Jennifer J. Follstad Shah

Ecoenzymatic stoichiometry of microbial organic nutrient acquisition in soil and sediment

Biota can be described in terms of elemental composition, expressed as an atomic ratio of carbon:nitrogen:phosphorus (refs 1–3). The elemental stoichiometry of microoorganisms is fundamental for understanding the production dynamics and biogeochemical cycles of ecosystems because microbial biomass is the trophic base of detrital food webs. Here we show that heterotrophic microbial communities of diverse composition from terrestrial soils and freshwater sediments share a common functional stoichiometry in relation to organic nutrient acquisition. The activities of four enzymes that catalyse the hydrolysis of assimilable products from the principal environmental sources of C, N and P show similar scaling relationships over several orders of magnitude, with a mean ratio for C:N:P activities near 1:1:1 in all habitats. We suggest that these ecoenzymatic ratios reflect the equilibria between the elemental composition of microbial biomass and detrital organic matter and the efficiencies of microbial nutrient assimilation and growth. Because ecoenzymatic activities intersect the stoichiometric and metabolic theories of ecology, they provide a functional measure of the threshold at which control of community metabolism shifts from nutrient to energy flow.

Forecasting functional implications of global changes in riparian plant communities

Riparian ecosystems support mosaics of terrestrial and aquatic plant species that enhance regional biodiversity and provide important ecosystem services to humans. Species composition and the distribution of functional traits – traits that define species in terms of their ecological roles – within riparian plant communities are rapidly changing in response to various global change drivers. Here, we present a conceptual framework illustrating how changes in dependent wildlife communities and ecosystem processes can be predicted by examining shifts in riparian plant functional trait diversity and redundancy (overlap). Three widespread examples of altered riparian plant composition are: shifts in the dominance of deciduous and coniferous species; increases in drought-tolerant species; and the increasing global distribution of plantation and crop species. Changes in the diversity and distribution of critical plant functional traits influence terrestrial and aquatic food webs, organic matter production and pro...

Ecoenzymatic Stoichiometry in Relation to Productivity for Freshwater Biofilm and Plankton Communities

The degradation of detrital organic matter and assimilation of carbon (C), nitrogen (N), and phosphorus (P) by heterotrophic microbial communities is mediated by enzymes released into the environment (ecoenzymes). For the attached microbial communities of soils and freshwater sediments, the activities of β-glucosidase, β-N-acetylglucosaminidase, leucine aminopeptidase, and phosphatase show consistent stoichiometric patterns. To determine whether similar constraints apply to planktonic communities, we assembled data from nine studies that include measurements of these enzyme activities along with microbial productivity. By normalizing enzyme activity to productivity, we directly compared the ecoenzymatic stoichiometry of aquatic biofilm and bacterioplankton communities. The relationships between β-glucosidase and α-glucosidase and β-glucosidase and β-N-acetylglucosaminidase were statistically indistinguishable for the two community types, while the relationships between β-glucosidase and phosphatase and β-glucosidase and leucine aminopeptidase significantly differed. For β-glucosidase vs. phosphatase, the differences in slope (biofilm 0.65, plankton 1.05) corresponded with differences in the mean elemental C:P ratio of microbial biomass (60 and 106, respectively). For β-glucosidase vs. leucine aminopeptidase, differences in slope (0.80 and 1.02) did not correspond to differences in the mean elemental C:N of biomass (8.6 and 6.6). β-N-Acetylglucosaminidase activity in biofilms was significantly greater than that of plankton, suggesting that aminosaccharides were a relatively more important N source for biofilms, perhaps because fungi are more abundant. The slopes of β-glucosidase vs. (β-N-acetylglucosaminidase + leucine aminopeptidase) regressions (biofilm 1.07, plankton 0.94) corresponded more closely to the estimated difference in mean biomass C:N. Despite major differences in physical structure and trophic organization, biofilm and plankton communities have similar ecoenzymatic stoichiometry in relation to productivity and biomass composition. These relationships can be integrated into the stoichiometric and metabolic theories of ecology and used to analyze community metabolism in relation to resource constraints.

Integrating resource utilization and temperature in metabolic scaling of riverine bacterial production

