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Dive into the research topics where Hirohito Shimizu is active.

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Featured researches published by Hirohito Shimizu.


Genes & Development | 2014

Regulation of Sufu activity by p66β and Mycbp provides new insight into vertebrate Hedgehog signaling

Chuwen Lin; Erica Yao; Kevin Wang; Yoko Inès Nozawa; Hirohito Shimizu; Jeffrey R. Johnson; Jau-Nian Chen; Nevan J. Krogan; Pao-Tien Chuang

Control of Gli function by Suppressor of Fused (Sufu), a major negative regulator, is a key step in mammalian Hedgehog (Hh) signaling, but how this is achieved in the nucleus is unknown. We found that Hh signaling results in reduced Sufu protein levels and Sufu dissociation from Gli proteins in the nucleus, highlighting critical functions of Sufu in the nucleus. Through a proteomic approach, we identified several Sufu-interacting proteins, including p66β (a member of the NuRD [nucleosome remodeling and histone deacetylase] repressor complex) and Mycbp (a Myc-binding protein). p66β negatively and Mycbp positively regulate Hh signaling in cell-based assays and zebrafish. They function downstream from the membrane receptors, Patched and Smoothened, and the primary cilium. Sufu, p66β, Mycbp, and Gli are also detected on the promoters of Hh targets in a dynamic manner. Our results support a new model of Hh signaling in the nucleus. Sufu recruits p66β to block Gli-mediated Hh target gene expression. Meanwhile, Mycbp forms a complex with Gli and Sufu without Hh stimulation but remains inactive. Hh pathway activation leads to dissociation of Sufu/p66β from Gli, enabling Mycbp to promote Gli protein activity and Hh target gene expression. These studies provide novel insight into how Sufu controls Hh signaling in the nucleus.


Arteriosclerosis, Thrombosis, and Vascular Biology | 2014

Shear Stress–Activated Wnt-Angiopoietin-2 Signaling Recapitulates Vascular Repair in Zebrafish Embryos

Rongsong Li; Tyler Beebe; Nelson Jen; Fei Yu; Wakako Takabe; Michael R. Harrison; Hung Cao; Juhyun Lee; Hongbo Yang; Peidong Han; Kevin Wang; Hirohito Shimizu; Jau-Nian Chen; Ching-Ling Lien; Neil C. Chi; Tzung K. Hsiai

Objective— Fluid shear stress intimately regulates vasculogenesis and endothelial homeostasis. The canonical Wnt/&bgr;-catenin signaling pathways play an important role in differentiation and proliferation. In this study, we investigated whether shear stress activated angiopoietin-2 (Ang-2) via the canonical Wnt signaling pathway with an implication in vascular endothelial repair. Approach and Results— Oscillatory shear stress upregulated both TOPflash Wnt reporter activities and the expression of Ang-2 mRNA and protein in human aortic endothelial cells accompanied by an increase in nuclear &bgr;-catenin intensity. Oscillatory shear stress–induced Ang-2 and Axin-2 mRNA expression was downregulated in the presence of a Wnt inhibitor, IWR-1, but was upregulated in the presence of a Wnt agonist, LiCl. Ang-2 expression was further downregulated in response to a Wnt signaling inhibitor, DKK-1, but was upregulated by Wnt agonist Wnt3a. Both DKK-1 and Ang-2 siRNA inhibited endothelial cell migration and tube formation, which were rescued by human recombinant Ang-2. Both Ang-2 and Axin-2 mRNA downregulation was recapitulated in the heat-shock–inducible transgenic Tg(hsp70l:dkk1-GFP) zebrafish embryos at 72 hours post fertilization. Ang-2 morpholino injection of Tg (kdrl:GFP) fish impaired subintestinal vessel formation at 72 hours post fertilization, which was rescued by zebrafish Ang-2 mRNA coinjection. Inhibition of Wnt signaling with IWR-1 also downregulated Ang-2 and Axin-2 expression and impaired vascular repair after tail amputation, which was rescued by zebrafish Ang-2 mRNA injection. Conclusions— Shear stress activated Ang-2 via canonical Wnt signaling in vascular endothelial cells, and Wnt-Ang-2 signaling is recapitulated in zebrafish embryos with a translational implication in vascular development and repair.


eLife | 2015

Mitochondrial Ca2+ uptake by the voltage-dependent anion channel 2 regulates cardiac rhythmicity

