Jörg A. Ott

An ecophysiological study of some meiofauna species inhabiting a sandy beach at Bermuda

The dominant nematode and harpacticoid species inhabiting a sheltered beach at Bermuda were characterized by their vertical distribution in the sediment, by their tolerance of high temperature under oxic and anoxic conditions, and by their tolerance of extreme pH-values. In 4 species of nematodes the respiratory rate proved to be inversely proportional to the depth at which the species occurs, and directly proportional to the size of the buccal cavity. One species, the nematode Paramonhystera n.sp., is more temperature resistant at zero or near zero pO2 than at atmospheric oxygen pressure; it is the first marine metazoan in which it can be shown that a specific biological process is favourably affected by anoxic conditions if compared with the situation at normal pO2.

Reverse dissimilatory sulfite reductase as phylogenetic marker for a subgroup of sulfur-oxidizing prokaryotes.

Sulfur-oxidizing prokaryotes (SOP) catalyse a central step in the global S-cycle and are of major functional importance for a variety of natural and engineered systems, but our knowledge on their actual diversity and environmental distribution patterns is still rather limited. In this study we developed a specific PCR assay for the detection of dsrAB that encode the reversely operating sirohaem dissimilatory sulfite reductase (rDSR) and are present in many but not all published genomes of SOP. The PCR assay was used to screen 42 strains of SOP (most without published genome sequence) representing the recognized diversity of this guild. For 13 of these strains dsrAB was detected and the respective PCR product was sequenced. Interestingly, most dsrAB-encoding SOP are capable of forming sulfur storage compounds. Phylogenetic analysis demonstrated largely congruent rDSR and 16S rRNA consensus tree topologies, indicating that lateral transfer events did not play an important role in the evolutionary history of known rDSR. Thus, this enzyme represents a suitable phylogenetic marker for diversity analyses of sulfur storage compound-exploiting SOP in the environment. The potential of this new functional gene approach was demonstrated by comparative sequence analyses of all dsrAB present in published metagenomes and by applying it for a SOP census in selected marine worms and an alkaline lake sediment.

A New C-Type Lectin Similar to the Human Immunoreceptor DC-SIGN Mediates Symbiont Acquisition by a Marine Nematode

ABSTRACT Although thiotrophic symbioses have been intensively studied for the last three decades, nothing is known about the molecular mechanisms of symbiont acquisition. We used the symbiosis between the marine nematode Laxus oneistus and sulfur-oxidizing bacteria to study this process. In this association a monolayer of symbionts covers the whole cuticle of the nematode, except its anterior-most region. Here, we identify a novel Ca2+-dependent mannose-specific lectin that was exclusively secreted onto the posterior, bacterium-associated region of L. oneistus cuticle. A recombinant form of this lectin induced symbiont aggregation in seawater and was able to compete with the native lectin for symbiont binding in vivo. Surprisingly, the carbohydrate recognition domain of this mannose-binding protein was similar both structurally and functionally to a human dendritic cell-specific immunoreceptor. Our results provide a molecular link between bacterial symbionts and host-secreted mucus in a marine symbiosis and suggest conservation in the mechanisms of host-microbe interactions throughout the animal kingdom.

Diving down the reefs? Intensive diving tourism threatens the reefs of the northern Red Sea

