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Dive into the research topics where Jeremiah A. Johnson is active.

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Featured researches published by Jeremiah A. Johnson.


Chemical Reviews | 2016

Light-Controlled Radical Polymerization: Mechanisms, Methods, and Applications

Mao Chen; Mingjiang Zhong; Jeremiah A. Johnson

The use of light to mediate controlled radical polymerization has emerged as a powerful strategy for rational polymer synthesis and advanced materials fabrication. This review provides a comprehensive survey of photocontrolled, living radical polymerizations (photo-CRPs). From the perspective of mechanism, all known photo-CRPs are divided into either (1) intramolecular photochemical processes or (2) photoredox processes. Within these mechanistic regimes, a large number of methods are summarized and further classified into subcategories based on the specific reagents, catalysts, etc., involved. To provide a clear understanding of each subcategory, reaction mechanisms are discussed. In addition, applications of photo-CRP reported so far, which include surface fabrication, particle preparation, photoresponsive gel design, and continuous flow technology, are summarized. We hope this review will not only provide informative knowledge to researchers in this field but also stimulate new ideas and applications to further advance photocontrolled reactions.


Current Opinion in Chemical Biology | 2010

Residue-specific incorporation of non-canonical amino acids into proteins: recent developments and applications

Jeremiah A. Johnson; Ying Y. Lu; James A. Van Deventer; David A. Tirrell

Residue-specific incorporation of non-canonical amino acids into proteins allows facile alteration and enhancement of protein properties. In this review, we describe recent technical developments and applications of residue-specific incorporation to problems ranging from elucidation of biochemical mechanisms to engineering of protein-based biomaterials. We hope to inform the reader of the ease and broad utility of residue-specific non-canonical amino acid incorporation with the goal of inspiring investigators outside the field to consider applying this tool to their own research.


Journal of the American Chemical Society | 2014

A Convergent Synthetic Platform for Single-Nanoparticle Combination Cancer Therapy: Ratiometric Loading and Controlled Release of Cisplatin, Doxorubicin, and Camptothecin

Longyan Liao; Jenny Liu; Erik C. Dreaden; Stephen W. Morton; Kevin E. Shopsowitz; Paula T. Hammond; Jeremiah A. Johnson

The synthesis of polymer therapeutics capable of controlled loading and synchronized release of multiple therapeutic agents remains a formidable challenge in drug delivery and synthetic polymer chemistry. Herein, we report the synthesis of polymer nanoparticles (NPs) that carry precise molar ratios of doxorubicin, camptothecin, and cisplatin. To our knowledge, this work provides the first example of orthogonally triggered release of three drugs from single NPs. The highly convergent synthetic approach opens the door to new NP-based combination therapies for cancer.


Nature Chemistry | 2015

Iterative exponential growth of stereo- and sequence-controlled polymers

Jonathan C. Barnes; Deborah J. C. Ehrlich; Angela X. Gao; Frank A. Leibfarth; Yivan Jiang; Erica Zhou; Timothy F. Jamison; Jeremiah A. Johnson

Chemists have long sought sequence-controlled synthetic polymers that mimic natures biopolymers, but a practical synthetic route that enables absolute control over polymer sequence and structure remains a key challenge. Here, we report an iterative exponential growth plus side-chain functionalization (IEG+) strategy that begins with enantiopure epoxides and facilitates the efficient synthesis of a family of uniform >3 kDa macromolecules of varying sequence and stereoconfiguration that are coupled to produce unimolecular polymers (>6 kDa) with sequences and structures that cannot be obtained using traditional polymerization techniques. Selective side-chain deprotection of three hexadecamers is also demonstrated, which imbues each compound with the ability to dissolve in water. We anticipate that these new macromolecules and the general IEG+ strategy will find broad application as a versatile platform for the scalable synthesis of sequence-controlled polymers.


Nature Communications | 2014

Redox-responsive branched-bottlebrush polymers for in vivo MRI and fluorescence imaging

Molly A. Sowers; Jessica R. McCombs; Ying Wang; Joseph T. Paletta; Stephen W. Morton; Erik C. Dreaden; Michael D. Boska; M. Francesca Ottaviani; Paula T. Hammond; Andrzej Rajca; Jeremiah A. Johnson

Stimuli-responsive multimodality imaging agents have broad potential in medical diagnostics. Herein, we report the development of a new class of branched-bottlebrush polymer dual-modality organic radical contrast agents--ORCAFluors--for combined magnetic resonance and near-infrared fluorescence imaging in vivo. These nitroxide radical-based nanostructures have longitudinal and transverse relaxation times that are on par with commonly used heavy-metal-based magnetic resonance imaging (MRI) contrast agents. Furthermore, these materials display a unique compensatory redox response: fluorescence is partially quenched by surrounding nitroxides in the native state; exposure to ascorbate or ascorbate/glutathione leads to nitroxide reduction and a concomitant 2- to 3.5-fold increase in fluorescence emission. This behaviour enables correlation of MRI contrast, fluorescence intensity and spin concentration with tissues known to possess high concentrations of ascorbate in mice. Our in vitro and in vivo results, along with our modular synthetic approach, make ORCAFluors a promising new platform for multimodality molecular imaging.


Journal of the American Chemical Society | 2013

Addressable Carbene Anchors for Gold Surfaces

Aleksandr V. Zhukhovitskiy; Michael G. Mavros; Troy Van Voorhis; Jeremiah A. Johnson

New strategies to access functional monolayers could augment current surface modification methods. Here we present addressable N-heterocyclic carbene (ANHC) anchors for gold surfaces. A suite of experimental and theoretical methods was used to characterize ANHC monolayers. We demonstrate grafting of highly fluorinated polymers from surface-bound ANHCs. This work establishes ANHCs as viable anchors for gold surfaces.


