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Dive into the research topics where Ioannis N. Papadopoulos is active.

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Featured researches published by Ioannis N. Papadopoulos.


Optics Express | 2012

Focusing and scanning light through a multimode optical fiber using digital phase conjugation

Ioannis N. Papadopoulos; Salma Farahi; Christophe Moser; Demetri Psaltis

We demonstrate for the first time to our knowledge a digital phase conjugation technique for generating a sharp focus point at the end of a multimode optical fiber. A sharp focus with a contrast of 1800 is experimentally obtained at the tip of a 105 μm core multimode fiber. Scanning of the focal point is also demonstrated by digital means. Effects from illumination and fiber bending are addressed.


Biomedical Optics Express | 2013

High-resolution, lensless endoscope based on digital scanning through a multimode optical fiber

Ioannis N. Papadopoulos; Salma Farahi; Christophe Moser; Demetri Psaltis

We propose and experimentally demonstrate an ultra-thin rigid endoscope (450 μm diameter) based on a passive multimode optical fiber. We use digital phase conjugation to overcome the modal scrambling of the fiber to tightly focus and scan the laser light at its distal end. By exploiting the maximum number of modes available, sub-micron resolution, high quality fluorescence images of neuronal cells were acquired. The imaging system is evaluated in terms of fluorescence collection efficiency, resolution and field of view. The small diameter of the proposed endoscope, along with its high quality images offer an opportunity for minimally invasive medical endoscopic imaging and diagnosis based on cellular phenotype via direct tissue penetration.


arXiv: Optics | 2015

Learning approach to optical tomography

Ulugbek S. Kamilov; Ioannis N. Papadopoulos; Morteza H. Shoreh; Alexandre Goy; Cédric Vonesch; Michael Unser; Demetri Psaltis

Optical tomography has been widely investigated for biomedical imaging applications. In recent years optical tomography has been combined with digital holography and has been employed to produce high-quality images of phase objects such as cells. In this paper we describe a method for imaging 3D phase objects in a tomographic configuration implemented by training an artificial neural network to reproduce the complex amplitude of the experimentally measured scattered light. The network is designed such that the voxel values of the refractive index of the 3D object are the variables that are adapted during the training process. We demonstrate the method experimentally by forming images of the 3D refractive index distribution of Hela cells.


Nature Physics | 2015

Translation correlations in anisotropically scattering media

Benjamin Judkewitz; Roarke Horstmeyer; Ivo Micha Vellekoop; Ioannis N. Papadopoulos; Changhuei Yang

Controlling light propagation across scattering media by wavefront shaping holds great promise for a wide range of communications and imaging applications. But, finding the right shape for the wavefront is a challenge when the mapping between input and output scattered wavefronts (that is, the transmission matrix) is not known. Correlations in transmission matrices, especially the so-called memory effect, have been exploited to address this limitation. However, the traditional memory effect applies to thin scattering layers at a distance from the target, which precludes its use within thick scattering media, such as fog and biological tissue. Here, we theoretically predict and experimentally verify new transmission matrix correlations within thick anisotropically scattering media, with important implications for biomedical imaging and adaptive optics.


Optics Express | 2013

Dynamic bending compensation while focusing through a multimode fiber

Salma Farahi; David Ziegler; Ioannis N. Papadopoulos; Demetri Psaltis; Christophe Moser

Multimode fiber endoscopes have recently been shown to provide sub-micrometer resolution, however, imaging through a multimode fiber is highly sensitive to bending. Here we describe the implementation of a coherent beacon source placed at the distal tip of the multimode fiber, which can be used to compensate for the effects of bending. In the first part of this paper, we show that a diffraction limited focused spot can be generated at the distal tip of the multimode fiber using the beacon. In the second part, we demonstrate focusing even when the fiber is bent by dynamically compensating for it. The speckle pattern at the proximal fiber end, generated by the beacon source placed at its distal end, is highly dependent on the fiber conformation. We experimentally show that by intensity correlation, it is possible to identify the fiber conformation and maintain a focus spot while the fiber is bent over a certain range. Once the fiber configuration is determined, previously calibrated phase patterns could be stored for each fiber conformation and used to scan the distal spot and perform imaging.


Optics Express | 2015

Delivery of focused short pulses through a multimode fiber.

Edgar E. Morales-Delgado; Salma Farahi; Ioannis N. Papadopoulos; Demetri Psaltis; Christophe Moser

Light propagation through multimode fibers suffers from spatial distortions that lead to a scrambled intensity profile. In previous work, the correction of such distortions using various wavefront control methods has been demonstrated in the continuous wave case. However, in the ultra-fast pulse regime, modal dispersion temporally broadens a pulse after propagation. Here, we present a method that compensates for spatial distortions and mitigates temporal broadening due to modal dispersion by a selective phase conjugation process in which only modes of similar group velocities are excited. The selectively excited modes are forced to follow certain paths through the multimode fiber and interfere constructively at the distal tip to form a focused spot with minimal temporal broadening. We demonstrate the delivery of focused 500 fs pulses through a 30 cm long step-index multimode fiber. The achieved pulse duration corresponds to approximately 1/30th of the duration obtained if modal dispersion was not controlled. Moreover, we measured a detailed two-dimensional map of the pulse duration at the output of the fiber and confirmed that the focused spot produces a two-photon absorption effect. This work opens new possibilities for ultra-thin multiphoton imaging through multimode fibers.