Intensive recreational SCUBA diving threatens coral reef ecosystems. The reefs at Dahab, South Sinai, Egypt, are among the worlds most dived (>30,000 dives y(-1)). We compared frequently dived sites to sites with no or little diving. Benthic communities and condition of corals were examined by the point intercept sampling method in the reef crest zone (3m) and reef slope zone (12 m). Additionally, the abundance of corallivorous and herbivorous fish was estimated based on the visual census method. Sediments traps recorded the sedimentation rates caused by SCUBA divers. Zones subject to intensive SCUBA diving showed a significantly higher number of broken and damaged corals and significantly lower coral cover. Reef crest coral communities were significantly more affected than those of the reef slope: 95% of the broken colonies were branching ones. No effect of diving on the abundance of corallivorous and herbivorous fish was evident. At heavily used dive sites, diver-related sedimentation rates significantly decreased with increasing distance from the entrance, indicating poor buoyancy regulation at the initial phase of the dive. The results show a high negative impact of current SCUBA diving intensities on coral communities and coral condition. Corallivorous and herbivorous fishes are apparently not yet affected, but are endangered if coral cover decline continues. Reducing the number of dives per year, ecologically sustainable dive plans for individual sites, and reinforcing the environmental education of both dive guides and recreational divers are essential to conserve the ecological and the aesthetic qualities of these dive sites.

Decapod burrows in mangrove-channel and back-reef environments at the Atlantic Barrier Reef, Belize

Burrows of decapod crustaceans were investigated by in situ resin casting in various mangrove and back‐reef environments. Alpheid shrimps (A. floridanus and A. heterochaelis) were the most numerous burrowing shrimps in soft muddy sediments of mangrove channels. Their burrows consist either of a single U or a series of Us inhabited by a pair of shrimp or are Y‐shaped and inhabited by a single shrimp and a gobiid associate. Large mounds and deep funnels are produced by the thalassinidean Glypturus acanthochirus, both in bare sediments of mangrove channels and in back‐reef subtidal sediments. Their burrows consist of a spiral with several radiating branches leading to the surface and deeper blind chambers often filled with shell particles reaching to a depth of over 160 cm. The thalassinidean Neocallichirus grandimana inhabits the intertidal of protected back‐reef sands; it occupies shallow, mainly horizontal burrows. Corallia‐nassa longiventris, characteristic of coarse sediments of the intertidal and shal...

Chemoautotrophic, Sulfur-Oxidizing Symbiotic Bacteria on Marine Nematodes: Morphological and Biochemical Characterization

The marine, free-living Stilbonematinae (Nematoda: Desmodorida) inhabit the oxygen sulfide chemocline in marine sands. They are characterized by an association with ectosymbiotic bacteria. According to their ultrastructure the bacteria are Gram-negative and form morphologically uniform coats that cover the entire body surface of the worms. They are arranged in host-genus or host-species specific patterns: cocci form multilayered sheaths, rods, and crescent- or filament-shaped bacteria form monolayers. The detection of enzymes associated with sulfur metabolism and of ribulose-1,5 bisphosphate carboxylase oxygenase, as well as elemental sulfur in the bacteria indicate a chemolithoautotrophic nature of the symbionts. Their reproductive patterns appear to optimize space utilization on the host surface: vertically standing rods divide by longitudinal fission, whereas other bacteria form non-septate filaments of up to 100 μm length.

“Candidatus Thiobios zoothamnicoli,” an Ectosymbiotic Bacterium Covering the Giant Marine Ciliate Zoothamnium niveum

ABSTRACT Zoothamnium niveum is a giant, colonial marine ciliate from sulfide-rich habitats obligatorily covered with chemoautotrophic, sulfide-oxidizing bacteria which appear as coccoid rods and rods with a series of intermediate shapes. Comparative 16S rRNA gene sequence analysis and fluorescence in situ hybridization showed that the ectosymbiont of Z. niveum belongs to only one pleomorphic phylotype. The Z. niveum ectosymbiont is only moderately related to previously identified groups of thiotrophic symbionts within the Gammaproteobacteria, and shows highest 16S rRNA sequence similarity with the free-living sulfur-oxidizing bacterial strain ODIII6 from shallow-water hydrothermal vents of the Mediterranean Sea (94.5%) and an endosymbiont from a deep-sea hydrothermal vent gastropod of the Indian Ocean Ridge (93.1%). A replacement of this specific ectosymbiont by a variety of other bacteria was observed only for senescent basal parts of the host colonies. The taxonomic status “Candidatus Thiobios zoothamnicoli” is proposed for the ectosymbiont of Z. niveum based on its ultrastructure, its 16S rRNA gene, the intergenic spacer region, and its partial 23S rRNA gene sequence.

