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Featured researches published by John Barrow.


Biochemical Journal | 2005

Relative contribution of PDX-1, MafA and E47/β2 to the regulation of the human insulin promoter

Hilary M. Docherty; Colin W. Hay; Laura A. Ferguson; John Barrow; Elaine Durward; Kevin Docherty

The insulin promoter binds a number of tissue-specific and ubiquitous transcription factors. Of these, the homoeodomain protein PDX-1 (pancreatic duodenal homeobox factor-1), the basic leucine zipper protein MafA and the basic helix-loop-helix heterodimer E47/BETA2 (beta-cell E box transactivator 2; referred to here as beta2) bind to important regulatory sites. Previous studies have shown that PDX-1 can interact synergistically with E47 and beta2 to activate the rat insulin 1 promoter. The aim of the present study was to determine the relative contribution of PDX-1, MafA and E47/beta2 in regulating the human insulin promoter, and whether these factors could interact synergistically in the context of the human promoter. Mutagenesis of the PDX-1, MafA and E47/beta2 binding sites reduced promoter activity by 60, 74 and 94% respectively, in INS-1 beta-cells. In the islet glucagonoma cell line alphaTC1.6, overexpression of PDX-1 and MafA separately increased promoter activity approx. 2.5-3-fold, and in combination approx. 6-fold, indicating that their overall effect was additive. Overexpression of E47 and beta2 had no effect. In HeLa cells, PDX-1 stimulated the basal promoter by approx. 40-fold, whereas MafA, E47 and beta2 each increased activity by less than 2-fold. There was no indication of any synergistic effects on the human insulin promoter. On the other hand, the rat insulin 1 promoter and a mutated version of the human insulin promoter, in which the relevant regulatory elements were separated by the same distances as in the rat insulin 1 promoter, did exhibit synergy. PDX-1 was shown further to activate the endogenous insulin 1 gene in alphaTC1.6 cells, whereas MafA activated the insulin 2 gene. In combination, PDX-1 and MafA activated both insulin genes. Chromatin immunoprecipitation assays confirmed that PDX-1 increased the association of acetylated histones H3 and H4 with the insulin 1 gene and MafA increased the association of acetylated histone H3 with the insulin 2 gene.


Molecular and Cellular Endocrinology | 2006

Presence of endocrine and exocrine markers in EGFP-positive cells from the developing pancreas of a nestin/EGFP mouse

Andreia S. Bernardo; John Barrow; Colin W. Hay; Kenneth McCreath; Alexander Kind; Angelika Schnieke; Alan Colman; Alan Hart; Kevin Docherty

In order to purify and characterize nestin-positive cells in the developing pancreas a transgenic mouse was generated, in which the enhanced green fluorescent protein (EGFP) was driven by the nestin second intronic enhancer and upstream promoter. In keeping with previous studies on the distribution of nestin, EGFP was expressed in the developing embryo in neurones in the brain, eye, spinal cord, tail bud and glial cells in the small intestine. In the pancreas there was no detectable EGFP at embryonic day 11.5 (E11.5). EGFP expression appeared at E12.5 and increased in intensity through E14.5, E18.5 and post-natal day 1. Flow cytometry was used to quantify and purify the EGFP positive population in the E15.5 pancreas. The purified (96%) EGFP-expressing cells, which represent 20% of the total cell population, were shown by RT/PCR to express exocrine cell markers (amylase and P48) and endocrine cell markers (insulin 1, insulin 2, and Ngn3). They also expressed, at a lower level, PDX-1, Isl-1, and the islet hormones pancreatic polypeptide, glucagon and somatostatin as well as GLUT2, the stem cell marker ABCG2 and PECAM, a marker of endothelial cells. It was further shown by immunocytochemistry of the E15.5 pancreas that EGFP colocalised in separate subpopulations of cells that expressed nestin, insulin and amylase. These results support the conclusion that nestin expressing cells can give rise to both endocrine and exocrine cells. The ability to purify these putative progenitor cells may provide further insights into their properties and function.


Developmental Biology | 2008

Prediction and characterisation of a highly conserved, remote and cAMP responsive enhancer that regulates Msx1 gene expression in cardiac neural crest and outflow tract

Kerry Ann Miller; Scott Davidson; Angela Liaros; John Barrow; Marissa Lear; Danielle Heine; Stefan Hoppler; Alasdair MacKenzie

Double knockouts of the Msx1 and Msx2 genes in the mouse result in severe cardiac outflow tract malformations similar to those frequently found in newborn infants. Despite the known role of the Msx genes in cardiac formation little is known of the regulatory systems (ligand receptor, signal transduction and protein-DNA interactions) that regulate the tissue-specific expression of the Msx genes in mammals during the formation of the outflow tract. In the present study we have used a combination of multi-species comparative genomics, mouse transgenic analysis and in-situ hybridisation to predict and validate the existence of a remote ultra-conserved enhancer that supports the expression of the Msx1 gene in migrating mouse cardiac neural crest and the outflow tract primordia. Furthermore, culturing of embryonic explants derived from transgenic lines with agonists of the PKC and PKA signal transduction systems demonstrates that this remote enhancer is influenced by PKA but not PKC dependent gene regulatory systems. These studies demonstrate the efficacy of combining comparative genomics and transgenic analyses and provide a platform for the study of the possible roles of Msx gene mis-regulation in the aetiology of congenital heart malformation.


