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Featured researches published by Jakub Elcner.


Proceedings of the Institution of Mechanical Engineers, Part H: Journal of Engineering in Medicine | 2012

Development of a realistic human airway model

Frantisek Lizal; Jakub Elcner; Philip K. Hopke; Jan Jedelsky; Miroslav Jicha

Numerous models of human lungs with various levels of idealization have been reported in the literature; consequently, results acquired using these models are difficult to compare to in vivo measurements. We have developed a set of model components based on realistic geometries, which permits the analysis of the effects of subsequent model simplification. A realistic digital upper airway geometry except for the lack of an oral cavity has been created which proved suitable both for computational fluid dynamics (CFD) simulations and for the fabrication of physical models. Subsequently, an oral cavity was added to the tracheobronchial geometry. The airway geometry including the oral cavity was adjusted to enable fabrication of a semi-realistic model. Five physical models were created based on these three digital geometries. Two optically transparent models, one with and one without the oral cavity, were constructed for flow velocity measurements, two realistic segmented models, one with and one without the oral cavity, were constructed for particle deposition measurements, and a semi-realistic model with glass cylindrical airways was developed for optical measurements of flow velocity and in situ particle size measurements. One-dimensional phase doppler anemometry measurements were made and compared to the CFD calculations for this model and good agreement was obtained.


European Journal of Pharmaceutical Sciences | 2017

Regional aerosol deposition in the human airways: the SimInhale benchmark case and a critical assessment of in silico methods

P.G. Koullapis; Stavros Kassinos; J. Muela; C. Perez-Segarra; J. Rigola; O. Lehmkuhl; Y. Cui; M. Sommerfeld; Jakub Elcner; Miroslav Jicha; I. Saveljic; Nenad Filipovic; Frantisek Lizal; Laura Nicolaou

Abstract Regional deposition effects are important in the pulmonary delivery of drugs intended for the topical treatment of respiratory ailments. They also play a critical role in the systemic delivery of drugs with limited lung bioavailability. In recent years, significant improvements in the quality of pulmonary imaging have taken place, however the resolution of current imaging modalities remains inadequate for quantifying regional deposition. Computational Fluid‐Particle Dynamics (CFPD) can fill this gap by providing detailed information about regional deposition in the extrathoracic and conducting airways. It is therefore not surprising that the last 15 years have seen an exponential growth in the application of CFPD methods in this area. Survey of the recent literature however, reveals a wide variability in the range of modelling approaches used and in the assumptions made about important physical processes taking place during aerosol inhalation. The purpose of this work is to provide a concise critical review of the computational approaches used to date, and to present a benchmark case for validation of future studies in the upper airways. In the spirit of providing the wider community with a reference for quality assurance of CFPD studies, in vitro deposition measurements have been conducted in a human‐based model of the upper airways, and several groups within MP1404 SimInhale have computed the same case using a variety of simulation and discretization approaches. Here, we report the results of this collaborative effort and provide a critical discussion of the performance of the various simulation methods. The benchmark case, in vitro deposition data and in silico results will be published online and made available to the wider community. Particle image velocimetry measurements of the flow, as well as additional numerical results from the community, will be appended to the online database as they become available in the future. Graphical Abstract Figure. No caption available.


Inhalation Toxicology | 2017

Multicomponent aerosol particle deposition in a realistic cast of the human upper respiratory tract

Markus Nordlund; Miloslav Belka; Arkadiusz K. Kuczaj; Frantisek Lizal; Jan Jedelsky; Jakub Elcner; Miroslav Jicha; Youri Sauser; Soazig Le Bouhellec; Stéphane Cosandey; Shoaib Majeed; Gregory Vuillaume; Manuel C. Peitsch; Julia Hoeng

