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Featured researches published by John J. Brady.


Rapid Communications in Mass Spectrometry | 2009

Mass spectrometry of intact neutral macromolecules using intense non-resonant femtosecond laser vaporization with electrospray post-ionization

John J. Brady; Elizabeth J. Judge; Robert J. Levis

Intact, nonvolatile, biological macromolecules can be transferred directly from the solid state into the gas phase, in ambient air, for subsequent mass spectral analysis using non-resonant femtosecond (fs) laser desorption combined with electrospray ionization (ESI). Mass spectral measurements for neat samples, including a dipeptide, protoporphyrin IX and vitamin B12 adsorbed on a glass insulating surface, were obtained using an 800 nm, 70 fs laser with an intensity of 10(13) W cm(-2). No appreciable signal was detected when atmospheric matrix-assisted or neat (matrix-free) fs laser desorption was performed without ESI, indicating neutral desorption.


Analytical Chemistry | 2011

Determination of inorganic improvised explosive device signatures using laser electrospray mass spectrometry detection with offline classification.

Paul M. Flanigan; John J. Brady; Elizabeth J. Judge; Robert J. Levis

The mass spectral detection of low vapor pressure, inorganic-based explosive signatures including ammonium nitrate, chlorate, perchlorate, sugar, and the constituents contained within black powder are reported using laser electrospray mass spectrometry. The ambient pressure mass spectrometry technique combining nonresonant, femtosecond laser vaporization with electrospray postionization revealed primary and secondary signatures for trace quantities of inorganic explosives. A mixture of complexation agents in the electrospray solvent enabled the simultaneous detection of vaporized cations, anions, and neutrals in a single measurement. An offline classifier discriminated the inorganic-based explosives based on the mass spectral signatures resulting in high fidelity identification.


Rapid Communications in Mass Spectrometry | 2010

Identification of explosives and explosive formulations using laser electrospray mass spectrometry

John J. Brady; Elizabeth J. Judge; Robert J. Levis

Mass analysis is demonstrated for the detection of sub-microgram quantities of explosive samples on a metallic surface at atmospheric pressure using laser electrospray mass spectrometry (LEMS). A non-resonant femtosecond duration laser pulse vaporizes native samples for subsequent electrospray ionization and transfer into a time-of-flight mass spectrometer. LEMS was used to detect 2,3-dimethyl-2,3-dinitrobutane (DMNB), 1,3,5-trinitroperhydro-1,3,5-triazine (RDX), 3,4,8,9,12,13-hexaoxa-1,6-diazabicyclo[4.4.4]tetradecane (HMTD), and 3,3,6,6,9,9-hexamethyl-1,2,4,5,7,8-hexaoxacyclononane (TATP) deposited on a steel surface. LEMS was also used to directly analyze composite propellant materials containing an explosive to determine the molecular composition of the explosive pellets at atmospheric pressure.


Proceedings of the National Academy of Sciences of the United States of America | 2011

Nonresonant femtosecond laser vaporization of aqueous protein preserves folded structure

John J. Brady; Elizabeth J. Judge; Robert J. Levis

Femtosecond laser vaporization-based mass spectrometry can be used to measure protein conformation in vitro at atmospheric pressure. Cytochrome c and lysozyme are vaporized from the condensed phase into the gas phase intact when exposed to an intense (1013 W/cm2), nonresonant (800 nm), ultrafast (75 fs) laser pulse. Electrospray postionization time-of-flight mass spectrometry reveals that the vaporized protein maintains the solution-phase conformation through measurement of the charge-state distribution and the collision-induced dissociation channels.


Analytical Chemistry | 2013

Classification of Smokeless Powders Using Laser Electrospray Mass Spectrometry and Offline Multivariate Statistical Analysis

Johnny J. Perez; Paul M. Flanigan; John J. Brady; Robert J. Levis

A direct, sensitive, and rapid method for the detection of smokeless powder components, from five different types of ammunition, is demonstrated using laser electrospray mass spectrometry (LEMS). Common components found in powder, such as ethyl centralite, methyl centralite, dibutyl phthalate, and dimethyl phthalate, are detected under atmospheric conditions without additional sample preparation. LEMS analysis of the powders revealed several new mass spectral features that have not been identified previously. Offline principal component analysis and discrimination of the LEMS mass spectral measurements resulted in perfect classification of the smokeless powder with respect to manufacturer.


Analytical Chemistry | 2010

Mass analysis of biological macromolecules at atmospheric pressure using nonresonant femtosecond laser vaporization and electrospray ionization.