Hirohito Shimizu; Johann Schredelseker; Jie Huang; Kui Lu; Shamim Naghdi; Fei Lu; Sarah Franklin; Hannah D. G. Fiji; Kevin Wang; Huanqi Zhu; Cheng Tian; Billy Lin; Haruko Nakano; Amy M Ehrlich; Junichi Nakai; Adam Z. Stieg; James K. Gimzewski; Atsushi Nakano; Joshua I. Goldhaber; Thomas M. Vondriska; György Hajnóczky; Ohyun Kwon; Jau-Nian Chen

Tightly regulated Ca2+ homeostasis is a prerequisite for proper cardiac function. To dissect the regulatory network of cardiac Ca2+ handling, we performed a chemical suppressor screen on zebrafish tremblor embryos, which suffer from Ca2+ extrusion defects. Efsevin was identified based on its potent activity to restore coordinated contractions in tremblor. We show that efsevin binds to VDAC2, potentiates mitochondrial Ca2+ uptake and accelerates the transfer of Ca2+ from intracellular stores into mitochondria. In cardiomyocytes, efsevin restricts the temporal and spatial boundaries of Ca2+ sparks and thereby inhibits Ca2+ overload-induced erratic Ca2+ waves and irregular contractions. We further show that overexpression of VDAC2 recapitulates the suppressive effect of efsevin on tremblor embryos whereas VDAC2 deficiency attenuates efsevins rescue effect and that VDAC2 functions synergistically with MCU to suppress cardiac fibrillation in tremblor. Together, these findings demonstrate a critical modulatory role for VDAC2-dependent mitochondrial Ca2+ uptake in the regulation of cardiac rhythmicity. DOI: http://dx.doi.org/10.7554/eLife.04801.001


Journal of Biological Chemistry | 2014

NADPH Oxidase 4 Induces Cardiac Arrhythmic Phenotype in Zebrafish

Yixuan Zhang; Hirohito Shimizu; Kin Lung Siu; Aman Mahajan; Jau-Nian Chen; Hua Cai

Background: Oxidative stress has been implicated in arrhythmia without a defined causal relationship. Results: Overexpression of NOX4 in zebrafish embryos induces arrhythmic phenotype via ROS and CaMKII. Conclusion: NADPH-driven ROS production and subsequent CaMKII activation mediate NOX4-dependent arrhythmogenesis. Significance: Our data present the first evidence for a direct causal role of NOX4 in cardiac arrhythmia. Oxidative stress has been implicated in cardiac arrhythmia, although a causal relationship remains undefined. We have recently demonstrated a marked up-regulation of NADPH oxidase isoform 4 (NOX4) in patients with atrial fibrillation, which is accompanied by overproduction of reactive oxygen species (ROS). In this study, we investigated the impact on the cardiac phenotype of NOX4 overexpression in zebrafish. One-cell stage embryos were injected with NOX4 RNA prior to video recording of a GFP-labeled (myl7:GFP zebrafish line) beating heart in real time at 24–31 h post-fertilization. Intriguingly, NOX4 embryos developed cardiac arrhythmia that is characterized by irregular heartbeats. When quantitatively analyzed by an established LQ-1 program, the NOX4 embryos displayed much more variable beat-to-beat intervals (mean S.D. of beat-to-beat intervals was 0.027 s/beat in control embryos versus 0.038 s/beat in NOX4 embryos). Both the phenotype and the increased ROS in NOX4 embryos were attenuated by NOX4 morpholino co-injection, treatments of the embryos with polyethylene glycol-conjugated superoxide dismutase, or NOX4 inhibitors fulvene-5, 6-dimethylamino-fulvene, and proton sponge blue. Injection of NOX4-P437H mutant RNA had no effect on the cardiac phenotype or ROS production. In addition, phosphorylation of calcium/calmodulin-dependent protein kinase II was increased in NOX4 embryos but diminished by polyethylene glycol-conjugated superoxide dismutase, whereas its inhibitor KN93 or AIP abolished the arrhythmic phenotype. Taken together, our data for the first time uncover a novel pathway that underlies the development of cardiac arrhythmia, namely NOX4 activation, subsequent NOX4-specific NADPH-driven ROS production, and redox-sensitive CaMKII activation. These findings may ultimately lead to novel therapeutics targeting cardiac arrhythmia.


