Howard F. Schwartz

Iris yellow spot virus: An Emerging Threat to Onion Bulb and Seed Production

This paper reviews the history of Iris yellow spot virus in the USA and the world, epidemiology of Iris yellow spot and the onion thrips vector, and management of Iris yellow spot and thrips. Future prospects and outlook are also discussed.

New sources of resistance to anthracnose and angular leaf spot of beans (Phaseolus vulgaris L.).

Summaryover 13000 CIAT bean accessions were evaluated for their reactions to the anthracnose (Colletotrichum lindemuthianum) and angular leaf spot (Isariopsis griseola) pathogens over a 3 yr period. Among these accessions, 156 were resistant to all races of the anthracnose pathogen collected from Popayán, Colombia. Thirty were resistant to numerous races obtained from other parts of the world, including Europe. Although many of these new resistant sources originated in Mexico and Central America, they are quite diverse for geographic origin, plant type, seed color and seed size. In addition, more than 50 of the 156 lines were also resistant to isolates of I. griseola with diverse sources of origin throughout Colombia.

Distribution and incidence of Iris yellow spot virus in Colorado and its relation to onion plant population and yield

Iris yellow spot virus (IYSV) is an emerging and potentially devastating disease of onion that was recently detected in Colorado and other onion producing regions in the western United States. In annual surveys, IYSV was confirmed in one of 18 fields (5.6%) in 2001, four of 24 (16.7%) in 2002, and 41 of 56 (73.2%) in 2003. IYSV was confirmed on volunteer onions in 2003 at all four locations where IYSV was observed in the onion crop the previous year. The disease was detected in six of seven western Colorado onion fields surveyed in 2003, but was not observed any year in southern or northeastern Colorado. The spatial variability of disease incidence, yield, and plant population also was mapped in two fields in 2003 using the global positioning system and a geographic information system. Disease incidence varied among cultivars, plant population, fields, and location in the field. Distinct disease gradients were observed in both fields with susceptible cultivars Teton and Granero, but not in the moderately resistant cultivar Sterling. In fields planted to the susceptible cultivars, disease incidence was highest on the field edges and lowest near the field centers. Plant population was negatively correlated with IYSV incidence in cultivar Sterling (R2 = 0.56, P = 0.003), but not with the susceptible cultivars. Yield of jumbo market class onions, but not total yield, was negatively correlated with increasing IYSV incidence (R2 = 0.37, P = 0.012) in cultivar Teton. Colossal market class yield, but not other yield components, was negatively correlated with IYSV incidence in cultivar Sterling (R2 = 0.28, P = 0.061). The results of these studies indicate the distribution of IYSV is rapidly expanding in Colorado and is associated with a general reduction in bulb size.

Management of Xanthomonas Leaf Blight of Onion with a Plant Activator, Biological Control Agents, and Copper Bactericides

Xanthomonas leaf blight (Xanthomonas axonopodis pv. allii) is a yield-limiting disease of onion (Allium cepa) in the western United States. Frequent applications of copper-based bactericides amended with an ethylenebisdithiocarbamate fungicide (e.g., maneb or mancozeb, class B2 carcinogens) provide some disease suppression, but strategies to reduce conventional bactericide use are needed to minimize grower costs, environmental impact, and public exposure to class B2 pesticides. Applications of acibenzolar-S-methyl reduced in planta and epiphytic populations of X. axonopodis pv. allii as effectively as applications of copper hydroxide-mancozeb in growth chamber studies. Under field conditions, four weekly applications of acibenzolar-S-methyl reduced severity of Xanthomonas leaf blight as or more effectively than 9 to 12 weekly applications of copper hydroxide or copper hydroxide-mancozeb. Acibenzolar-S-methyl applications did not increase bulb yield or grade compared with copper bactericide treatments. However, bulb yield was reduced 22 to 27% when 10 weekly applications of acibenzolar-S-methyl were made in the absence of disease. Application of a commercial formulation of both Pantoea agglomerans strain C9-1 and Pseudomonas fluorescens strain A506 reduced severity of Xanthomonas leaf blight in field experiments. Weekly copper hydroxide applications starting 1 to 2 weeks before bulb initiation were as effective as weekly applications started 3 to 4 weeks before bulb initiation, irrespective of the maneb rate used. Integration of acibenzolar-S-methyl and biological control agents with copper hydroxide in a carefully timed spray program may eliminate the use of the class B2 carcinogens maneb and mancozeb on onion without compromising efficacy for management of Xanthomonas leaf blight.