Elizabeth J. Judge; John J. Brady; Robert J. Levis

A nonresonant femtosecond laser pulse, with an intensity of 10(13) Wcm(-2), vaporizes proteins and biomolecules intact, regardless of molecular structure, size or electronic structure for subsequent electrospray ionization and transfer into a mass spectrometer. Rapid, direct analysis from dried sample, aqueous solution and cellular material is demonstrated at atmospheric pressure using laser electrospray mass spectrometry (LEMS). Measurements are presented for lysozyme (14.3 kDa), hemoglobin from human blood, ovalbumin (45 kDa) from hen egg white and phospholipids from hen egg yolk. Mass analysis of biological material is performed without dilution, extraction or sample preparation, other than placing the biological material onto the sample plate.


Journal of the American Society for Mass Spectrometry | 2011

Analysis of Amphiphilic Lipids and Hydrophobic Proteins Using Nonresonant Femtosecond Laser Vaporization with Electrospray Post-Ionization

John J. Brady; Elizabeth J. Judge; Robert J. Levis

Amphiphilic lipids and hydrophobic proteins are vaporized at atmospheric pressure using nonresonant 70 femtosecond (fs) laser pulses followed by electrospray post-ionization prior to being transferred into a time-of-flight mass spectrometer for mass analysis. Measurements of molecules on metal and transparent dielectric surfaces indicate that vaporization occurs through a nonthermal mechanism. The molecules analyzed include the lipids 1-monooleoyl-rac-glycerol, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, 1,2-dimyristoyl-sn-glycero-3-phosphocholine, and the hydrophobic proteins gramicidin A, B, and C. Vaporization of lipids from blood and milk are also presented to demonstrate that lipids in complex systems can be transferred intact into the gas phase for mass analysis.


Analytical Chemistry | 2011

Nonresonant Femtosecond Laser Vaporization with Electrospray Postionization for ex vivo Plant Tissue Typing Using Compressive Linear Classification

Elizabeth J. Judge; John J. Brady; Paolo Emilio Barbano; Robert J. Levis

Laser electrospray mass spectrometry (LEMS) with offline classification is used to discriminate plant tissues at atmospheric pressure using an intense (10(13) W cm(-2)), nonresonant (800 nm) femtosecond laser pulse to vaporize cellular content for subsequent mass analysis. The tissue content of the plant within the 0.05 mm(2) laser interaction region is vaporized into the electrospray plume where the molecules are ionized prior to transfer into the mass spectrometer. The measurements for a flower petal, leaf, and stem of an impatiens plant reveal mass spectral signatures that enable discrimination as performed using a compressive linear classifier. The statistical analysis of the plant tissue samples reveals reproducibility of the data for replicate tissue samples and within a single tissue sample. A similar degree of discrimination was achieved for the green and white regions of aphelandra squarrosa (zebra plant) leaves.


Analytical Chemistry | 2012

Differentiation of eight phenotypes and discovery of potential biomarkers for a single plant organ class using laser electrospray mass spectrometry and multivariate statistical analysis.

Paul M. Flanigan; Laine L. Radell; John J. Brady; Robert J. Levis

Laser electrospray mass spectrometry (LEMS) coupled with offline multivariate statistical analysis is used to discriminate eight phenotypes from a single plant organ class and to find potential biomarkers. Direct analysis of the molecules from the flower petal is enabled by interfacing intense (10(13) W/cm(2)), nonresonant, femtosecond laser vaporization at ambient pressure with electrospray ionization for postionization of the vaporized analytes. The observed mass spectral signatures allowed for the discrimination of various phenotypes using principal component analysis (PCA) and either linear discriminant analysis (LDA) or K-nearest neighbor (KNN) classifiers. Cross-validation was performed using multiple training sets to evaluate the predictive ability of the classifiers, which showed 93.7% and 96.8% overall accuracies for the LDA and KNN classifiers, respectively. Linear combinations of significant mass spectral features were extracted from the PCA loading plots, demonstrating the capability to discover potential biomarkers from the direct analysis of tissue samples.


Proceedings of SPIE | 2010

Small pixel a-Si/a-SiGe bolometer focal plane array technology at L-3 Communications

Charles M. Hanson; Sameer K. Ajmera; John J. Brady; Thomas P. Fagan; William L. McCardel; Diane Morgan; Tom Schimert; Athanasios J. Syllaios; Michael F. Taylor

Recent developments in low-noise, high temperature coefficient of resistance (TCR) amorphous silicon and amorphous silicon germanium material have led to the development of uncooled focal plane arrays, with TCR in the range 3.2%/K to 3.9%/K, which has been leveraged in the small pixel FPA development at L-3 EOS. In the 17μm pixel technology node at present, 1024x768, 640×480, and 320x240 FPAs have thus far been developed. All three formats employ waferlevel vacuum packaging, with the 1024x768 representing the largest format uncooled FPA wafer-level packaged to date. FPA results from all three formats will be discussed and images will be presented.

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Barry T. Smith

United States Department of Homeland Security

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Brittney L. Argirakis

Pennsylvania State University

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