Proceedings of the National Academy of Sciences of the United States of America | 2012

Counting primary loops in polymer gels

Huaxing Zhou; Jiyeon Woo; Alexandra M. Cok; Muzhou Wang; Bradley D. Olsen; Jeremiah A. Johnson

Much of our fundamental knowledge related to polymer networks is built on an assumption of ideal end-linked network structure. Real networks invariably possess topological imperfections that negatively affect mechanical properties; modifications of classical network theories have been developed to account for these defects. Despite decades of effort, there are no known experimental protocols for precise quantification of even the simplest topological network imperfections: primary loops. Here we present a simple conceptual framework that enables primary loop quantification in polymeric materials. We apply this framework to measure the fraction of primary loop junctions in trifunctional PEG-based hydrogels. We anticipate that the concepts described here will open new avenues of theoretical and experimental research related to polymer network structure.


Nature Chemistry | 2016

Highly branched and loop-rich gels via formation of metal-organic cages linked by polymers.

Aleksandr V. Zhukhovitskiy; Mingjiang Zhong; Eric G. Keeler; Vladimir K. Michaelis; Jessie E.P. Sun; Michael J. A. Hore; Darrin J. Pochan; Robert G. Griffin; Adam P. Willard; Jeremiah A. Johnson

Gels formed via metal–ligand coordination typically have very low branch functionality, f, as they consist of ∼2–3 polymer chains linked to single metal ions that serve as junctions. Thus, these materials are very soft and unable to withstand network defects such as dangling ends and loops. We report here a new class of gels assembled from polymeric ligands and metal-organic cages (MOCs) as junctions. The resulting ‘polyMOC’ gels are precisely tunable and may feature increased branch functionality. We show two examples of such polyMOCs: a gel with a low f based on a M2L4 paddlewheel cluster junction and a compositionally isomeric one of higher f based on a M12L24 cage. The latter features large shear moduli, but also a very large number of elastically inactive loop defects that we subsequently exchanged for functional ligands, with no impact on the gels shear modulus. Such a ligand substitution is not possible in gels of low f, including the M2L4-based polyMOC.


Proceedings of the National Academy of Sciences of the United States of America | 2015

Scalable synthesis of sequence-defined, unimolecular macromolecules by Flow-IEG

Frank A. Leibfarth; Jeremiah A. Johnson; Timothy F. Jamison

Significance Automated chemical processes, such as DNA sequencing and nucleic acid and peptide synthesis, have transformed the fields of genetics and biotechnology. There is no analogous automated or semiautomated process, however, to provide unimolecular, sequence-defined synthetic polymers to those interested in studying them. The combination of multistep continuous flow chemistry and polymer synthesis by iterative exponential growth (Flow-IEG) enables the semiautomated synthesis of perfect polymers reported herein. The user-friendly nature, scalability, and modularity of Flow-IEG provides a general strategy for the automated synthesis of sequence and architecturally defined, uniform macromolecules. We envision this polymer synthesis machine will serve as an enabling tool for both fundamental explorations and advanced applications in biotechnology, medicinal chemistry, and materials science. We report a semiautomated synthesis of sequence and architecturally defined, unimolecular macromolecules through a marriage of multistep flow synthesis and iterative exponential growth (Flow-IEG). The Flow-IEG system performs three reactions and an in-line purification in a total residence time of under 10 min, effectively doubling the molecular weight of an oligomeric species in an uninterrupted reaction sequence. Further iterations using the Flow-IEG system enable an exponential increase in molecular weight. Incorporating a variety of monomer structures and branching units provides control over polymer sequence and architecture. The synthesis of a uniform macromolecule with a molecular weight of 4,023 g/mol is demonstrated. The user-friendly nature, scalability, and modularity of Flow-IEG provide a general strategy for the automated synthesis of sequence-defined, unimolecular macromolecules. Flow-IEG is thus an enabling tool for theory validation, structure–property studies, and advanced applications in biotechnology and materials science.


Science | 2016

Quantifying the impact of molecular defects on polymer network elasticity.

Mingjiang Zhong; Rui Wang; Ken Kawamoto; Bradley D. Olsen; Jeremiah A. Johnson

Elasticity, one of the most important properties of a soft material, is difficult to quantify in polymer networks because of the presence of topological molecular defects in these materials. Furthermore, the impact of these defects on bulk elasticity is unknown. We used rheology, disassembly spectrometry, and simulations to measure the shear elastic modulus and count the numbers of topological “loop” defects of various order in a series of polymer hydrogels, and then used these data to evaluate the classical phantom and affine network theories of elasticity. The results led to a real elastic network theory (RENT) that describes how loop defects affect bulk elasticity. Given knowledge of the loop fractions, RENT provides predictions of the shear elastic modulus that are consistent with experimental observations.

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Bradley D. Olsen

Massachusetts Institute of Technology

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Aleksandr V. Zhukhovitskiy

Massachusetts Institute of Technology

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Mingjiang Zhong

Carnegie Mellon University

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Ken Kawamoto

Massachusetts Institute of Technology

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Mao Chen

Massachusetts Institute of Technology

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Rui Wang

Massachusetts Institute of Technology

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Yuwei Gu

Massachusetts Institute of Technology

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Hung V.-T. Nguyen

Massachusetts Institute of Technology

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