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Frontiers in Neuroinformatics | 2012

Data sharing in neuroimaging research

Jean-Baptiste Poline; Janis L. Breeze; Satrajit S. Ghosh; Krzysztof J. Gorgolewski; Yaroslav O. Halchenko; Michael Hanke; Christian Haselgrove; Karl G. Helmer; David B. Keator; Daniel S. Marcus; Russell A. Poldrack; Yannick Schwartz; John Ashburner; David N. Kennedy

Significant resources around the world have been invested in neuroimaging studies of brain function and disease. Easier access to this large body of work should have profound impact on research in cognitive neuroscience and psychiatry, leading to advances in the diagnosis and treatment of psychiatric and neurological disease. A trend toward increased sharing of neuroimaging data has emerged in recent years. Nevertheless, a number of barriers continue to impede momentum. Many researchers and institutions remain uncertain about how to share data or lack the tools and expertise to participate in data sharing. The use of electronic data capture (EDC) methods for neuroimaging greatly simplifies the task of data collection and has the potential to help standardize many aspects of data sharing. We review here the motivations for sharing neuroimaging data, the current data sharing landscape, and the sociological or technical barriers that still need to be addressed. The INCF Task Force on Neuroimaging Datasharing, in conjunction with several collaborative groups around the world, has started work on several tools to ease and eventually automate the practice of data sharing. It is hoped that such tools will allow researchers to easily share raw, processed, and derived neuroimaging data, with appropriate metadata and provenance records, and will improve the reproducibility of neuroimaging studies. By providing seamless integration of data sharing and analysis tools within a commodity research environment, the Task Force seeks to identify and minimize barriers to data sharing in the field of neuroimaging.


Harvard Review of Psychiatry | 2005

Magnetic Resonance Imaging Studies in Early-Onset Bipolar Disorder: A Critical Review

Jean A. Frazier; Mary S. Ahn; Sandra M. DeJong; Eileen K. Bent; Janis L. Breeze; Anthony J. Giuliano

Background: Neuroimaging studies of early‐onset bipolar disorder (BD) are important in order to establish a fuller understanding of the underlying pathophysiology of the illness. The advantages of studying BD in children and adolescents include the relative absence of some confounds present in adult‐onset research, such as lengthy duration of illness and exposure to treatments, greater number of mood episodes, and the presence of substance abuse or dependence. Finally, studying youths with the disorder may enhance our knowledge about the neural mechanisms of affective dysregulation and may specifically elucidate whether there are abnormalities that are unique to the early‐onset form of the illness. Methods: PubMed was used to identify peer‐reviewed publications from the past 15 years (January 1990 to January 2005) that used brain‐imaging techniques (anatomic, functional, and biochemical) to research early‐onset BD. Results: Eleven studies using anatomic magnetic resonance imaging (MRI), seven using magnetic resonance spectroscopy (MRS), and two using functional MRI (fMRI) were identified. Structural abnormalities were reported in total cerebral, white matter, superior temporal gyrus, putamen, thalamus, amygdala, and hippocampal volumes. Deficits in cortical gray matter were also reported. Using MRS, abnormalities were reported in the dorsolateral prefrontal cortex, anterior cingulate, and basal ganglia. One fMRI study found increased activation in the putamen and thalamus of BD youths compared to controls, and a second found abnormal prefrontal‐subcortical activation in familial pediatric BD. Conclusion: Published MRI studies of early‐onset BD are few. Nonetheless, extant data implicate abnormalities in brain regions thought to regulate mood and cognition. Synthesis of the findings into an overall model of anatomic and functional disruption is difficult due to the methodological variations among studies and the limitations of individual studies, such as the use of small sample sizes, the heterogeneity of sample characteristics, and the wide range of brain structures selected for analysis. Recommendations are offered to guide future research. It will be important for future studies to reproduce prior findings and determine which findings are unique to early‐onset BD, relative to adult‐onset illness. In addition, studies will need to establish the extent to which early‐onset BD may overlap with comorbid disruptive, mood, anxiety, or psychotic disorders. (HARV REV PSYCHIATRY 2005;13:125–140.)