Optics Express | 2015

Digital confocal microscopy through a multimode fiber.

Damien Loterie; Salma Farahi; Ioannis N. Papadopoulos; Alexandre Goy; Demetri Psaltis; Christophe Moser

Confocal laser-scanning microscopy is a well-known optical imaging method where a pinhole is used in the illumination and detection pathways of a normal microscope, in order to selectively excite and detect a particular focal volume. The advantage of this method is a significant increase in contrast, due to the rejection of background contributions to the signal. Here, we propose to apply this method in the context of multimode fiber endoscopy. Due to modal scrambling, it is not possible to use a physical pinhole to filter light signals that have travel through multimode fibers. Instead, we use a transmission matrix approach to characterize the propagation of light through the fiber, and we apply the filtering operation in the digital domain.


Optics Letters | 2013

Increasing the imaging capabilities of multimode fibers by exploiting the properties of highly scattering media

Ioannis N. Papadopoulos; Salma Farahi; Christophe Moser; Demetri Psaltis

We present a design that exploits the focusing properties of scattering media to increase the resolution and the working distance of multimode fiber (MMF)-based imaging devices. Placing a highly scattering medium in front of the distal tip of the MMF enables the formation of smaller sized foci at increased working distances away from the fiber tip. We perform a parametric study of the effect of the working distance and the separation between the fiber and the scattering medium on the focus size. We experimentally demonstrate submicrometer focused spots as far away as 800 μm with 532 nm light.


IEEE Transactions on Computational Imaging | 2016

Optical Tomographic Image Reconstruction Based on Beam Propagation and Sparse Regularization

Ulugbek S. Kamilov; Ioannis N. Papadopoulos; Morteza H. Shoreh; Alexandre Goy; Cédric Vonesch; Michael Unser; Demetri Psaltis

Optical tomographic imaging requires an accurate forward model as well as regularization to mitigate missing-data artifacts and to suppress noise. Nonlinear forward models can provide more accurate interpretation of the measured data than their linear counterparts, but they generally result in computationally prohibitive reconstruction algorithms. Although sparsity-driven regularizers significantly improve the quality of reconstructed image, they further increase the computational burden of imaging. In this paper, we present a novel iterative imaging method for optical tomography that combines a nonlinear forward model based on the beam propagation method (BPM) with an edge-preserving three-dimensional (3-D) total variation (TV) regularizer. The central element of our approach is a time-reversal scheme, which allows for an efficient computation of the derivative of the transmitted wave-field with respect to the distribution of the refractive index. This time-reversal scheme together with our stochastic proximal-gradient algorithm makes it possible to optimize under a nonlinear forward model in a computationally tractable way, thus enabling a high-quality imaging of the refractive index throughout the object. We demonstrate the effectiveness of our method through several experiments on simulated and experimentally measured data.


Applied Physics Letters | 2013

Optical-resolution photoacoustic microscopy by use of a multimode fiber

Ioannis N. Papadopoulos; Olivier Simandoux; Salma Farahi; Jean Pierre Huignard; Emmanuel Bossy; Demetri Psaltis; Christophe Moser

We demonstrate Optical-Resolution Photoacoustic Microscopy (OR-PAM), where the optical field is focused and scanned using Digital Phase Conjugation through a multimode fiber. The focus is scanned across the field of view using digital means, and the acoustic signal induced is collected by a transducer. Optical-resolution photoacoustic images of a knot made by two absorptive wires are obtained and we report on resolution smaller than 1.5u2009μm across a 201u2009μmu2009×u2009201u2009μm field of view. The use of a multimode optical fiber for the optical excitation part can pave the way for miniature endoscopes that can provide optical-resolution photoacoustic images at large optical depth.

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Demetri Psaltis

École Polytechnique Fédérale de Lausanne

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Christophe Moser

École Polytechnique Fédérale de Lausanne

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Salma Farahi

École Polytechnique Fédérale de Lausanne

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Roarke Horstmeyer

California Institute of Technology

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Alexandre Goy

École Polytechnique Fédérale de Lausanne

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Michael Unser

École Polytechnique Fédérale de Lausanne

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Ulugbek S. Kamilov

Mitsubishi Electric Research Laboratories

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Cédric Vonesch

École Polytechnique Fédérale de Lausanne

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