In Jung Kim

Dilute acid pretreatment of lignocellulose for whole slurry ethanol fermentation.

Dilute sulfuric acid pretreatment of oil palm empty fruit bunches (EFB) followed by the whole slurry fermentation of the pretreated EFB slurry was investigated. The optimized pretreatment conditions were at 1% (w/v) sulfuric acid with 3 min ramping to 190 °C in a microwave digester. Pretreated and washed EFB exhibited enzymatic digestibility of 88.5% of theoretical glucose yield after 48 h of hydrolysis. When the whole slurry of pretreated and neutralized EFB was used in simultaneous saccharification and fermentation (SSF) using cellulase and Saccharomyces cerevisiae, sulfuric acid-pretreated EFB resulted in 52.5% of theoretical ethanol yield based on total glucan in the untreated initial EFB after 72 h of SSF. When pretreated EFB slurry was treated with activated carbon before subjecting to SSF, the SSF furnished 87.5% ethanol yield based on the initial glucan content in untreated EFB (after 48 h of SSF).

Aqueous ammonia pretreatment of oil palm empty fruit bunches for ethanol production

Oil palm empty fruit bunches (EFB) were pretreated by aqueous ammonia soaking for ethanol production. Pretreated EFB, which were pretreated at the optimal conditions of 60 °C, 12 h, and 21% (w/w) aqueous ammonia, showed 19.5% and 41.4% glucose yields during an enzymatic digestibility test for 96 h when using 15 and 60 FPU of cellulase, respectively. Using the pretreated EFB, simultaneous saccharification and fermentation for 168 h with 5% (w/v) glucan loading and 60 FPU of cellulase and 30 CBU of β-glucosidase per gram glucan resulted in ethanol production of 18.6 g/L titer, 65.6% of theoretical maximum yield, and 0.11 g/L/h of productivity.

Ethanol production from oil palm trunks treated with aqueous ammonia and cellulase

Oil palm trunks are a possible lignocellulosic source for ethanol production. Low enzymatic digestibility of this type of material (11.9% of the theoretical glucose yield) makes pretreatment necessary. An enzymatic digestibility of 95.4% with insoluble solids recovery of 49.8% was achieved after soaking shredded oil palm trunks in ammonia under optimum conditions (80°C, 1:12 solid-to-liquid ratio, 8h and 7% (w/w) ammonia solution). Treatment with 60 FPU of commercial cellulase (Accellerase 1000) per gram of glucan and fermentation with Saccharomyces cerevisiae D(5)A resulted in an ethanol concentration of 13.3g/L and an ethanol yield of 78.3% (based on the theoretical maximum) after 96 h. These results indicate that oil palm trunks are a biomass feedstock that can be used for bioethanol production.

Synergistic proteins for the enhanced enzymatic hydrolysis of cellulose by cellulase

Reducing the enzyme loadings for enzymatic saccharification of lignocellulose is required for economically feasible production of biofuels and biochemicals. One strategy is addition of small amounts of synergistic proteins to cellulase mixtures. Synergistic proteins increase the activity of cellulase without causing significant hydrolysis of cellulose. Synergistic proteins exert their activity by inducing structural modifications in cellulose. Recently, synergistic proteins from various biological sources, including bacteria, fungi, and plants, were identified based on genomic data, and their synergistic activities were investigated. Currently, an up-to-date overview of several aspects of synergistic proteins, such as their functions, action mechanisms and synergistic activity, are important for future industrial application. In this review, we summarize the current state of research on four synergistic proteins: carbohydrate-binding modules, plant expansins, expansin-like proteins, and Auxiliary Activity family 9 (formerly GH61) proteins. This review provides critical information to aid in promoting research on the development of efficient and industrially feasible synergistic proteins.

Binding characteristics of a bacterial expansin (BsEXLX1) for various types of pretreated lignocellulose.

BsEXLX1 from Bacillus subtilis is the first discovered bacterial expansin as a structural homolog of a plant expansin, and it exhibited synergism with cellulase on the cellulose hydrolysis in a previous study. In this study, binding characteristics of BsEXLX1 were investigated using pretreated and untreated Miscanthus xgiganteus in comparison with those of CtCBD3, a cellulose-binding domain from Clostridium thermocellum. The amounts of BsEXLX1 bound to cellulose-rich substrates were significantly lower than those of CtCBD3. However, the amounts of BsEXLX1 bound to lignin-rich substrates were much higher than those of CtCBD3. A binding competition assay between BsEXLX1 and CtCBD3 revealed that binding of BsEXLX1 to alkali lignin was not affected by the presence of CtCBD3. This preferential binding of BsEXLX1 to lignin could be related to root colonization in plants by bacteria, and the bacterial expansin could be used as a lignin blocker in the enzymatic hydrolysis of lignocellulose.

Characteristics of the binding of a bacterial expansin (BsEXLX1) to microcrystalline cellulose.

Plant expansin proteins induce plant cell wall extension and have the ability to extend and disrupt cellulose. In addition, these proteins show synergistic activity with cellulases during cellulose hydrolysis. BsEXLX1 originating from Bacillus subtilis is a structural homolog of a β‐expansin produced by Zea mays (ZmEXPB1). The Langmuir isotherm for binding of BsEXLX1 to microcrystalline cellulose (i.e., Avicel) revealed that the equilibrium binding constant of BsEXLX1 to Avicel was similar to those of other Type A surface‐binding carbohydrate‐binding modules (CBMs) to microcrystalline cellulose, and the maximum number of binding sites on Avicel for BsEXLX1 was also comparable to those on microcrystalline cellulose for other Type A CBMs. BsEXLX1 did not bind to cellooligosaccharides, which is consistent with the typical binding behavior of Type A CBMs. The preferential binding pattern of a plant expansin, ZmEXPB1, to xylan, compared to cellulose was not exhibited by BsEXLX1. In addition, the binding capacities of cellulose and xylan for BsEXLX1 were much lower than those for CtCBD3. Biotechnol. Bioeng. 2013; 110: 401–407.