Management of Xanthomonas Leaf Blight of Onion with Bacteriophages and a Plant Activator

Xanthomonas leaf blight of onion (Allium cepa), caused by Xanthomonas axonopodis pv. allii, continues to be a challenging and yield-threatening disease in Colorado and other regions of onion production worldwide. Studies were conducted to develop management strategies for this disease that are equally effective and more sustainable than the current practices of making multiple applications of copper bactericides. Mixtures of bacteriophages and the plant defense activator, acibenzolar-S-methyl, were evaluated under field and greenhouse conditions for their abilities to reduce Xanthomonas leaf blight severity. Bacteriophage populations in the phyllosphere of onion were monitored over time. Bacteriophage populations persisted on onion leaves for at least 72 to 96 h under field and greenhouse conditions, respectively. Under field conditions at one location, biweekly or weekly applications of bacteriophages reduced disease severity by 26 to 50%, which was equal to or better than weekly applications of copper hydroxide plus mancozeb. Acibenzolar-S-methyl also successfully reduced disease severity by up to 50% when used alone preventatively or followed by biweekly bacteriophage applications. Reductions in disease severity generally were not associated with improvements in onion bulb size or yield. Integration of bacteriophage mixtures with acibenzolar-S-methyl appears to be a promising strategy for managing Xanthomonas leaf blight of onion, and could reduce grower reliance on conventional copper bactericide applied with ethylenebisdithiocarbamate fungicides.

Inheritance of White Mold Resistance in Phaseolus vulgaris × P. coccineus Crosses

The fungus Sclerotinia sclerotiorum, cause of white mold, is known to attack >400 plant species. It is a widespread problem in dry bean (Phaseolus vulgaris) in the United States, causing >30% average yield losses. Low to moderate levels of resistance are found in dry bean. However, some accessions of P. coccineus (commonly known as scarlet runner bean) possess a relatively higher level of resistance. Our objective was to verify the reaction of 13 known white mold-resistant P. coccineus germ plasms and determine inheritance of resistance in accessions PI 433246 and PI 439534. Pinto Othello was crossed with PI 433246, and the resulting interspecific F1 was back-crossed onto Othello and allowed to produce F2 seed. Similarly, pinto UI 320 was crossed with PI 439534. The F1 was backcrossed onto UI 320 and allowed to produce F2 seed. The two parents, F1, F2, and backcross to dry bean of each set were evaluated in the greenhouse using the straw test at Fort Collins, CO in 2004. All 13 P. coccineus accessions and the two F2 also were evaluated using the modified petiole test at Kimberly, ID in 2005. All 13 P. coccineus accessions were variable in a 2002 straw test when rated for white mold reaction on a 1-to-9 scale, because the mean disease score ranged from 1.9 for PI 433246 to 4.4 for PI 189023 and 8.8 for the susceptible check Bill Z. For the petiole test, when rated on a 1-to-9 scale, the accessions exhibited an intermediate white mold score of 4 or 5 in 2005. In 2004, the susceptible check Othello exhibited a mean score of 7.9 compared with 3.4, 3.2, and 2.1 for PI 433246, UI 320, and PI 439534, respectively. The white mold reaction of PI 433246 and PI 439534 was dominant in their respective F1. The F2 segregation further indicated that white mold resistance in PI 433246 and PI 439534 was controlled by a single dominant gene. These two and other white mold-resistant P. coccineus accessions and selected breeding lines from the interspecific crosses should be useful for future improvement of white mold resistance of pinto and other market classes of dry and green or snap bean.

Effect of Commercial Adjuvants on Vegetable Crop Fungicide Coverage, Absorption, and Efficacy

The addition of an appropriate adjuvant with foliar fungicide can significantly improve coverage, absorption, and efficacy. Laboratory and field studies evaluated coverage, absorption, and efficacy of commercial adjuvants with diverse chemistries on multiple host-pathogen systems. Organosilicone-based adjuvants improved coverage by 26 to 38% compared with a latex spreader-sticker and water. Significant crop by coverage interaction effects were also detected. The organosilicone/methylated seed oil-based adjuvant, Aero Dyne-Amic, significantly improved total [14C]azoxystrobin absorption on onion and potato by 30 and 21%, respectively, compared with water. The spreader-sticker, Bond, improved [14C]azoxystrobin absorption on onion and dry bean by 41 and 39%, respectively, compared with water. In experimental field plots, dry bean rust incidence was reduced by 52% when Kinetic or Latron AG-98 was added to maneb compared with maneb alone. The area under the potato early blight disease progress curve was reduced 29, 24, or 21% when Kinetic, Bond, or Latron AG-98 was added to maneb, respectively, compared with maneb applications alone.

