Jason T. May

Urban streams across the USA: lessons learned from studies in 9 metropolitan areas

Abstract Studies of the effects of urbanization on stream ecosystems have usually focused on single metropolitan areas. Synthesis of the results of such studies have been useful in developing general conceptual models of the effects of urbanization, but the strength of such generalizations is enhanced by applying consistent study designs and methods to multiple metropolitan areas across large geographic scales. We summarized the results from studies of the effects of urbanization on stream ecosystems in 9 metropolitan areas across the US (Boston, Massachusetts; Raleigh, North Carolina; Atlanta, Georgia; Birmingham, Alabama; Milwaukee-Green Bay, Wisconsin; Denver, Colorado; Dallas-Fort Worth, Texas; Salt Lake City, Utah; and Portland, Oregon). These studies were conducted as part of the US Geological Surveys National Water-Quality Assessment Program and were based on a common study design and used standard sample-collection and processing methods to facilitate comparisons among study areas. All studies included evaluations of hydrology, physical habitat, water quality, and biota (algae, macroinvertebrates, fish). Four major conclusions emerged from the studies. First, responses of hydrologic, physical-habitat, water-quality, and biotic variables to urbanization varied among metropolitan areas, except that insecticide inputs consistently increased with urbanization. Second, prior land use, primarily forest and agriculture, appeared to be the most important determinant of the response of biota to urbanization in the areas we studied. Third, little evidence was found for resistance to the effects of urbanization by macroinvertebrate assemblages, even at low levels of urbanization. Fourth, benthic macroinvertebrates have important advantages for assessing the effects of urbanization on stream ecosystems relative to algae and fishes. Overall, our results demonstrate regional differences in the effects of urbanization on stream biota and suggest additional studies to elucidate the causes of these underlying differences.

Responses of benthic macroinvertebrates to environmental changes associated with urbanization in nine metropolitan areas

Responses of benthic macroinvertebrates along gradients of urban intensity were investigated in nine metropolitan areas across the United States. Invertebrate assemblages in metropolitan areas where forests or shrublands were being converted to urban land were strongly related to urban intensity. In metropolitan areas where agriculture and grazing lands were being converted to urban land, invertebrate assemblages showed much weaker or nonsignificant relations with urban intensity because sites with low urban intensity were already degraded by agriculture. Ordination scores, the number of EPT taxa, and the mean pollution-tolerance value of organisms at a site were the best indicators of changes in assemblage condition. Diversity indices, functional groups, behavior, and dominance metrics were not good indicators of urbanization. Richness metrics were better indicators of urban effects than were abundance metrics, and qualitative samples collected from multiple habitats gave similar results to those of single habitat quantitative samples (riffles or woody snags) in all metropolitan areas. Changes in urban intensity were strongly correlated with a set of landscape variables that was consistent across all metropolitan areas. In contrast, the instream environmental variables that were strongly correlated with urbanization and invertebrate responses varied among metropolitan areas. The natural environmental setting determined the biological, chemical, and physical instream conditions upon which urbanization acts and dictated the differences in responses to urbanization among metropolitan areas. Threshold analysis showed little evidence for an initial period of resistance to urbanization. Instead, assemblages were degraded at very low levels of urbanization, and response rates were either similar across the gradient or higher at low levels of urbanization. Levels of impervious cover that have been suggested as protective of streams (5-10%) were associated with significant assemblage degradation and were not protective.

Relation of urbanization to stream fish assemblages and species traits in nine metropolitan areas of the United States

We examined associations of fish assemblages and fish traits with urbanization and selected environmental variables in nine major United States metropolitan areas. The strongest relations between fishes and urbanization occurred in the metropolitan areas of Atlanta, Georgia; Birmingham, Alabama; Boston, Massachusetts; and Portland, Oregon. In these areas, environmental variables with strong associations (rs ≥ 0.70) with fish assemblages and fish traits tended to have strong associations with urbanization. Relations of urbanization with fish assemblages and fish traits were weaker in Denver, Colorado; Dallas-Fort Worth, Texas; Milwaukee-Green Bay, Wisconsin; and Raleigh, North Carolina. Environmental variables associated with fishes varied among the metropolitan areas. The metropolitan areas with poor relations may have had a limited range of possible response because of previous landscape disturbances. Given the complexities of urban landscapes in different metropolitan areas, our results indicate that caution is warranted when generalizing about biological responses to urbanization.

