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Dive into the research topics where Jack Cochran is active.

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Featured researches published by Jack Cochran.


Talanta | 2004

Measurement of PCDDs, PCDFs, and non-ortho-PCBs by comprehensive two-dimensional gas chromatography-isotope dilution time-of-flight mass spectrometry (GC × GC-IDTOFMS)

Jean-François Focant; Eric J. Reiner; Karen MacPherson; Terry Kolic; Andreas Sjödin; Donald G. Patterson; Shawn Reese; Frank L. Dorman; Jack Cochran

Comprehensive two-dimensional gas chromatography with isotope-dilution time-of-flight mass spectrometry (GC x GC-IDTOFMS) was used to measure polychlorinated dibenzo-p-dioxin (PCDD), polychlorinated dibenzofuran (PCDF), and coplanar polychlorinated biphenyl (cPCB) concentrations in ash, sediment, vegetation, and fish samples. The GC x GC capability was achieved by using a quad jet, dual stage, thermal modulator. Zone compression of the GC peaks from modulation resulted in a significant increase of the signal intensity over classical GC-IDTOFMS. The GC x GC column set used an Rtx-Dioxin 2 phase as the first dimension ((1)D ) and an Rtx-500 as the second dimension ((2)D ). The chromatographic separation of the 17 PCDD/Fs and the 4 cPCBs was attained in (1)D except for 2,3,7,8-TCDD and CB126 for which deconvoluted ion currents (DIC) were required to be reported separately. The Rtx-500 phase separated the bulk matrix interfering compounds from the target analytes in (2)D . The instrumental limit of detection (iLODs) was 0.5pg for 2,3,7,8-TCDD. The calibration curves showed good correlation coefficients for all the compounds investigated in the concentration range of 0.5-200pg. GC x GC-IDTOFMS results compared favorably to those from conventional isotope-dilution one-dimensional gas chromatography-high resolution mass spectrometry (GC-IDHRMS). The comprehensive mass analysis of the TOFMS further permitted the identification of other contaminants of concern in the samples.


Chemosphere | 2011

Comprehensive two-dimensional gas chromatography time of flight mass spectrometry (GC × GC-TOFMS) for environmental forensic investigations in developing countries

Jayne De Vos; Roger D. Dixon; Gerhard Vermeulen; Peter Gorst-Allman; Jack Cochran; Egmont Richard Rohwer; Jean-François Focant

The disposal and dumping of toxic waste is a matter of growing concern in developing countries, including South Africa. Frequently these countries do not possess access to gas chromatography-high resolution mass spectrometry (GC-HRMS) for the determination of persistent organic pollutants (POPs). This publication describes an alternative approach to the investigation of toxic waste using comprehensive gas chromatography coupled to time of flight mass spectrometry (GC×GC-TOFMS). The technology permits both comprehensive screening of toxic samples for numerous classes of organic pollutants and also quantitative analysis for the individual compounds. This paper describes the use of this technique by analysing samples obtained from a hazardous waste treatment facility in South Africa. After sampling and extraction the samples were analysed for polychlorinated dibenzo-p-dioxins (PCDDs), polychlorinated dibenzofurans (PCDFs) and four dioxin-like non-ortho substituted polychlorinated biphenyls (PCBs). The quantitative values, as well as detection limits, obtained using the GC×GC-TOFMS methodology compares well with those obtained using GC-HRMS; the accepted benchmark technology for this analysis. Although GC×GC-TOFMS is not a target compound analytical technique (as is GC-HRMS), it is possible to obtain information on numerous other classes of organic pollutants present in the samples in one analytical run. This is not possible with GC-HRMS. Several different column combinations have been investigated for handling very complex waste samples and suggestions are presented for the most suitable combination.


Journal of Chromatography A | 2015

Evaluation of conditions of comprehensive two-dimensional gas chromatography that yield a near-theoretical maximum in peak capacity gain☆

Matthew S. Klee; Jack Cochran; Mark Merrick; Leonid M. Blumberg

The peak capacity gain (Gn) of a GC×GC system is the ratio of the system peak capacity to that of an optimized one-dimensional GC analysis lasting the same time and providing the same detection limit. A near-theoretical maximum in Gn has been experimentally demonstrated in GC×GC-TOF based on a 60m×0.25mm primary column. It was found that Gn was close to 9 compared to the theoretical maximum of about 11 for this system. A six-sigma peak capacity of 4500 was obtained during an 80min heating ramp from 50°C to 320°C. Using peak deconvolution, 2242 individual peaks were determined in a Las Vegas runoff water sample. This is the first definitive experimental demonstration known to us of an order-of-magnitude Gn. The key factors enabling this gain were: relatively sharp (about 20ms at half height) reinjection pulses into the secondary column, relatively long (60m) primary column, the same diameters in primary and secondary columns, relatively low retention factor at the end of the secondary analysis (k≅5 instead of 15, optimal for ideal conditions), optimum flow rate in both columns, and helium (rather than hydrogen) used as the carrier gas. The latter, while making the analysis 65% longer than if using H2, was a better match to the reinjection bandwidth and cycle time.