Inheritance of resistance to a Colorado race of Fusarium oxysporum f. sp. phaseoli in common beans

Fusarium wilt of common bean Phaseolus vulgaris caused by Fusarium oxysporum f. sp. phaseoli (FOP) is a serious disease in many production areas of the world. Inheritance of resistance in common bean to a pathogenic race of FOP isolated from pinto bean, U.I. 114, in Colorado was investigated. Resistant (R) and susceptible (S) common bean lines and cultivars from diverse sources were used as parents. The parental material, and F 2 and F 3 progeny derived from crosses between R and S lines were evaluated for reaction to FOP using a seedling root-clip inoculation technique under controlled greenhouse conditions. Inheritance of resistance to FOP differed among the parental lines and cultivars. Three segregation patterns were observed in the F 2 progeny of crosses between R and S parents. In one group, segregation patterns fit a single completely-dominant gene model (3R:1S), whereas segregation in the other group fit a more complex inheritance pattern in which recessive gene action controlled resistance to FOP. Other resistance patterns were more indicative of a quantitative pattern. Resistant lines that possessed single dominant genes for resistance originated from the Durango race, while resistant lines having recessive genetic resistance were from the Mesoamerican race of the Middle American Center of Diversity

Sequence diversity of the nucleoprotein gene of iris yellow spot virus (genus Tospovirus, family Bunyaviridae) isolates from the western region of the United States.

Summary.Iris yellow spot virus (IYSV), a tentative virus species in the genus Tospovirus and family Bunyaviridae, is considered a rapidly emerging threat to onion production in the western United States (US). The present study was undertaken to determine the sequence diversity of IYSV isolates from infected onion plants grown in California, Colorado, Idaho, Oregon, Utah and Washington. Using primers derived from the small RNA of IYSV, the complete sequence of the nucleoprotein (NP) gene of each isolate was determined and the sequences compared. In addition, a shallot isolate of IYSV from Washington was included in the study. The US isolates of IYSV shared a high degree of sequence identity (95 to 99%) with one another and to previously reported isolates. Phylogenetic analyses showed that with the exception of one isolate from central Oregon and one isolate from California, all the onion and shallot isolates from the western US clustered together. This cluster also included onion and lisianthus isolates from Japan. A second distinct cluster consisted of isolates from Australia (onion), Brazil (onion), Israel (lisianthus), Japan (alstroemeria), the Netherlands (iris) and Slovenia (leek). The IYSV isolates evaluated in this study appear to represent two distinct groups, one of which largely represents isolates from the western US. Understanding of the population structure of IYSV would potentially provide insights into the molecular epidemiology of this virus.

Epiphytic Survival of Xanthomonas axonopodis pv. allii and X. axonopodis pv. phaseoli on Leguminous Hosts and Onion

Xanthomonas leaf blight of onion (Allium cepa), caused by Xanthomonas axonopodis pv. allii, and common bacterial blight of dry bean (Phaseolus vulgaris), caused by Xanthomonas axonopodis pv. phaseoli, are perennial problems in the Central High Plains of the United States. Onion and dry bean are commonly grown in rotation in Colorado, but it is unknown if X. axonopodis pv. allii and X. axonopodis pv. phaseoli survive epiphytically or pathogenically on dry bean and onion, respectively. Under high humidity growth chamber conditions, epiphytic X. axonopodis pv. allii populations increased on alfalfa, chickpea, dry bean, lentil, and soybean, but the epiphytic populations were at least 10-fold greater on onion. When artificially inoculated under field conditions, epiphytic populations of X. axonopodis pv. allii were recovered from dry bean, lentil, and onion, but the bacterium did not persist on chickpea or soybean. Epiphytic X. axonopodis pv. phaseoli was recovered from symptomless onion plants in fields cropped to dry bean the prior year, but not from fields cropped to a host other than dry bean. Close rotation of onion and dry bean may allow X. axonopodis pv. allii and X. axonopodis pv. phaseoli to persist epiphytically, and crop rotation schemes may need to be altered to reduce survival of these pathogens in onion and dry bean cropping systems.