Jiří Danihelka

Separating habitat invasibility by alien plants from the actual level of invasion.

Habitats vary considerably in the level of invasion (number or proportion of alien plant species they contain), which depends on local habitat properties, propagule pressure, and climate. To determine the invasibility (susceptibility to invasions) of different habitats, it is necessary to factor out the effects of any confounding variables such as propagule pressure and climate on the level of invasion. We used 20 468 vegetation plots from 32 habitats in the Czech Republic to compare the invasibility of different habitats. Using regression trees, the proportion of alien plants, including archaeophytes (prehistoric to medieval invaders) and neophytes (recent invaders), was related to variables representing habitat properties, propagule pressure, and climate. The propagule pressure was expressed as the proportion of surrounding urban and industrial or agricultural land, human population density, distance from a river, and history of human colonization in the region. Urban and industrial land use had a positive effect on the proportion of both archaeophytes and neophytes. Agricultural land use, higher population density, and longer history of human impact positively affected the proportion of archaeophytes. Disturbed human-made habitats with herbaceous vegetation were most invaded by both groups of aliens. Neophytes were also relatively common in disturbed woody vegetation, such as broad-leaved plantations, forest clearings, and riverine scrub. These habitats also had the highest proportion of aliens after removing the effect of propagule pressure and climate, indicating that they are not only the most invaded, but also most invasible. These habitats experience recurrent disturbances and are rich, at least temporarily, in available nutrients, which supports the hypothesis that fluctuating resources are the major cause of habitat invasibility. The least invaded habitats were mires and alpine-subalpine grasslands and scrub. After removing the effect of propagule pressure and climate, some habitats actually invaded at an intermediate level had very low proportions of aliens. This indicates that these habitats (e.g., dry, wet, and saline grasslands, base-rich fens, and broad-leaved deciduous woodlands) are resistant to invasion.

Genetic structure among and within peripheral and central populations of three endangered floodplain violets

Understanding the partitioning of genetic variance in peripheral and central populations may shed more light on the effects of genetic drift and gene flow on population genetic structure and, thereby, improve attempts to conserve genetic diversity. We analysed genetic structure of peripheral and central populations of three insect‐pollinated violets (Viola elatior, Viola pumila, Viola stagnina) to evaluate to what extent these patterns can be explained by gene flow and genetic drift. Amplified fragment length polymorphism was used to analyse 930 individuals of 50 populations. Consistent with theoretical predictions, peripheral populations were smaller and more isolated, differentiation was stronger, and genetic diversity and gene flow lower in peripheral populations of V. pumila and V. stagnina. In V. elatior, probably historic fragmentation effects linked to its specific habitat type were superimposed on the plant geographic (peripheral‐central) patterns, resulting in lower relative importance of gene flow in central populations. Genetic variation between regions (3–6%), among (30–37%) and within populations (60–64%) was significant. Peripheral populations lacked markers that were rare and localized in central populations. Loss of widespread markers in peripheral V. stagnina populations indicated genetic erosion. Autocorrelation within populations was statistically significant up to a distance of 10–20 m. Higher average genetic similarity in peripheral populations than in central ones indicated higher local gene flow, probably owing to management practices. Peripheral populations contributed significantly to genetic variation and contained unique markers, which made them valuable for the conservation of genetic diversity.

Inferring Species Networks from Gene Trees in High-Polyploid North American and Hawaiian Violets (Viola, Violaceae)