Abstract Inhalation of aerosols generated by electronic cigarettes leads to deposition of multiple chemical compounds in the human airways. In this work, an experimental method to determine regional deposition of multicomponent aerosols in an in vitro segmented, realistic human lung geometry was developed and applied to two aerosols, i.e. a monodisperse glycerol aerosol and a multicomponent aerosol. The method comprised the following steps: (1) lung cast model preparation, (2) aerosol generation and exposure, (3) extraction of deposited mass, (4) chemical quantification and (5) data processing. The method showed good agreement with literature data for the deposition efficiency when using a monodisperse glycerol aerosol, with a mass median aerodynamic diameter (MMAD) of 2.3 μm and a constant flow rate of 15 L/min. The highest deposition surface density rate was observed in the bifurcation segments, indicating inertial impaction deposition. The experimental method was also applied to the deposition of a nebulized multicomponent aerosol with a MMAD of 0.50 μm and a constant flow rate of 15 L/min. The deposited amounts of glycerol, propylene glycol and nicotine were quantified. The three analyzed compounds showed similar deposition patterns and fractions as for the monodisperse glycerol aerosol, indicating that the compounds most likely deposited as parts of the same droplets. The developed method can be used to determine regional deposition for multicomponent aerosols, provided that the compounds are of low volatility. The generated data can be used to validate aerosol deposition simulations and to gain insight in deposition of electronic cigarette aerosols in human airways.


THE APPLICATION OF EXPERIMENTAL AND NUMERICAL METHODS IN FLUID MECHANICS AND ENERGY 2016: XX. Anniversary of International Scientific Conference | 2016

Study of airflow during respiratory cycle in semi-realistic model of human tracheobronchial tree

Jakub Elcner; Matouš Zaremba; Milan Maly; Jan Jedelsky; Frantisek Lizal; Miroslav Jicha

This article deals with study of airflow under breathing process, which is characteristic by unsteady behavior. Simulations provided by computational fluid dynamics (CFD) was compared with experiments performed on similar geometry of human upper airways. This geometry was represented by mouth cavity of realistic shape connected to an idealized tracheobronchial tree up to fourth generation of branching. Commercial CFD software Star-CCM+ was used to calculate airflow inside investigated geometry and method of Reynolds averaging of Navier-Stokes equations was used for subscribing the turbulent behavior through model geometry. Conditions corresponding to resting state were considered. Comparisons with experiments were provided on several points through trachea and bronchial tree and results with respect to inspiratory and respiratory part of breathing cycle was discussed.


Biomechanics and Modeling in Mechanobiology | 2016

Numerical investigation of inspiratory airflow in a realistic model of the human tracheobronchial airways and a comparison with experimental results

Jakub Elcner; Frantisek Lizal; Jan Jedelsky; Miroslav Jicha; Michaela Chovancova


Journal of Aerosol Science | 2018

Simulation of size-dependent aerosol deposition in a realistic model of the upper human airways

E.M.A. Frederix; Arkadiusz K. Kuczaj; Markus Nordlund; Miloslav Bělka; Frantisek Lizal; Jan Jedelský; Jakub Elcner; Miroslav Jicha; Bernardus J. Geurts


EPJ Web of Conferences | 2014

The pressure gradient in the human respiratory tract

Michaela Chovancova; Jakub Elcner


EPJ Web of Conferences | 2015

Measurement of Cyclic Flows in Trachea Using PIV and Numerical simulation

Miloslav Bělka; Jakub Elcner; Jan Jedelský; Olivier Boiron; Yannick Knapp; Lucie Bailly


EPJ Web of Conferences | 2015

Study of airflow in the trachea of idealized model of human tracheobronchial airways during breathing cycle

Jakub Elcner; Frantisek Lizal; Jan Jedelsky; Miroslav Jicha


EPJ Web of Conferences | 2013

Velocity profiles in idealized model of human respiratory tract

Jakub Elcner; Jan Jedelsky; Frantisek Lizal; Miroslav Jicha

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Miroslav Jicha

Brno University of Technology

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Frantisek Lizal

Brno University of Technology

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Jan Jedelsky

Brno University of Technology

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Michaela Chovancova

Brno University of Technology

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Jan Jedelský

Brno University of Technology

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Miloslav Belka

Brno University of Technology

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Miloslav Bělka

Brno University of Technology

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Filip Mravec

Brno University of Technology

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