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Dive into the research topics where Jayanti Pande is active.

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Featured researches published by Jayanti Pande.


Journal of Molecular Biology | 2003

High-resolution X-ray Crystal Structures of Human γD Crystallin (1.25 Å) and the R58H Mutant (1.15 Å) Associated with Aculeiform Cataract

Ajit K. Basak; Orval A. Bateman; Christine Slingsby; Ajay Pande; Neer Asherie; Olutayo Ogun; George B. Benedek; Jayanti Pande

Several human cataracts have been linked to mutations in the gamma crystallin gene. One of these is the aculeiform cataract, which is caused by an R58H mutation in gammaD crystallin. We have shown previously that this cataract is caused by crystallization of the mutant protein, which is an order of magnitude less soluble than the wild-type. Here, we report the very high-resolution crystal structures of the mutant and wild-type proteins. Both proteins crystallize in the same space group and lattice. Thus, a strict comparison of the protein-protein and protein-water intermolecular interactions in the two crystal lattices is possible. Overall, the differences between the mutant and wild-type structures are small. At position 58, the mutant protein loses the direct ion-pair intermolecular interaction present in the wild-type, due to the differences between histidine and arginine at the atomic level; the interaction in the mutant is mediated by water molecules. Away from the mutation site, the mutant and wild-type lattice structures differ in the identity of side-chains that occupy alternate conformations. Since the interactions in the crystal phase are very similar for the two proteins, we conclude that the reduction in the solubility of the mutant is mainly due to the effect of the R58H mutation in the solution phase. The results presented here are also important as they are the first high-resolution X-ray structures of human gamma crystallins.


Progress in Retinal and Eye Research | 1999

THEORETICAL AND EXPERIMENTAL BASIS FOR THE INHIBITION OF CATARACT

George B. Benedek; Jayanti Pande; George M. Thurston; John I. Clark

Aggregation of the lens proteins to form high molecular weight clusters is a major contributing factor in age-onset nuclear cataract [Benedek, G. B. (1971) Theory of transparency of the eye. Appl. Optics, 10, 459-473]. This aggregation occurs continually throughout life and contributes to an exponential increase, as a function of age, in the intensity of the light backscattered out of the lens. The time constant deltaT for this exponential increase in human populations is a valuable index, helpful for conducting clinical trials. In-vitro studies have identified reagents capable of inhibiting high molecular weight aggregate formation, as well as the non-covalent interprotein interactions responsible for phase separation. These reagents are also found experimentally to be effective cataract inhibitors in animal model systems in vivo. We believe that the stage is now set for human clinical trials of putative cataract inhibitors. We present rough quantitative estimates of the trial parameters needed to assure an unambiguous determination of efficacy in a trial population. Such a trial simply requires a measurement of the time constant deltaT in the treated population relative to the untreated population. A successful outcome of the trial is indicated if deltaT increases by 20% over that found for the untreated population. Our estimates suggest efficacy could be determined in a two year trial involving about 300 subjects in the treated group.


Biophysical Chemistry | 1998

OLIGOMERIZATION AND PHASE SEPARATION IN GLOBULAR PROTEIN SOLUTIONS

Neer Asherie; Jayanti Pande; Aleksey Lomakin; Olutayo Ogun; Stacy R.A. Hanson; Jean B. Smith; George B. Benedek

We have chemically crosslinked a globular protein, gamma IIIb-crystallin, to produce a system of well-defined oligomers: monomers, dimers, trimers and a mixture of higher n-mers. Gel electrophoresis, size exclusion chromatography, quasielastic light scattering spectroscopy, and electrospray ionization mass spectrometry were used to characterize the oligomers formed. The liquid-liquid phase separation boundaries of the various oligomers were measured. We find that at a given concentration the phase separation temperature strongly increases with the molecular weight of the oligomers. This phase behavior is very similar to previous findings for gamma II-crystallin, for which oxidation-induced oligomerization is accompanied by an increase in the phase separation temperature. These findings imply that for phase separation, the detailed changes of the surface properties of the proteins are less important than the purely steric effects of oligomerization.