Stream macroinvertebrate response models for bioassessment metrics: addressing the issue of spatial scale

We developed independent predictive disturbance models for a full regional data set and four individual ecoregions (Full Region vs. Individual Ecoregion models) to evaluate effects of spatial scale on the assessment of human landscape modification, on predicted response of stream biota, and the effect of other possible confounding factors, such as watershed size and elevation, on model performance. We selected macroinvertebrate sampling sites for model development (n = 591) and validation (n = 467) that met strict screening criteria from four proximal ecoregions in the northeastern U.S.: North Central Appalachians, Ridge and Valley, Northeastern Highlands, and Northern Piedmont. Models were developed using boosted regression tree (BRT) techniques for four macroinvertebrate metrics; results were compared among ecoregions and metrics. Comparing within a region but across the four macroinvertebrate metrics, the average richness of tolerant taxa (RichTOL) had the highest R2 for BRT models. Across the four metrics, final BRT models had between four and seven explanatory variables and always included a variable related to urbanization (e.g., population density, percent urban, or percent manmade channels), and either a measure of hydrologic runoff (e.g., minimum April, average December, or maximum monthly runoff) and(or) a natural landscape factor (e.g., riparian slope, precipitation, and elevation), or a measure of riparian disturbance. Contrary to our expectations, Full Region models explained nearly as much variance in the macroinvertebrate data as Individual Ecoregion models, and taking into account watershed size or elevation did not appear to improve model performance. As a result, it may be advantageous for bioassessment programs to develop large regional models as a preliminary assessment of overall disturbance conditions as long as the range in natural landscape variability is not excessive.

Coupled Downscaled Climate Models and Ecophysiological Metrics Forecast Habitat Compression for an Endangered Estuarine Fish

Climate change is driving rapid changes in environmental conditions and affecting population and species’ persistence across spatial and temporal scales. Integrating climate change assessments into biological resource management, such as conserving endangered species, is a substantial challenge, partly due to a mismatch between global climate forecasts and local or regional conservation planning. Here, we demonstrate how outputs of global climate change models can be downscaled to the watershed scale, and then coupled with ecophysiological metrics to assess climate change effects on organisms of conservation concern. We employed models to estimate future water temperatures (2010–2099) under several climate change scenarios within the large heterogeneous San Francisco Estuary. We then assessed the warming effects on the endangered, endemic Delta Smelt, Hypomesus transpacificus, by integrating localized projected water temperatures with thermal sensitivity metrics (tolerance, spawning and maturation windows, and sublethal stress thresholds) across life stages. Lethal temperatures occurred under several scenarios, but sublethal effects resulting from chronic stressful temperatures were more common across the estuary (median >60 days above threshold for >50% locations by the end of the century). Behavioral avoidance of such stressful temperatures would make a large portion of the potential range of Delta Smelt unavailable during the summer and fall. Since Delta Smelt are not likely to migrate to other estuaries, these changes are likely to result in substantial habitat compression. Additionally, the Delta Smelt maturation window was shortened by 18–85 days, revealing cumulative effects of stressful summer and fall temperatures with early initiation of spring spawning that may negatively impact fitness. Our findings highlight the value of integrating sublethal thresholds, life history, and in situ thermal heterogeneity into global change impact assessments. As downscaled climate models are becoming widely available, we conclude that similar assessments at management-relevant scales will improve the scientific basis for resource management decisions.

Evaluating the adequacy of a reference-site pool for ecological assessments in environmentally complex regions

Many advances in the field of bioassessment have focused on approaches for objectively selecting the pool of reference sites used to establish expectations for healthy waterbodies, but little emphasis has been placed on ways to evaluate the suitability of the reference-site pool for its intended applications (e.g., compliance assessment vs ambient monitoring). These evaluations are critical because an inadequately evaluated reference pool may bias assessments in some settings. We present an approach for evaluating the adequacy of a reference-site pool for supporting biotic-index development in environmentally heterogeneous and pervasively altered regions. We followed common approaches for selecting sites with low levels of anthropogenic stress to screen 1985 candidate stream reaches to create a pool of 590 reference sites for assessing the biological integrity of streams in California, USA. We assessed the resulting pool of reference sites against 2 performance criteria. First, we evaluated how well the reference-site pool represented the range of natural gradients present in the entire population of streams as estimated by sites sampled through probabilistic surveys. Second, we evaluated the degree to which we were successful in rejecting sites influenced by anthropogenic stress by comparing biological metric scores at reference sites with the most vs fewest potential sources of stress. Using this approach, we established a reference-site pool with low levels of human-associated stress and broad coverage of environmental heterogeneity. This approach should be widely applicable and customizable to particular regional or programmatic needs.

