Jeffery R. Cordell

Ecological assessment criteria for restoring anadromous salmonid habitat in Pacific Northwest estuaries

Restoration of estuarine habitats is essential for the conservation and recovery of depressed Pacific salmon populations. However, assessing the functions of recently restored habitat poses a number of problems because of the transitory occurrence of salmonids in any one location. We propose assessment criteria and metrics that are based on the habitat’s capacity, opportunity, and realized function to enhance survivability of juvenile salmon. Because of the paucity of data relating capacity and opportunity attributes to realized function (e.g. growth, consumption rate, survival), there continues to be a need for manipulative experiments to assess the developmental status of restoration sites. Such a self-monitoring approach of letting the fish diagnose the ecological state of restoration would effectively address the small-scale, site-specific assessment goals and criteria, but ignores the larger-scale issues relating to the ability of diverse salmon species and life histories to occupy estuarine habitat landscapes. If coastal restoration is going to contribute the recovery of anadromous salmonid populations, a landscape perspective is fundamental to restoration planning, implementation, and particularly assessment.

The effects of introduced water hyacinth on habitat structure, invertebrate assemblages, and fish diets

The South American floating aquatic plant water hyacinth (Eichhornia crassipes) has a history of worldwide invasions, including a 1904 introduction into the Sacramento-San Joaquin Delta, California. The native pennywort (Hydrocotyle umbellata) occupies similar habitats in the Delta and is extensively used by resident invertebrates and fish. We sought to discover if an invader would be functionally equivalent to the native plant, by asking whether the encroadhing hyacinth modified the invertebrate assemblage structure and fish-invertebrate food web relative to pennywort. We sampled epiphytic, epibenthic, and benthic invertebrates, and plant canopy insects in patches of hyacinth and pennywort, and analyzed fish diets at three sites in the Delta during 1998. We also measured habitat structure (leaf density, root biomass, and surface area). In 1999, following control and absence of hyacinth, we again measured epiphytic invertebrates in pennywort. We found differences between hyacinth and pennywort in structure, associated invertebrates, and fish diets. Most measurements inferred functional non-equivalency between hyacinth and pennywort, although some functional equivalency and natural variation existed. Leaf and insect densities were significantly higher in pennywort and there were also significant differences in insect assemblage compositions. Hyacinth roots in the water column had significantly more surface area. Densities of epibenthic and benthic aquatic invertebrates were typically greater in pennywort and taxonomic compositions of aquatic invertebrate assemblages showed significant differences. Amphipods and isopods living epiphytically in the root masses were particularly abundant, including several newly discovered introduced species: the amphipodCrangonyx floridanus and the isopodsCaecidotea racovitai andAsellus hilgendorfii. The native amphipodHyalella azteca was more abundant in pennywort and heavily preyed upon by fish, while the non-indigenousC. floridanus was more abundant in hyacinth and not prevalent in fish diets. The introduction of hyacinth to the Delta has caused significant ecological alterations in the surrounding community, due to hyacinth being functionally different from native patches of pennywort.

Fish Distribution, Abundance, and Behavior along City Shoreline Types in Puget Sound

Abstract Shoreline modifications, such as bulkheads, riprap, and overwater structures, have altered many of the natural habitats in nearshore urbanized areas surrounding coastal cities, including those in Puget Sound, Washington. The effects of such structures on ecological processes are poorly known, especially those impacting juvenile salmonids Oncorhynchus spp. The goal of our study was to compare the relative abundance and behavior of juvenile salmonids and other fishes along various modified and undeveloped shoreline types. We used enclosure nets and snorkel surveys to sample fishes during high tides in areas adjacent to shore at five main habitat types: cobble beach, sand beach, riprap extending into the upper intertidal zone, deep riprap extending into the subtidal zone, and the edge of overwater structures. Bottom-dwelling fishes exhibited the only significant differences in density among cobble beach, sand beach, and riprap that extended into the upper intertidal zone. This suggests that substrat...