Abstract The phylogenies of allopolyploids take the shape of networks and cannot be adequately represented as bifurcating trees. Especially for high polyploids (i.e., organisms with more than six sets of nuclear chromosomes), the signatures of gene homoeolog loss, deep coalescence, and polyploidy may become confounded, with the result that gene trees may be congruent with more than one species network. Herein, we obtained the most parsimonious species network by objective comparison of competing scenarios involving polyploidization and homoeolog loss in a high-polyploid lineage of violets (Viola, Violaceae) mostly or entirely restricted to North America, Central America, or Hawaii. We amplified homoeologs of the low-copy nuclear gene, glucose-6-phosphate isomerase (GPI), by single-molecule polymerase chain reaction (PCR) and the chloroplast trnL-F region by conventional PCR for 51 species and subspecies. Topological incongruence among GPI homoeolog subclades, owing to deep coalescence and two instances of putative loss (or lack of detection) of homoeologs, were reconciled by applying the maximum tree topology for each subclade. The most parsimonious species network and the fossil-based calibration of the homoeolog tree favored monophyly of the high polyploids, which has resulted from allodecaploidization 9–14 Ma, involving sympatric ancestors from the extant Viola sections Chamaemelanium (diploid), Plagiostigma (paleotetraploid), and Viola (paleotetraploid). Although two of the high-polyploid lineages (Boreali-Americanae, Pedatae) remained decaploid, recurrent polyploidization with tetraploids of section Plagiostigma within the last 5 Ma has resulted in two 14-ploid lineages (Mexicanae, Nosphinium) and one 18-ploid lineage (Langsdorffianae). This implies a more complex phylogenetic and biogeographic origin of the Hawaiian violets (Nosphinium) than that previously inferred from rDNA data and illustrates the necessity of considering polyploidy in phylogenetic and biogeographic reconstruction.

Long-term changes in the field layer of oak and oak-hornbeamforests under the impact of deer and mouflon.

The resampling of 46 phytosociological plots 39 years later is used to characterize changes in the field layer of oak and oak-hornbeam forests in the South-East of the Czech Republic, where high densities of fallow deer, red deer and mouflon are kept in game preserves. Detrended correspondence analysis is used to demonstrate the general pattern of change. Changes in particular species performance, cover of field and shrub layers, diversity, life form spectrum and performance of zoochores are described. It is suggested that with increasing grazing pressure, native forest species retreat while the performance of species preferring soils rich in nitrogen and species of ruderal habitats increases. Simultaneously, mesic species are gradually replaced by xeric ones. Possible causes of these changes are discussed.

Declining Genetic Diversity and Increasing Genetic Isolation toward the Range Periphery of Stipa pennata, a Eurasian Feather Grass

A common assumption in ecology and evolutionary biology is that genetic diversity declines and differentiation increases toward the edge of a species’ geographic range, where populations tend to be smaller and more isolated. We tested these predictions in a characteristic Eurasian steppe plant, Stipa pennata, by inspecting 230 AFLP bands in 26 populations (345 individuals) along a 3300-km longitudinal gradient from the range core, in Russia, to the range periphery, in central Europe. Overall, our study species showed low genetic diversity within populations (mean proportion of polymorphic ) and moderately high genetic differentiation among them (mean ). As predicted, genetic diversity declined significantly from the range core to the periphery but was not correlated with population size. Pairwise genetic differentiation was significantly higher among peripheral populations than central populations but did not show a pronounced relationship with geographic distance. Our results indicate that peripheral populations may experience higher genetic drift and lower gene flow than their central counterparts, possibly because of smaller population sizes, spatial isolation, and a more complex landscape structure. In addition, historic range fluctuations and the mixed breeding system could have enhanced the observed patterns in our study species.

High Plant Diversity of Grasslands in a Landscape Context: A Comparison of Contrasting Regions in Central Europe

Some regions and habitats harbour high numbers of plant species at a fine scale. A remarkable example is the grasslands of the White Carpathian Mountains (Czech Republic), which holds world records in local species richness; however, the causes are still poorly understood. To explore the landscape context of this phenomenon and its relationships to diversity patterns at larger scales, we compared diversity patterns in grasslands and other vegetation types in the White Carpathians with those in nearby regions lacking extremely species-rich grasslands, using data from vegetation plots and flora grid mapping of entire landscapes. Although small-scale species richness of grasslands and ruderal/weed vegetation of the White Carpathians was higher than in the nearby regions, the number of grassland and ruderal/weed species in the regional flora of the White Carpathians was not. Diversity of forests was not higher in this region at any scale. Thus the remarkably high local species richness of the White Carpathian grasslands does not result from a larger grassland species pool in the region, but from the fine-scale co-occurrence of many grassland species in this landscape, which results in the formation of grassland communities that are locally rich but with similar species composition when comparing different sites (i.e. high alpha but low beta diversity). This pattern can be partly attributed to the large total area of these grasslands, which reduces random extinctions of rare species, low geological diversity, which enables many species to occur at many sites across the landscape, and high land-cover diversity, which supports mixing of species from different vegetation types.