FEBS Letters | 2006

Transcription factor cycling on the insulin promoter.

John Barrow; Colin W. Hay; Laura A. Ferguson; Hilary M. Docherty; Kevin Docherty

Using MIN6 β‐cells and chromatin immunoprecipitation (ChIP) assays, the chronological sequence of binding of MafA, E47/β2 and PDX‐1 to the insulin promoter in living β‐cells were investigated. All four factors were shown to bind to the mouse insulin 2 promoter in a cyclical manner with a periodicity of approximately 10–15 min. The cyclical binding of MafA, E47 and β2 was largely unaffected by the glucose or insulin concentration in the media. However, the binding and cycling of PDX‐1 was markedly abolished in low glucose (1 mM), and this was reversed in the presence of low concentrations of insulin.


Organogenesis | 2005

Purification and Characterization of a Population of EGFP-Expressing Cells from the Developing Pancreas of a Neurogenin3/EGFP Transgenic Mouse

John Barrow; Andreia S. Bernardo; Colin W. Hay; M Blaylock; L Duncan; A Mackenzie; Kenneth McCreath; Alexander Kind; A E Schnieke; A Colman; Alan Hart; Kevin Docherty

Neurogenin 3 (ngn3) is a basic helix loop helix transcription factor that is transiently expressed in the developing mouse pancreas with peak expression around E15. In mice lacking the ngn3 gene the endocrine cells of the pancreas fail to develop suggesting that the ngn3-positive cell may represent a progenitor cell for the endocrine pancreas. In order to purify and characterise this cell in detail we have generated a transgenic mouse, in which the ngn3 promoter drives expression of enhanced green fluorescent protein (EGFP). In the E15.5 embryo EGFP was expressed in the dorsal and ventral pancreas, the duodenum, and lower intestine as well as in the brain. This pattern of expression was in keeping with the known expression profile of the endogenous ngn3 gene. Within the pancreas EGFP was localised in close proximity to cells that stained positive for ngn3, insulin, and glucagon, but was absent from regions of the pancreas that stained positive for amylase. EGFP was also present in the pancreas at E18.5, although there was no detectable expression of ngn3. At this stage EGFP did not co localise with any of the hormones or exocrine markers. EGFP+ cells were FACS purified (96%) from the E15 pancreas yielding ~10,000 cells or 1.6% of the total pancreatic cells from one litter. RT/PCR analysis confirmed that the purified cells expressed EGFP, ngn3, insulin, glucagon, somatostatin and pancreatic polypeptide. The ability to purify ngn3+ cells provides an invaluable source of material for charactering in detail their properties.


Developmental Biology | 2007

A highly conserved Wnt-dependent TCF4 binding site within the proximal enhancer of the anti-myogenic Msx1 gene supports expression within Pax3-expressing limb bud muscle precursor cells

Kerry Ann Miller; John Barrow; J. Martin Collinson; Scott Davidson; Marissa Lear; Robert E. Hill; Alasdair MacKenzie


Archive | 2008

Genomes & Developmental Control Prediction and characterisation of a highly conserved, remote and cAMP responsive enhancer that regulates Msx1 gene expression in cardiac neural crest and outflow tract

Kerry Ann Miller; Scott Davidson; Angela Liaros; John Barrow; Marissa Lear; Danielle Heine; Stefan Hoppler; Alasdair MacKenzie


Cold Spring Harbor Laboratory/Wellcome Trust Conference on Functional Genomics and Systems Biology | 2007

Closing the systems biology validation gap – comparative genomics and depressive disease

John Barrow; Scott Davidson; Marissa Lear; Alasdair MacKenzie


28th Annual Winter Neuropeptide Conference | 2007

Evidence for Glucocorticoid Mediated Regulation of Substance P Expression in the Amygdala: A Possible Mechanistic Link Between Chronic Stress and Anxiety

John Barrow; Alasdair MacKenzie


Mechanisms Underlying Emerging Themes in Neurobiology | 2006

Transcription Factor-DNA Interactions at the Substance P Enhancer, ECR1

John Barrow; Alasdair MacKenzie

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Alan Hart

University of Edinburgh

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