Journal of Chromatography A | 2008

Evaluation of comprehensive two-dimensional gas chromatography - time-of-flight mass spectrometry for the determination of pesticides in tobacco.

Jack Cochran

Comprehensive two-dimensional gas chromatography (GC x GC) with fast acquisition time-of-flight (TOF) mass spectrometry (MS) was used to analyze a tobacco extract for pesticides. The emphasis was on qualitative characterization of the sample, using automated peak find and spectral deconvolution software to identify 14 pesticides in the extract. Two additional pesticides were located based on manual review of the data. Matrix-matched standards of tobacco extract spiked with 2.5 to 50 ng/mL concentrations of numerous organochlorine and organophosphorus pesticides were used to demonstrate linearity and the GC x GC benefit of eliminating interferences that might contribute to quantification bias.


Journal of Chromatography A | 2008

Using computer modeling to predict and optimize separations for comprehensive two-dimensional gas chromatography

Frank L. Dorman; Paul D. Schettler; Leslie A. Vogt; Jack Cochran

In order to fully realize the separation power of comprehensive two-dimensional gas chromatography (GC x GC), a means of predicting and optimizing separations based on operating variables was developed. This approach initially calculates the enthalpy (DeltaH) and entropy (DeltaS) for the target compounds from experimental input data, and then uses this information to simultaneously optimize all column and runtime variables, including stationary phase composition, by comparing the performance of large numbers of simulated separations. This use of computer simulation has been shown to be a useful aid in conventional separations. It becomes almost essential for GC x GC optimization because of the large number of variables involved and their very complex interaction. Agreement between experimental and predicted values of standard test samples (Grob mix) using GC x GC separation shows that this approach is accurate. We believe that this success can be extended to more challenging mixtures resulting in optimizations that are simpler and transferable between GC x GC instruments.


Analytical Chemistry | 2016

Capturing Plant Metabolome with Direct-Immersion in Vivo Solid Phase Microextraction of Plant Tissues

Sanja Risticevic; Érica A. Souza-Silva; Jennifer R. DeEll; Jack Cochran; Janusz Pawliszyn

For the first time, an in vivo sampling mode of direct immersion-solid phase microextraction (DI-SPME) was employed to capture the metabolome of living plant specimens, using apple (Malus × domestica Borkh.) as a model system. Metabolites were extracted from apple tissues and introduced by thermal desorption into a comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry instrument. The feasibility of this sampling approach, based on exploitation of microextraction principles, including negligible depletion of free analyte concentrations, solventless sampling and sample preparation, and on-site compatibility, was determined in global metabolite analysis. Rather than adopting an approach of traditional sample preparation, requiring metabolism quenching and laborious sample preparation, the objective of the study was to capture the metabolome in vivo, evaluate the feasibility of the approach to provide unbiased extraction coverage, and compare analytical precision when different SPME sampling modes are employed. The potential of in vivo DI-SPME in quantitative plant metabolomics was assessed by evaluating changes in metabolic fingerprints in response to fruit maturation. The in vivo SPME sampling approach has been demonstrated as capable of sampling living systems with high reproducibility, considering that nearly 50% of hundreds of evaluated compounds included in the determination of analytical performance met the 15% RSD FDA criterion. Esters were extracted with high repeatability (% RSD for hexyl butanoate and butyl butanoate of 16.5 and 5.9, respectively, from 9 determinations in 3 apples) and found to be upregulated in response to apple fruit maturation.


Journal of Chromatography A | 2014

Comprehensive characterization of the halogenated dibenzo-p-dioxin and dibenzofuran contents of residential fire debris using comprehensive two-dimensional gas chromatography coupled to time of flight mass spectrometry.

Kari L. Organtini; Anne L. Myers; Karl J. Jobst; Jack Cochran; Brian Ross; Brian E. McCarry; Eric J. Reiner; Frank L. Dorman

A comprehensive approach was taken to characterize the polyhalogenated dibenzo-p-dioxin and dibenzofuran contents of fire debris. Household and electronics fire simulations were performed to create samples representative of those firefighters most typically come in contact with. Sample analysis was performed using GC×GC-TOFMS to provide a comprehensive profile of the halogenated dioxins and furans present among the two types of fire debris. Both the household fire and electronics fire simulations produced a significant amount of polybrominated dibenzofurans. Only the electronics rich fire simulation produced mixed halogenated (Br/Cl) dibenzofurans in amounts above the limit of detection of the analytical method. Of the mixed halogenated dibenzofurans identified, a majority were those having no commercially available standard to allow for specific congener identification. GC×GC-TOFMS was extremely beneficial for the identification of compound classes due to the manner in which compounds classify in the two-dimensional chromatographic plane, thus aiding data reduction for these materials.