Chromosome numbers within the Achillea millefolium and the A. distans groups in the Czech Republic and Slovakia

TheAchillea millefolium group is represented in the Czech Republic and Slovakia by six species.Achillea setacea andA. asplenifolia are diploid;A. collina andA. pratensis are tetraploid;A. millefolium is hexaploid; andA. pannonica is octoploid. The populations from Slovakia of theA. distans group, distributed mainly in Central and south-eastern Europe, were all hexaploid. The presence of these taxa in the area studied was documented by means of chromosome counts in 285 plants originating from 110 mainly natural populations. Results of the chromosome counts are discussed against a background of literature data from Europe. For the species studied, brief descriptions as well as comments on their distribution and ecology are provided.

Revision of Central European taxa of Festuca ser. Psammophilae Pawlus: morphometrical, karyological and AFLP analysis

The taxonomic status of Central European taxa Festuca pallens s.l., F. psammophila, F. polesica, and F. vaginata was revised using the multivariate morphological analysis of well karyologically documented plants, and AFLP analysis. Six species were recognised: F. pallens Host (relict rocky habitats; diploid); F. csikhegyensis Simonk. (base-rich rocks; tetraploid); F. psammophila (Čelak.) Fritsch (acidic sands) with two subspecies, F. p. subsp. psammophila (E Germany, Poland, Bohemia) and F. p. subsp. dominii (Krajina) P. Šmarda (SW Moravia, NE Austria, SW Slovakia, C and E Poland); F. vaginata Willd. (base-rich sands mainly in the Pannonian Lowland); F. polesica Zapał. (seaside and inland sand dunes); and F. pseudovaginata Penksza (base-rich sands in the Pannonian Lowland). Identification key and distribution maps as well as informations about type specimens, exsiccata collections, synonyms, and hybrids are provided. Evolutionary relationships with the assumed putative ancestor F. pallens and the rather isolated position of F. polesica are discussed.

Morphological Characters Useful for the Delimitation of Taxa Within Viola Subsect. Viola (Violaceae): A Morphometric Study from the West Carpathians

Forty-nine morphological characters were scored or measured on 44 populations (376 individuals) of Viola subsect. Viola from the West Carpathians and adjacent areas (Slovakia, Czech Republic, Austria and Hungary). The presence of six species, namely V. alba (represented by subsp. alba), V. ambigua, V. collina, V. hirta, V. odorata and V. suavis s.l. was revealed based on pollen fertility, cytological and morphometric analyses. The morphological characters traditionally used to delimit taxa within the subsection and those revealed by our study as most reliable are widely discussed. A key for identifying the taxa and most common hybrids of subsection Viola occurring in the West Carpathians is presented. Chromosome counting and flow cytometry were used to determine the ploidy levels of the populations studied. All individuals of V. alba subsp. alba, V. collina, V. hirta and V. odorata were tetraploid, while those of V. ambigua and V. suavis s.l. were octoploid.

Plant species richness–productivity relationships in a low-productive boreal region

Local species richness–productivity (SR–P) relationship is usually reported as unimodal if long productivity gradients are sampled. However, it tends to be monotonically increasing in low-productive environments due to the decreasing part of the SR–P curve being truncated. Previous work indicated that this can hold true for forest herb layers, because of an upper bound on productivity caused mainly by canopy shading. Here, we ask whether the same pattern exists in a region with an upper bound on productivity caused by a harsh climate. We sampled herbaceous vegetation of boreal forests and grasslands in a low-productive region of central Yakutia (NE Siberia) with dry and winter-cool continental climate. We collected data on species composition, herb-layer productivity (aboveground herbaceous biomass), soil chemistry and light availability. We applied regression models to discriminate between monotonically increasing, decreasing and unimodal responses of herb-layer species richness to measured variables and analysed trends in the species-pool size and beta diversity along the productivity gradient. Our expectation of the monotonically increasing SR–P relationship was confirmed for neither forest herb layers nor grasslands. In the forest herb layers, no relationship was detected. In grasslands, the relationship was unimodal with species richness decline starting at much lower productivity levels than in more productive temperate grasslands. Potential causes for this decline are either limitation of local species richness by the species pool, which contains few species adapted to more productive habitats, or competitive exclusion, which can become an important control of species richness under lower levels of productivity than is the case in temperate grasslands.