Birth Defects Research Part A-clinical and Molecular Teratology | 2010

Genetic and pathologic aspects of retinoic acid-induced limb malformations in the mouse†

Grace S. Lee; Xiaoyan Liao; Hirohito Shimizu; Michael D. Collins

Because all-trans retinoic acid (atRA) is teratogenic in all species tested and many of the specific defects induced are common across the phylogenetic spectrum, it would be logical to predict that murine strain differences in teratology to this agent are minimal. However, for specific defects, strain susceptibilities are vastly different. Studies with atRA have shown stark differences between C57BL/6 and SWV mouse strains in susceptibility to postaxial forelimb ectrodactyly and ectopic hindlimb formation, with the C57 strain being more susceptible for both defects. Various approaches were used to determine why these strains differ in susceptibility, but the mechanisms remain unknown. Hindlimb duplications were hypothesized to be caused by the formation of ectopic posterior body axes. For forelimb ectrodactyly, a locus on chromosome 11, Rafar, has linkage to the strain difference, and mRNA localization has shown that specific genes (Fgf8, Dlx3, Bmp4, and Sp8) in the postaxial preAER (prior to formation of the apical ectodermal ridge) of the developing limb bud (the site of the defect) were downregulated hours after atRA administration more in the susceptible C57 than in the SWV strain. Because both atRA and divalent cadmium induce postaxial forelimb ectrodactyly (right-sided predominance) at a high rate in C57BL/6 and low in the SWV strain, there is debate as to whether they share a common mechanism. These teratogens cause a greater-than-additive level of forelimb ectrodactyly when coadministered at low doses, but cadmium does not induce ectopic hindlimb formation. The hypothesis is that these agents have separate molecular pathologic pathways that converge to perturb a common anatomic structure.


eLife | 2017

The Calcineurin-FoxO-MuRF1 signaling pathway regulates myofibril integrity in cardiomyocytes

Hirohito Shimizu; Adam Langenbacher; Jie Huang; Kevin Wang; Georg Otto; Robert Geisler; Yibin Wang; Jau-Nian Chen

Altered Ca2+ handling is often present in diseased hearts undergoing structural remodeling and functional deterioration. However, whether Ca2+ directly regulates sarcomere structure has remained elusive. Using a zebrafish ncx1 mutant, we explored the impacts of impaired Ca2+ homeostasis on myofibril integrity. We found that the E3 ubiquitin ligase murf1 is upregulated in ncx1-deficient hearts. Intriguingly, knocking down murf1 activity or inhibiting proteasome activity preserved myofibril integrity, revealing a MuRF1-mediated proteasome degradation mechanism that is activated in response to abnormal Ca2+ homeostasis. Furthermore, we detected an accumulation of the murf1 regulator FoxO in the nuclei of ncx1-deficient cardiomyocytes. Overexpression of FoxO in wild type cardiomyocytes induced murf1 expression and caused myofibril disarray, whereas inhibiting Calcineurin activity attenuated FoxO-mediated murf1 expression and protected sarcomeres from degradation in ncx1-deficient hearts. Together, our findings reveal a novel mechanism by which Ca2+ overload disrupts myofibril integrity by activating a Calcineurin-FoxO-MuRF1-proteosome signaling pathway.


Toxicology and Applied Pharmacology | 2007

Comparative molecular pathology of cadmium- and all-trans-retinoic acid-induced postaxial forelimb ectrodactyly☆

Xiaoyan Liao; Grace S. Lee; Hirohito Shimizu; Michael D. Collins


Birth Defects Research Part A-clinical and Molecular Teratology | 2007

Altered localization of gene expression in both ectoderm and mesoderm is associated with a murine strain difference in retinoic acid–induced forelimb ectrodactyly

Hirohito Shimizu; Grace S. Lee; Sudheer R. Beedanagari; Michael D. Collins


Circulation Research | 2012

Abstract 189: Activation of Voltage-Dependent Anion Channel 2 Suppresses Ca2+-Induced Cardiac Arrhythmia

Jau-Nian Chen; Johann Schredelseker; Hirohito Shimizu; Jie Huang; Kui Lu; Sarah Franklin; Thomas M. Vondriska; Joshua I. Goldhaber; Ohyun Kwon


Circulation | 2012

Abstract 17814: Nadph Oxidase 4 Induces Cardiac Arrhythmia in Zebrafish

Yixuan Zhang; Hirohito Shimizu; Kin Lung Siu; Jau-Nian Chen; Hua Cai

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Jau-Nian Chen

University of California

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Grace S. Lee

University of California

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Jie Huang

University of California

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Kevin Wang

University of California

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Xiaoyan Liao

University of California

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Billy Lin

University of California

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Hua Cai

University of California

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