Species composition and habitat associations of benthic algal assemblages in headwater streams of the Sierra Nevada, California

Abstract Despite their trophic importance and potential importance as bioindicators of stream condition, benthic algae have not been well studied in California. In particular there are few studies from small streams in the Sierra Nevada. The objective of this study was to determine the standing crop of chlorophyll-a and benthic algal species assemblages present in the small 1st- and 2nd-order streams of the Kings River Experimental Watersheds (KREW, watersheds of Bull, Providence, Duff, and Teakettle Creeks) and determine the associations of these measures with stream habitat. We collected samples of benthic algae from rock substrata in September 2002 (7 sites) and 2005 (the same 7 sites plus 5 additional sites). Habitat and water-quality data were collected concurrently. Chlorophyll-a values ranged from 0.2 to 3.2 mg ·m−2. Chlorophyll-a in the Bull Creek watershed was generally lower than in the other watersheds. Benthic algal assemblages were dominated by diatoms and cyanobacteria. We collected 79 taxa of diatoms in 2002 and 126 taxa in 2005. Diatom taxa richness in individual samples ranged from 15 to 47. Nonmetric multidimensional scaling analysis of arcsine square-root transformed proportional abundances of diatoms identified 3 groups of sites. Bull Creek sites were generally different from other sites (group 1), and the sites from Bull Creek were different in 2002 (group 2) and 2005 (group 3). Five taxa appeared to be particularly important in distinguishing groups: Achnanthidium minutissimum, Cocconeis placentula, Eunotia incisa, Eunotia pectinalis var. minor, and Planothidium lanceolatum. Elevation, water temperature, pH, specific conductance, and canopy were habitat variables correlated with the differences in diatom assemblages among sites. Our results provide a valuable baseline for future studies of benthic algae in Sierra Nevada headwater streams and will be particularly important in understanding the effects of different forest restoration management strategies being tested in the KREW project.

Associations of benthic macroinvertebrate assemblages with environmental variables in the upper Clear Creek watershed, California

ABSTRACT. Benthic macroinvertebrates are integral components of stream ecosystems and are often used to assess the ecological integrity of streams. We sampled streams in the upper Clear Creek drainage in the Klamath—Siskiyou Ecoregion of northwestern California in fall 2004 (17 sites) and 2005 (original 17 plus 4 new sites) with the objectives of documenting the benthic macroinvertebrate assemblages supported by the streams in the area, determining how those assemblages respond to environmental variables, assessing the biological condition of the streams using a benthic index of biotic integrity (IBI), and understanding the assemblages in the context of biodiversity of the ecoregion. We collected both reach-wide (RW) and targeted-riffle (TR) macroinvertebrate samples at each site. The macroinvertebrate assemblages were diverse, with over 150 genera collected for each sampling protocol. The macroinvertebrate assemblages appeared to be most responsive to a general habitat gradient based on stream size, gradient, flow, and dominance of riffles. A second important habitat gradient was based on elevation and dominance of riffles. A gradient in water quality based on concentrations of dissolved ions and metals was also important. Models based on these 3 gradients had Spearmans rank correlations with macroinvertebrate taxonomic composition of 0.60 and 0.50 for the TR and RW samples, respectively. The majority (>50%) of the sites were in good or very good biological condition based on IBI scores. The diversity of macroinvertebrate assemblages is associated with the diversity of habitats available in the Klamath—Siskiyou Ecoregion. Maintaining the aquatic habitats in good condition is important in itself but is also vital to maintaining biodiversity in this diverse and unique ecoregion.

Aquatic vertebrate assemblages of the Upper Clear Creek Watershed, California

Abstract We sampled streams in the Upper Clear Creek Watershed in northwestern California in fall 2004 and fall 2005 to document assemblages of aquatic vertebrates and to provide resource managers with information on the importance of these assemblages in terms of regional biodiversity. We used single-pass backpack electrofishing to sample 15 sites in fall 2004 and the same 15 sites plus 4 new sites in fall 2005. We captured 10 fish taxa and 2 species of larval amphibians. Seven of the fish taxa were native species. Of the exotic species, only brook trout (Salvelinus fontinalis) occurred at more than 1 site. Ordinations by nonmetric multidimensional scaling indicated a gradient from sites with rainbow trout (Oncorhynchus mykiss), Pacific giant salamander (Dicamptodon tenebrosus), and tailed frog (Ascaphus truei) to sites dominated by riffle sculpin (Cottus gulosus), California roach (Hesperoleucas symmetricus), and Sacramento sucker (Catostomus occidentalis). The gradient in species composition was associated with changes in elevation, gradient, discharge, and substrate. The Upper Clear Creek Watershed represents a unique area of overlap between the North Coast California amphibian fauna and the Central Valley fish fauna with a notable paucity of exotic fishes and amphibians. Preservation of the integrity of native aquatic assemblages is an important goal for aquatic resource management in the region; our results provide a critcial baseline to gauge future management actions.