Journal of Chromatography A | 2010

Characterization of military fog oil by comprehensive two-dimensional gas chromatography

Anja Kohl; Jack Cochran; Donald M. Cropek

The most commonly used military fog oil is characterized by comprehensive two-dimensional gas chromatography (GC x GC) coupled to either Flame Ionization Detection (FID) or Time-of-Flight Mass Spectrometric Detection (TOFMS) to advance the knowledge regarding the complete chemical makeup of this complex matrix. Two different GC x GC column sets were investigated, one employing a non-polar column combined with a shape selective column and the other an inverse column set (medium-polar/non-polar). The inverse set maximizes the use of the two-dimensional separation space and segregates aliphatic from aromatic fractions. The shape selective column best separates individual polycyclic aromatic hydrocarbons (PAHs) from the bulk oil. The results reveal that fog oil (FO) is composed mainly of aliphatic compounds ranging from C(10) to C(30), where naphthenes comprise the major fraction. Although many different species of aromatics are present, they constitute only a minor fraction in this oil, and no conjugated PAHs are found. The composition of chemically similar aliphatic constituents limits the analytical power of silica gel fractionation and GC-MS analysis to characterize FO. Among the aliphatic compounds identified are alkanes, cyclohexanes, hexahydroindanes, decalins, adamantanes, and bicyclohexane. The aromatic fraction is composed of alkylbenzene compounds, indanes, tetrahydronaphthalenes, partially hydrogenated PAHs, biphenyls, dibenzofurans and dibenzothiophenes. This work represents the best characterization of military fog oil to date. As the characterization process shows, information on such complex samples can only be parsed using a combination of sample preprocessing steps, multiple detection schemes, and an intelligent selection of column chemistries.


Analytical Chemistry | 2015

Response to the Comment on Comparison of Atmospheric Pressure Ionization Gas Chromatography-Triple Quadrupole Mass Spectrometry to Traditional High-Resolution Mass Spectrometry for the Identification and Quantification of Halogenated Dioxins and Furans

Kari L. Organtini; Liad Haimovici; Karl J. Jobst; Eric J. Reiner; Adam Ladak; Douglas Stevens; Jack Cochran; Frank L. Dorman

The goal of this study was to qualify gas chromatography coupled to atmospheric pressure ionization tandem mass spectrometry (APGC-MS/MS) as a reliable and valid technique for analysis of halogenated dioxins and furans that could be used in place of more traditional gas chromatography coupled to high-resolution mass spectrometry (GC-HRMS) analysis. A direct comparison of the two instrumental techniques was performed. APGC-MS/MS system sensitivity was demonstrated to be on the single femtogram level. The APGC-MS/MS analysis also demonstrated method detection limits (MDLs) in both sediment and fish that were 2–18 times lower than those determined for the GC-HRMS. Inlet conditions were established to prevent issues with sample carry-over, due largely to the enhanced sensitivity of this technique. Additionally, this work utilized direct injection for sample introduction through the split/splittless inlet. Finally, quantification of both sediment and fish certified reference materials were directly compared be...


Journal of Separation Science | 2009

Simplifying the setup for vacuum-outlet GC: Using a restriction inside the injection port

Jaap de Zeeuw; Shawn Reese; Jack Cochran; Scott L. Grossman; Thomas E. Kane; Chris English

The application of vacuum GC has several advantages over pressurized GC. One of the key characteristics is that the optimal gas velocity is very high. Combined with short capillary columns of wide internal diameter, this results in short analysis times using standard GC-MS equipment. To make vacuum GC possible using a GC-MS system, a restriction must be positioned at the injection side of the column. This restriction is usually made of deactivated 0.1 mm i.d. fused-silica tubing which is coupled to the analytical column. Such restrictions will work, but practical challenges are found in coupling, reducing dead volume and robustness. A new way of making restrictions is by incorporating the restriction into the injection port. Using well-defined short pieces of fused silica with internal diameter of 0.025 mm, one can make a restriction using a Press-Tight type connector, and position this inside the injection port. By doing this, the restriction is very short and at high temperature all the time. Activity plays a minimal role, and also leaks will not be an issue as the coupling is in 100% inert gas. Data obtained using this concept is promising as vacuum GC becomes easier and more robust.

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Frank L. Dorman

Pennsylvania State University

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Eric J. Reiner

Ontario Ministry of the Environment

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Andreas Sjödin

Centers for Disease Control and Prevention

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Donald G. Patterson

Centers for Disease Control and Prevention

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Karen MacPherson

Ontario Ministry of the Environment

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Donald M. Cropek

United States Army Corps of Engineers

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Jonathan Smuts

University of Texas at Arlington

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