Zooplankton invasions: a brief review, plus two case studies from the northeast Pacific Ocean

Invasions of aquatic habitats by non-indigenous species (NIS), including zooplankton, are occurring at an alarming rate and are causing global concern. Although hundreds of such invasions have now been documented, surprisingly little is known about the basic biology and ecology of these invaders in their new habitats. Here we provide an overview of the published literature on NIS zooplankton, separated by life history (holoplankton vs. meroplankton), habitat (marine, estuarine, freshwater), and biological level of organization or topic (e.g. distribution and range extension, physiology, behavior, feeding, community impacts, ecosystem dynamics, etc). Amongst the many findings generated by our literature search, perhaps the most striking is the paucity of studies on community and ecosystem level impacts of NIS zooplankton, especially in marine and estuarine systems. We also present some results from two ongoing studies of invasive zooplankton in the northeast Pacific Ocean – Pseudodiaptomus inopinus in Washington and Oregon coastal estuaries, and Tortanus dextrilobatus in San Francisco Bay. Both of these Asian copepods have recently expanded their range and can at times be extremely abundant (103 m−3). We also examine some aspects of the trophic (predator–prey) ecology of these two invasive copepods, and find that they are likely to be important in the flow of material and energy in the systems in which they now pervade, although their impacts at the ecosystem level remain to be quantified. Finally, the findings of both our literature search and our two case studies of invasive zooplankton lead us to make several recommendations for future research.

Distribution of the invasive New Zealand mudsnail ( Potamopyrgus antipodarum ) in the Columbia River Estuary and its first recorded occurrence in the diet of juvenile Chinook salmon ( Oncorhynchus tshawytscha )

Estuaries play an important role as nurseries and migration corridors for Chinook salmon and other fishes. The invasive New Zealand mudsnail, Potamopyrgus antipodarum (Gray, 1843), has been noted in the Columbia River Estuary and other estuaries in the western USA, yet no studies have addressed the estuarine impacts of this invader. Our data show P. antipodarum is currently found in five peripheral bays and many tributaries of the Columbia River Estuary, where it can constitute a major portion of the benthic invertebrate biomass and where it co-occurs with native amphipod species. We review the history of the P. antipodarum invasion in the Columbia River Estuary and discuss potential impacts on estuarine food webs. We also report the first occurrence of P. antipodarum in the diet of juvenile Chinook salmon from the Columbia River Estuary. Although present in Chinook diets at very low frequencies, our observations of P. antipodarum in Chinook gut contents may represent early stages of food web change due to the establishment of dense estuarine snail populations. Additional research is needed to determine the effects of P. antipodarum on benthic resources, native benthic invertebrates, and benthic predators. We encourage biologists working in western USA estuaries to be alert to the possibility of encountering P. antipodarum in benthic habitats and predator diets.

The Invasive Asian Copepod Pseudodiaptomus inopinus in Oregon, Washington, and British Columbia Estuaries

At least six species of Asian copepods have been recently introduced to the west coast of North America. Among them isPseudodiaptomus inopinus, which became established and abundant in the Columbia River estuary between 1980 and 1990. Subsequently, the tidal regions of 18 smaller rivers in the Pacific Northwest were sampled using near-bottom pumps and vertical plankton net hauls. These samples indicate thatP. inopinus has not only invaded at least seven other estuaries in this region, but that it is sometimes the dominant zooplankter in these systems.P. inopinus occurred in estuaries of both large and small rivers and in rivers with and without international shipping. Two factors may be important in the establishment of this copepod: temperature and extent of salinity intrusion. In our samples, average autumn temperature of rivers with establishedP. inopinus populations was 19.3°C, whereas those withoutP. inopinus had an average temperature of 12.4°C. Rivers withP. inopinus had salinity intrusion zones of more than 1 km length and those withoutP. inopinus usually had intrusion zones of less than 1 km.

Shoreline Armoring in an Estuary Constrains Wrack-Associated Invertebrate Communities

Beach wrack is an organic subsidy that supports high intertidal and supralittoral invertebrate communities in many coastal systems. Beaches fringed with riparian vegetation accumulate wrack from both terrestrial leaf litter and marine algae/seagrasses, forming a reciprocal connection. Previous research has shown that shoreline armoring disrupts this marine-terrestrial connection and alters the amount and composition of beach wrack. We sampled invertebrates associated with beach wrack at 29 paired armored and unarmored beaches in Puget Sound, WA and conducted wrack decomposition experiments. Armored beaches had significantly fewer invertebrates as well as different assemblages. Unarmored assemblages were characterized by talitrid amphipods and dipteran and coleopteran insects (flies and beetles), and were correlated with the amount of beach wrack and logs, the proportion of terrestrial material in the wrack, and the maximum elevation of the beach. Experiments showed that talitrid amphipods and oligochaete worms were positively correlated with wrack decomposition rates. The substantial reduction in high-shore invertebrates at armored beaches represents a decrease in subsidies to secondary consumers in both adjacent terrestrial and nearshore ecosystems. These armoring effects may thus cascade, via altered food webs, to organisms in other environments. Our sampling of multiple armored-unarmored beach pairs allowed us to control for variability of many environmental parameters, improving our ability to identify armoring-related differences, and greatly expanding the scale of inference of previous studies showing the negative effects of armoring on beach fauna.

