine Gronow; John C. Detter; James Bristow; Jonathan A. Eisen; Victor Markowitz; Nikos Kyrpides; Hans-Peter Klenk; Tanja Woyke
Archive | 2013
Iain Anderson; Huzuki Teshima; Matt Nolan; Alla Lapidus; Hope Tice; Jan-Fang Cheng; Cliff Han; Roxanne Tapia; Lynne Goodwin; Sam Pitluck; Konstantinos Liolios; Konstantinos Mavromatis; Ioanna Pagani; Natalia Mikhailova; Amrita Pati; Amy Chen; Krishna Palaniappan; Rohde M; Elke Lang; John C. Detter; Markus Göker; Tanja Woyke; Jonathan A. Eisen; Victor Markowitz; Philip Hugenholtz; Hans-Peter Klenk
Archive | 2013
Alexander Loy; Tanja Woyke; Bernard Ollivier; Hans-Peter Klenk; Natalia Mikhailova; Amrita Pati; Michael Wagner; Konstantinos Mavromatis; Victor Markowitz; Hajnalka Daligault; Chia-Lin Wei; Nikos Kyrpides; Natalia Ivanova; Cliff Han; Miriam Land; Galina Ovchinnikova; Hazuki Teshima; Jan-Fang Cheng; Lynne Goodwin; Sam Pitluck; James Han; Susan Lucas; Alla Michael Pester; Evelyne Brambilla; Didier Alazard