The study of metabolic scaling in stream ecosystems is complicated by their openness to external resource inputs. For heterotrophic bacteria, which are a large component of stream metabolism, it may be possible to integrate the effects of resource availability and temperature on production using metabolic scaling theory and the kinetics of extracellular enzyme activity (EEA) associated with the degradation of major nutrient pools. With this goal, we analyzed previously published data on EEA and bacterial production for two rivers in northwestern Ohio, USA. The EEA data included estimates of apparent Vmax, a measure of catalytic capacity, and apparent Km, a measure of available substrate concentration, for six extracellular enzymes (alpha-glucosidase, beta-glucosidase, aminopeptidase, protease, phosphatase, and acetyl esterase). Sampling was done over an annual cycle with a temperature range of 4 31 degrees C, while EEA assays were conducted at 20 degrees C. The EEA kinetic measures were scaled to ambient stream temperature using an activation energy (Ea) of 0.5 eV (8.01 x 10(-20) J) and converted to estimates of the turnover rate (St) of their associated substrate pools. The St values associated with protein utilization, the largest substrate pool, had the strongest relationship to bacterial production (r2 = 0.49-0.52); those for carbohydrate utilization, the smallest substrate pool, had the weakest (r2= 0.09-0.15). Comparisons of apparent Ea over the annual cycle showed that the trophic basis of bacterial production switched from relatively high carbohydrate consumption in autumn and winter to relatively high protein consumption in spring and summer, corresponding to seasonal dynamics in plant litter inputs and algal production, respectively. Over the annual cycle, the summed substrate generation rate of the six enzymes was similar in magnitude and strongly correlated with bacterial production (r2 = 0.56). This approach combines effects of substrate pool size, catalytic capacity, and temperature on bacterial production and could be used to compare ecosystems along latitudinal gradients where resource, rather than temperature, effects on metabolic scaling are of greater magnitude.

Ecoenzymatic stoichiometry of stream sediments with comparison to terrestrial soils

The kinetics and elemental composition of cellular units that mediate production and respiration are the basis for the metabolic and stoichiometric theories of ecological organization. This theoretical framework extends to the activities of microbial enzymes released into the environment (ecoenzymes) that mediate the release of assimilable substrate from detrital organic matter. In this paper, we analyze the stoichiometry of ecoenzymatic activities in the surface sediments of lotic ecosystems and compare those results to the stoichiometry observed in terrestrial soils. We relate these ecoenzymatic ratios to energy and nutrient availability in the environment as well as microbial elemental content and growth efficiency. The data, collected by US Environmental Protection Agency, include the potential activities of 11 enzymes for 2,200 samples collected across the US, along with analyses of sediment C, N and P content. On average, ecoenzymatic activities in stream sediments are 2–5 times greater per gC than those of terrestrial soils. Ecoenzymatic ratios of C, N and P acquisition activities support elemental analyses showing that microbial metabolism is more likely to be C-limited than N or P-limited compared to terrestrial soils. Ratios of hydrolytic to oxidative activities indicate that sediment organic matter is more labile than soil organic matter and N acquisition is less dependent on humic oxidation. The mean activity ratios of glycosidases and aminopeptidases reflect the environmental abundance of their respective substrates. For both freshwater sediments and terrestrial soils, the mean C:nutrient ratio of microbial biomass normalized to growth efficiency approximates the mean ecoenzymatic C:nutrient activity ratios normalized to environmental C:nutrient abundance. This relationship defines a condition for biogeochemical equilibrium consistent with stoichiometric and metabolic theory.

Global synthesis of the temperature sensitivity of leaf litter breakdown in streams and rivers

Abstract Streams and rivers are important conduits of terrestrially derived carbon (C) to atmospheric and marine reservoirs. Leaf litter breakdown rates are expected to increase as water temperatures rise in response to climate change. The magnitude of increase in breakdown rates is uncertain, given differences in litter quality and microbial and detritivore community responses to temperature, factors that can influence the apparent temperature sensitivity of breakdown and the relative proportion of C lost to the atmosphere vs. stored or transported downstream. Here, we synthesized 1025 records of litter breakdown in streams and rivers to quantify its temperature sensitivity, as measured by the activation energy (Ea, in eV). Temperature sensitivity of litter breakdown varied among twelve plant genera for which Ea could be calculated. Higher values of Ea were correlated with lower‐quality litter, but these correlations were influenced by a single, N‐fixing genus (Alnus). Ea values converged when genera were classified into three breakdown rate categories, potentially due to continual water availability in streams and rivers modulating the influence of leaf chemistry on breakdown. Across all data representing 85 plant genera, the Ea was 0.34 ± 0.04 eV, or approximately half the value (0.65 eV) predicted by metabolic theory. Our results indicate that average breakdown rates may increase by 5–21% with a 1–4 °C rise in water temperature, rather than a 10–45% increase expected, according to metabolic theory. Differential warming of tropical and temperate biomes could result in a similar proportional increase in breakdown rates, despite variation in Ea values for these regions (0.75 ± 0.13 eV and 0.27 ± 0.05 eV, respectively). The relative proportions of gaseous C loss and organic matter transport downstream should not change with rising temperature given that Ea values for breakdown mediated by microbes alone and microbes plus detritivores were similar at the global scale. &NA; Warmer water enhances decomposition of organic matter in streams and rivers, but it is unclear if climate change will result in more carbon emitted to the atmosphere or transported to the ocean. We assembled over 1000 published data points on leaf litter breakdown in streams and rivers globally to assess how rates of breakdown will change with elevated temperature. Across 85 plant genera, we found that rates may increase only half as much as expected should water temperature rise by 1–4 °C. Among 12 plant genera for which temperature sensitivity could be calculated individually, higher sensitivity was correlated with lower quality litter. Similarity in the temperature sensitivity of breakdown mediated by microbes alone or microbes plus detritivores suggests the relative proportions of carbon converted to gas or transported as smaller particles will not change with elevated temperature. Figure. No caption available.