Journal of Child and Adolescent Psychopharmacology | 2009

Subcortical differences among youths with attention-deficit/hyperactivity disorder compared to those with bipolar disorder with and without attention-deficit/hyperactivity disorder

Melissa P. Lopez-Larson; Michael E; Janine E. Terry; Janis L. Breeze; Steven M. Hodge; Lena Tang; David N. Kennedy; Constance M. Moore; Nikos Makris; Verne S. Caviness; Jean A. Frazier

INTRODUCTION A significant number of children with bipolar disorder (BP) have co-morbid attention-deficit/hyperactivity disorder (ADHD). It is unknown if these children have neuroimaging findings unique to their co-morbid presentation, or if their brain findings are similar to children diagnosed with BP alone. METHOD Fifty three children with Diagnostic and Statistical Manual of Mental Disorders, 4(th) edition (DSM-IV) BP (23 with ADHD, 30 without), 29 healthy controls (HC), and 23 children with ADHD, similar in sex and age, had magnetic resonance imaging (MRI) scans on a 1.5T GE scanner. Volumetric assessments were performed for basal ganglia and limbic subcortical structures. RESULTS Youths with ADHD had smaller caudate and putamen volumes compared to both BP groups and they had moderately smaller total amygdala volumes compared to the other three groups. Youths with BP + ADHD had moderately larger nucleus accumbens volumes than HC, and females in both BP groups had smaller hippocampal volumes compared to ADHD and HC. No differences were found between the BP and BP + ADHD groups. CONCLUSION These data suggest that morphometric subcortical volumes in youths with BP + ADHD are more similar to those in youths with BP. They do not share subcortical neuroanatomic correlates with the ADHD group. These findings suggest that BP + ADHD is a subtype of pediatric BP rather than severe ADHD.


Journal of Child and Adolescent Psychopharmacology | 2009

Metformin for Weight Control in Pediatric Patients on Atypical Antipsychotic Medication

Lauren Shin; Hallie Bregman; Janis L. Breeze; Nancy Noyes; Jean A. Frazier

OBJECTIVE Metformin was assessed as an interventional medication for weight gain in children and adolescents taking atypical antipsychotic agents. METHOD A 12-week open-label trial was conducted to evaluate metformins effectiveness and safety for weight management. Eleven subjects, ages 10-18 years, participated in the study. Each subject received metformin orally up to 2000 mg/day. Primary outcome measures included weight, body mass index (BMI), and waist circumference. Secondary outcome measures included serum glucose, insulin, and fasting lipid profile. Changes in weight, BMI, waist, and metabolic profile were obtained by using repeated measures of covariance. RESULTS The mean reduction in weight, waist, BMI, serum glucose, and serum insulin was not statistically significant. However, 5 out of 11 patients lost weight (mean, -2.82 kg +/- 7.25), and overall the sample did not continue to gain weight. There was a significant decrease in triglyceride levels. Metformin was fairly well tolerated. CONCLUSION Preliminary data suggests that metformin may safely and effectively improve the triglyceride profile. However, contrary to study hypotheses, weight, waist, and BMI reduction were not statistically significant. Future double-blind studies with larger sample sizes and of longer duration are warranted to assess more fully the safety and efficacy of this intervention.


Biological Psychiatry | 1999

Effects of myo-Inositol ingestion on human brain myo-inositol levels: a proton magnetic resonance spectroscopic imaging study

Constance M. Moore; Janis L. Breeze; Thellea J. Kukes; Stephanie L. Rose; Stephen R. Dager; Bruce M. Cohen; Perry F. Renshaw

BACKGROUND Cerebrospinal fluid levels of myo-Inositol (m-Ino) are reported to be decreased in patients with affective disorder, and dietary supplements of m-Ino have been shown to reduce the symptoms of major depression. Myo-Inositol transport across the blood-brain barrier is mediated by a low capacity, saturable system. This study tests whether dietary m-Ino increases brain m-Ino or changes brain metabolism of m-Ino, possibly explaining the ability of this compound to alter mood. METHODS Using proton magnetic resonance spectroscopic imaging, we measured m-Ino levels in occipital gray and parietal white matter of seventeen healthy subjects. Magnetic resonance spectroscopic imaging was performed twice at baseline as well as at day 4 and day 8 while subjects ingested 6 g of m-Ino twice a day. RESULTS Following 4 days of m-Ino, m-Ino/Cr was 20% higher than baseline levels in occipital gray matter (p < 0.04) and 8% higher in parietal white matter (p = ns). By day 8, m-Ino/Cr ratios had returned to baseline values. CONCLUSIONS Brain m-Ino levels initially increase during m-Ino administration and subsequently return to baseline levels. The time-limited increases observed for brain m-Ino may reflect homeostatic mechanisms, possibly associated with the role of m-Ino as a cerebral osmolyte, or with changes in brain phosphoinositide metabolism.