Effects of Seawalls and Piers on Fish Assemblages and Juvenile Salmon Feeding Behavior

AbstractShoreline modifications, such as seawall armoring and piers, are ubiquitous along developed waterfronts worldwide, and recent research suggests that their ecological effects are primarily negative. We utilized snorkel surveys to quantify the effects of seawalls and piers on fish in nearshore habitats of an urbanized estuary in Puget Sound, Washington. We observed 17 species of fish and 4 species of crab during April–August 2012 at sites modified by seawalls and piers and at reference beach sites with minimal anthropogenic structures. Species assemblages at modified sites were significantly different from those at reference beaches. At modified sites, fish distribution and assemblage structure varied with proximity to the shade cast by piers; overall fish abundances were reduced under piers, and the greatest abundances were observed at high tides in areas directly adjacent to piers. Juvenile Pacific salmon Oncorhynchus spp. were the dominant fish species, and piers reduced their presence and feedin...

Ecological implications of invasive tunicates associated with artificial structures in Puget Sound, Washington, USA

The non-native tunicates Didemnum vexillum, Ciona savignyi, and Styela clava are of concern to resource managers of Puget Sound, Washington, USA because they have been shown to threaten native species diversity and shellfish aquaculture in other regions. Invasive tunicates in Puget Sound occur mainly on man-made structures such as floating docks and aquaculture facilities. We conducted studies of the three species of concern and a fourth introduced tunicate, Botrylloides violaceus, that occur on these structures to evaluate their effects on mussels and native invertebrate communities. Because most studies of community effects of tunicates have dealt with sessile fouling organisms, we focused instead on epibenthic organisms such as meiofaunal harpacticoid copepods and macrofaunal polychaetes and amphipods that are known to be important prey for juvenile salmon and other small fish. Similar studies have shown mixed results, with negative, positive, or no effects depending on the species. We also found few community-level effects. Abundances of several species were lower when tunicates were present, but only at some of the sites. Several other species, including a non-native isopod, were significantly more abundant in the presence of tunicates. However, in most cases results were not statistically significant and more intensive, controlled sampling or experiments may be needed to demonstrate any consistent tunicate effects. Although invasive tunicates cause problems for mussel growers elsewhere, we did not find negative effects on mussels at four sites in Puget Sound. Given the large impacts known to accompany tunicate invasions elsewhere and their relatively recent invasions into Puget Sound, monitoring of their populations and effects should continue in the region.

Concentrated sodium chloride brine solutions as an additional treatment for preventing the introduction of nonindigenous species in the ballast tanks of ships declaring no ballast on board

Currently, seawater flushing is the only management strategy for reducing the number of viable organisms in residual sediments and water of ballast tanks of vessels declaring no ballast on board (NOBOB) that traffic ports of the eastern United States. Previously, we identified several species of freshwater and brackish-water peracarid crustaceans able to survive the osmotic shock that occurs during open-ocean ballast water exchange and, potentially, to disperse over long distances via ballasted ships and NOBOB vessels. We tested the efficacy of concentrated sodium chloride brine solutions as an additional treatment for eradicating the halotolerant taxa often present in the ballast tanks of NOBOB ships. The lowest brine treatments (30 ppt for 1 h) caused 100% mortality in several species of cladocerans and copepods collected from oligohaline habitats. Several brackish-water peracarid crustaceans, however, including some that can survive in freshwater as well, required higher brine concentrations and longer exposure durations (45-60 ppt for 3-24 h). The most resilient animals were widely introduced peracarid crustaceans that generally prefer mesohaline habitats but do not tolerate freshwater (required brine treatments of 60-110 ppt for 3-24 h). Brine treatments (30 ppt) also required less time to cause 100% mortality for eight taxa compared with treatments using 34 ppt seawater. Based on these experiments and published data, we present treatment strategies for the ballast tank biota often associated with NOBOB vessels entering the Great Lakes region. We estimate the lethal dosage of brine for 95% of the species in our experiments to be 110 ppt (95% confidence interval, 85-192 ppt) when the exposure time is 1 h and 60 ppt (95% confidence interval, 48-98 ppt) when the exposure duration is 6 h or longer.