An expansin from the marine bacterium Hahella chejuensis acts synergistically with xylanase and enhances xylan hydrolysis.

HcEXLX2 is a bacterial expansin found in a marine bacterium, Hahella chejuensis. Previously, HcEXLX2 was reported to act synergistically with a commercial cellulase preparation on the cellulose hydrolysis. The aim of the present study was to investigate the possible synergistic activity of HcEXLX2 with an endo-type xylanase from Saccharophagus degradans 2-40(T) (Xyn10C) in the hydrolysis of xylan. When 160 μg of HcEXLX2 was incubated with 12 μg of Xyn10C, the yield of reducing sugar increased 3.1 times when compared to that without HcEXLX2. The optimal temperature and pH for the synergism of HcEXLX2 with Xyn10C were 30°C and pH 7, respectively. In addition, binding experiments revealed that HcEXLX2 binds to xylan more preferentially than to Avicel. These results imply that HcEXLX2 could be used as an accessory protein to boost the activity of xylanase if its synergistic effect is strengthened at lower dosages.

One-pot pretreatment, saccharification and ethanol fermentation of lignocellulose based on acid–base mixture pretreatment

Currently, for the production of cellulosic ethanol, multi-step unit operations, including pretreatment, solid/liquid (S/L) separation, solids washing, liquid detoxification, neutralization, enzymatic hydrolysis and fermentation, are the commonly required steps responsible for elevating the capital and operating costs. To simplify these steps, consolidated bioprocessing (CBP), focusing on the multi-functional microbial strains, was proposed. However, this process has not been commercialized yet. In this study, using an acid–base mixture as a pretreatment catalyst, pretreatment, saccharification and fermentation were performed in one pot without S/L separation, neutralization and detoxification. From the one-pot process based on the acid–base mixture pretreatment (190 °C, 2 min and 0.15 (w/v) acid–base mixture) and 15 FPU of cellulase per g glucan and Sacchromyces cerevisiae, 70.7% of the theoretical maximum ethanol yield (based on the initial amount of glucan in the untreated rice straw) was obtained. This was comparable to the estimated ethanol yield of 72.9%, assuming a 90% glucan recovery yield after pretreatment × a 90% glucose yield from saccharification × a 90% ethanol yield from ethanol fermentation performed in three separate pots. These results suggest that the entire slurry processing of lignocellulose in one pot could be an attractive way to achieve economic sustainability in the production of fuel from lignocellulose.

Customized optimization of cellulase mixtures for differently pretreated rice straw

Lignocellulose contains a large amount of cellulose but is recalcitrant to enzymatic hydrolysis, which yields sugars for fuels or chemicals. Various pretreatment methods are used to improve the enzymatic digestibility of cellulose in lignocellulose. Depending on the lignocellulose types and pretreatment methods, biomass compositions and physical properties significantly vary. Therefore, customized enzyme mixtures have to be employed for the efficient hydrolysis of pretreated lignocellulose. Here, using three recombinant model enzymes consisting of endoglucanase, cellobiohydrolase, and xylanase with a fixed amount of β-glucosidase, the optimal formulation of enzyme mixtures was designed for two differently pretreated rice straws (acid-pretreated or alkali-pretreated rice straw) by the mixture design methodology. As a result, different optimal compositions for the enzyme mixtures were employed depending on the type of pretreatment of rice straw. These results suggest that customized enzyme mixtures for pretreated lignocellulosic biomass are necessary to obtain increased sugar yields and should be considered in the industrial utilization of lignocellulose.

Type-dependent action modes of TtAA9E and TaAA9A acting on cellulose and differently pretreated lignocellulosic substrates

BackgroundLytic polysaccharide monooxygenase (LPMO) is a group of recently identified proteins that catalyze oxidative cleavage of the glycosidic linkages of cellulose and other polysaccharides. By utilizing the oxidative mode of action, LPMOs are able to enhance the efficiency of cellulase in the hydrolysis of cellulose. Particularly, auxiliary activity family 9 (AA9) is a group of fungal LPMOs that show a type-dependent regioselectivity on cellulose in which Types 1, 2, and 3 hydroxylate at C1, C4, and C1 and C4 positions, respectively. In this study, we investigated comparative characteristics of TtAA9E from Thielavia terrestris belonging to Type 1 and TaAA9A from Thermoascus aurantiacus belonging to Type 3 on cellulose and pretreated lignocellulose.ResultsFrom product analysis, TtAA9E dominantly generated oligosaccharides with an aldonic acid form, which is an evidence of C1 oxidation, while TaAA9A generated oligosaccharides with both aldonic acid and 4-ketoaldose forms, which is evidence of C1 and C4 oxidations, respectively. For hydrolysis of cellulose (Avicel) by cellulase, higher synergism was observed for TtAA9E than for TaAA9A. For hydrolysis of pretreated lignocellulose using rice straw, synergistic behaviors of TtAA9E and TaAA9A were different depending on the pretreatment of rice straw. Specifically, on acid-pretreated rice straw, TtAA9E showed a higher synergism than TaAA9A while on alkali-pretreated rice straw, TaAA9A showed a higher synergism than TtAA9E.ConclusionsWe show type-dependent action modes of TtAA9E and TaAA9A for cellulose oxidation together with substrate-dependent synergistic hydrolysis of cellulosic substrates. The results obtained from this study indicate the different behaviors of AA9s on cellulose and pretreated lignocellulose, suggesting a selection of AA9 proteins specific to substrates is required for industrial utilization.