Academic Medicine | 2016

Inequities in Academic Compensation by Gender: A Follow-up to the National Faculty Survey Cohort Study

Karen M. Freund; Anita Raj; Samantha E. Kaplan; Norma Terrin; Janis L. Breeze; Tracy H. Urech; Phyllis L. Carr

Purpose Cross-sectional studies have demonstrated gender differences in salaries within academic medicine. No research has assessed longitudinal compensation patterns. This study sought to assess longitudinal patterns by gender in compensation, and to understand factors associated with these differences in a longitudinal cohort. Method A 17-year longitudinal follow-up of the National Faculty Survey was conducted with a random sample of faculty from 24 U.S. medical schools. Participants employed full-time at initial and follow-up time periods completed the survey. Annual pretax compensation during academic year 2012–2013 was compared by gender. Covariates assessed included race/ethnicity; years since first academic appointment; retention in academic career; academic rank; departmental affiliation; percent effort distribution across clinical, teaching, administrative, and research duties; marital and parental status; and any leave or part-time status in the years between surveys. Results In unadjusted analyses, women earned a mean of


Applied Neuropsychology | 2004

Cognitive Impairment Associated With Toxigenic Fungal Exposure: A Replication and Extension of Previous Findings

Wayne A. Gordon; Joshua Cantor; Eckardt Johanning; Heather J. Charatz; Teresa Ashman; Janis L. Breeze; Lisa Haddad; Steven Abramowitz

20,520 less than men (P = .03); women made 90 cents for every dollar earned by their male counterparts. This difference was reduced to


British Journal of Oral & Maxillofacial Surgery | 2010

Maxillofacial injuries in military personnel treated at the Royal Centre for Defence Medicine June 2001 to December 2007

Janis L. Breeze; A.J. Gibbons; N.J. Opie; Andrew Monaghan

16,982 (P = .04) after adjusting for covariates. The mean difference of


Brain Imaging and Behavior | 2010

Age-related changes in the corpus callosum in early-onset bipolar disorder assessed using volumetric and cross-sectional measurements

Melissa P. Lopez-Larson; Janis L. Breeze; David N. Kennedy; Steven M. Hodge; Lena Tang; Constance M. Moore; Anthony J. Giuliano; Nikos Makris; Verne S. Caviness; Jean A. Frazier

15,159 was no longer significant (P = .06) when adjusting covariates and for those who had ever taken a leave or worked part-time. Conclusions The continued gender gap in compensation cannot be accounted for by metrics used to calculate salary. Institutional actions to address these disparities include both initial appointment and annual salary equity reviews, training of senior faculty and administrators to understand implicit bias, and training of women faculty in negotiating skills.


British Journal of Oral & Maxillofacial Surgery | 2011

Face, neck, and eye protection: adapting body armour to counter the changing patterns of injuries on the battlefield

Janis L. Breeze; I. Horsfall; A. Hepper; Jon C. Clasper

In this study, neuropsychological data and symptom reports from 31 individuals exposed to toxic mold were examined. Most participants were found to have reduced cognitive functioning in multiple domains, with memory and executive functions the most commonly affected areas. Rates of dysfunction were significantly greater than chance on more than half of the tests. Number of cognitive impairments was found to be related to depression, although few neuropsychological test scores were correlated with depression. Results also indicated that symptom report of the mold-exposed participants was not significantly different from that of matched groups of 65 persons with mild traumatic brain injury (TBI) and 26 individuals with moderate TBI. The mold-exposed participants reported significantly more symptoms than 47 people with no disability. This study adds to a growing body of literature (e.g., Baldo, Ahmad, & Ruff, 2002; Gordon, Johanning, & Haddad, 1999) relating exposure to mycotoxins to cognitive dysfunction.

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Jean A. Frazier

University of Massachusetts Medical School

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David N. Kennedy

University of Massachusetts Medical School

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Constance M. Moore

University of Massachusetts Medical School

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