Current Eye Research | 1996

Pantethine inhibits the formation of high-Tc protein aggregates in gamma B crystallin solutions.

Gregory Friberg; Jayanti Pande; Olutayo Ogun; George B. Benedek

PURPOSE Solutions of the bovine lens protein gamma B (or gamma II) crystallin at neutral pH in the absence of reducing agents, undergo a slow, partial conversion to a new protein species, gamma IIH. This species is an aggregate composed of an intermolecular, disulfide-crosslinked dimer (approximately equal to 32% of total protein by weight) and loosely associated dimers (approximately equal to 66%). gamma IIH has a phase separation temperature (Tph), at least 40 degrees C higher than that of native gamma II crystallin at any given protein concentration. In this paper we demonstrate that pantethine, a derivative of coenzyme A, inhibits the formation of gamma IIH. METHODS gamma II crystallin solutions were incubated at pH 7.1 and room temperature with increasing amounts of pantethine. The Tph of the solutions was monitored as a function of incubation time. Corresponding to each Tph measurement, aliquots of each solution were analyzed by cation-exchange HPLC to determine the amount of gamma IIH formed. RESULTS Incubation of gamma II crystallin with increasing amounts of pantethine lowers Tph and suppresses the formation of gamma IIH. With pantethine to protein mole ratios of 0.66, 1 and 2, the Tph of gamma II crystallin is lowered from 8 degrees C in the native protein, to 2 degrees C, -3 degrees C respectively, at a protein concentration of approximately equal to 200 mg/ml. The amount of gamma IIH accumulated decreases from approximately 25% in the native protein to 10%, 1% and 0% respectively in these pantethine-treated protein solutions. For complete suppression of the rise in Tph and inhibition of gamma IIH formation, a 2:1 mole ratio of pantethine to protein is required. CONCLUSIONS We suggest that pantethine reacts with two cysteine residues of gamma IIH crystallin by forming a mixed disulfide, and effectively suppress protein aggregation and lowers Tph. This is due to the strong polar character of pantethine which reduces the net attractive interactions between the protein molecules.


Proceedings of the National Academy of Sciences of the United States of America | 1991

Binary-liquid phase separation of lens protein solutions

M L Broide; C R Berland; Jayanti Pande; Olutayo Ogun; George B. Benedek


Proceedings of the National Academy of Sciences of the United States of America | 1992

Solid-liquid phase boundaries of lens protein solutions

C R Berland; George M. Thurston; M Kondo; M L Broide; Jayanti Pande; Olutayo Ogun; George B. Benedek


Journal of Molecular Biology | 2001

Enhanced crystallization of the Cys18 to Ser mutant of bovine gammaB crystallin.

Neer Asherie; Jayanti Pande; Ajay Pande; Jennifer A. Zarutskie; Joseph Lomakin; Aleksey Lomakin; Olutayo Ogun; Lawrence J. Stern; Jonathan King; George B. Benedek


Proceedings of the National Academy of Sciences of the United States of America | 1991

Suppression of phase separation in solutions of bovine gamma IV-crystallin by polar modification of the sulfur-containing amino acids

Jayanti Pande; C R Berland; M L Broide; Olutayo Ogun; J Melhuish; George B. Benedek


Experimental Eye Research | 1993

Suppression of Phase Separation in Bovine γIV Crystallin Solutions: Effect of Modification by Charged Versus Uncharged Polar Groups

Jayanti Pande; Olutayo Ogun; Cheryl Nath; George B. Benedek


Archive | 2016

(r-crystallin/solubility/crystallization/phase transition)

Carolyn R. Berland; George M. Thurston; L Michael; Jayanti Pande; Olutayo Ogun; George B. Benedek

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George B. Benedek

Massachusetts Institute of Technology

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Olutayo Ogun

Massachusetts Institute of Technology

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Neer Asherie

Massachusetts Institute of Technology

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C R Berland

Massachusetts Institute of Technology

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M L Broide

Massachusetts Institute of Technology

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Aleksey Lomakin

Massachusetts Institute of Technology

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