Alla Lapidus
University of California, Davis
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Standards in Genomic Sciences | 2011
Tanja Woyke; Olga Chertkov; Alla Lapidus; Matt Nolan; Susan Lucas; Tijana Glavina del Rio; Hope Tice; Jan Fang Cheng; Roxanne Tapia; Cliff Han; Lynne Goodwin; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Ivanova; Marcel Huntemann; Konstantinos Mavromatis; Natalia Mikhailova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Evelyne Brambilla; Rohde M; Romano Mwirichia; Johannes Sikorski; Brian J. Tindall; Markus Göker; James Bristow
Fluviicola taffensis O’Sullivan et al. 2005 belongs to the monotypic genus Fluviicola within the family Cryomorphaceae. The species is of interest because of its isolated phylogenetic location in the genome-sequenced fraction of the tree of life. Strain RW262T forms a monophyletic lineage with uncultivated bacteria represented in freshwater 16S rRNA gene libraries. A similar phylogenetic differentiation occurs between freshwater and marine bacteria in the family Flavobacteriaceae, a sister family to Cryomorphaceae. Most remarkable is the inability of this freshwater bacterium to grow in the presence of Na+ ions. All other genera in the family Cryomorphaceae are from marine habitats and have an absolute requirement for Na+ ions or natural sea water. F. taffensis is the first member of the family Cryomorphaceae with a completely sequenced and publicly available genome. The 4,633,577 bp long genome with its 4,082 protein-coding and 49 RNA genes is a part of the GenomicEncyclopedia ofBacteria andArchaea project.
Archive | 2009
Stephan Trong; Kurt LaButti; Brian Foster; Cliff Han; Tom Brettin; Alla Lapidus
Archive | 2009
Brian Foster; Kurt LaButti; Stephan Trong; Cliff Han; Tom Brettin; Alla Lapidus
Archive | 2008
Kurt LaButti; Brian Foster; Steve Lowry; Stephan Trong; Eugene Goltsman; Alla Lapidus
Archive | 2005
J.D. Coates; K.V. Kellaris; William S. Feil; Helene Feil; L.A. Achenbach; R. Chakraborty; C. Shang; E. Alm; K. Huang; M. Price; Keith Keller; Stephan Trong; G. Di Bartolo; A. Arkin; Alla Lapidus; Paul M. Richardson; Frank W. Larimer; S.M. O'Connor
Archive | 2016
Robert P. Gunsalus; Lauren E. Cook; Bryan R. Crable; Lars Rohlin; Erin McDonald; Housna Mouttaki; Jessica R. Sieber; Nicole Poweleit; Hong Zhou; Alla Lapidus; Hajnalka Daligault; Miriam Land; Paul Gilna; Natalia Ivanova; Nikos Kyrpides; David E. Culley; Michael J. McInerney
Archive | 2016
Yana Aizenberg-Gershtein; Ido Izhaki; Alla Lapidus; Alex Copeland; T. B. K. Reddy; Marcel Huntemann; Manoj Pillay; Victor Markowitz; Markus GĂśker; Tanja Woyke; Hans-Peter Klenk; Nikos Kyrpides; Malka Halpern
Archive | 2016
Irina Panschin; Sixing Huang; Jan P. Meier-Kolthoff; Brian J. Tindall; Rohde M; Susanne Verbarg; Alla Lapidus; James Han; Stephan Trong; Matthew Haynes; T. B. K. Reddy; Marcel Huntemann; Amrita Pati; Natalia Ivanova; Konstantinos Mavromatis; Victor Markowitz; Tanja Woyke; Markus Göker; Hans-Peter Klenk; Nikos Kyrpides; Richard L. Hahnke
Archive | 2015
A. F. Yassin; Alla Lapidus; James Han; Marcel Huntemann; Amrita Pati; Natalia Ivanova; Victor Markowitz; Tanja Woyke; Hans-Peter Klenk; Nikos Kyrpides
Archive | 2013
Konstantinos Mavromatis; Erko Stackebrandt; Christine Munk; Alla Lapidus; Susan Lucas; Nancy Hammon; Shweta Deshpande; Jan-Fang Cheng; Lynne Goodwin; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Mikhailova; Marcel Huntemann; Amrita Pati; Amy Chen; Miriam Land; Loren Hauser; Rohde M; Sabine Gronow; John C. Detter; James Bristow; Jonathan A. Eisen; Victor Markowitz; Nikos Kyrpides; Hans-Peter Klenk; Tanja Woyke