STRATEGIES OF ENERGY TRANSFER FROM MARINE MACROPHYTES TO CONSUMER LEVELS: THE POSIDONIA OCEANICA EXAMPLE

ABSTRACT A stand of Posidonia oceanica DELILE at the island of Ischia (Gulf of Naples) was investigated as to its production and the fate of the organic matter produced. A site in 4 m depth with a mean leaf biomass of 1.15 kg dry weight had a net production of 1.52 gC per square meter and day during the period of May to July 1976. About 50% of this production is consumed in the system, approximately 30% exported continuously. The only potential herbivore, the sea urchin Paracentrotus lividus LAM. consumes about 9-10% of the net production, but does not attack living Posidonia tissue. The hypothesis is presented that there is a strategy to limit direct herbivory on marine macrophytes, which constitutes an energy drain on the primary producer compartment without a feedback reward loop through the products of remineralization as in similar terrestrial ecosystems.

Metabolic studies on thiobiotic free-living nematodes and their symbiotic microorganisms.

The marine, free-living Stilbonematinae (Nematoda: Desmodoridae) are remarkable for the ectosymbiotic, prokaryotic microorganisms that populate their entire body surface. These nematodes occur in sulfidic sediments in the microoxic zone just above the sulfide maximum. Several facts point to a chemolithotrophic, sulfide oxidizing nature of the microorganisms. The oxygen uptake of three species was measured with and without their microbial coat using Cartesian and Gradient Diver microrespirometry in February 1989 at Carrie Bow Cay (Belize Barrier Reef). Symbiont-free stilbonematids exhibited constant and uniform oxygen uptake rates over several hours; rates which are significantly lower than those of oxyphilic nematodes. Freshly extracted stilbonematids, with intact bacterial coats, consumed significantly more oxygen than symbiont-free worms in the first 3 h of measurement. While the rates of aposymbiotic worms were more or less constant over time, the rates of symbiont-carrying worms exhibited a conspicuous drop during prolonged respiration. InStilbonema sp., symbiont carrying individuals kept under oxygenated conditions for more than 12 h had a respiration rate similar to those of aposymbiotic specimens. When such worms were re-incubated in sulfide-enriched seawater the respiration rate was significantly elevated. The possibility of “recharging” the oxygenated symbiosis system via sulfide-uptake is seen as an indication that storage of reduced sulfur compounds, or reserve substances synthetized in the presence of sulfide, play a decisive role in the metabolisms of the symbiotic bacteria. Migration of nematodes between sulfidic and oxidized sediment-layers are, most likely, the key to understanding the success of this nematode-bacteria symbiosis.

Paracatenula, an ancient symbiosis between thiotrophic Alphaproteobacteria and catenulid flatworms

Harnessing chemosynthetic symbionts is a recurring evolutionary strategy. Eukaryotes from six phyla as well as one archaeon have acquired chemoautotrophic sulfur-oxidizing bacteria. In contrast to this broad host diversity, known bacterial partners apparently belong to two classes of bacteria—the Gamma- and Epsilonproteobacteria. Here, we characterize the intracellular endosymbionts of the mouthless catenulid flatworm genus Paracatenula as chemoautotrophic sulfur-oxidizing Alphaproteobacteria. The symbionts of Paracatenula galateia are provisionally classified as “Candidatus Riegeria galateiae” based on 16S ribosomal RNA sequencing confirmed by fluorescence in situ hybridization together with functional gene and sulfur metabolite evidence. 16S rRNA gene phylogenetic analysis shows that all 16 Paracatenula species examined harbor host species-specific intracellular Candidatus Riegeria bacteria that form a monophyletic group within the order Rhodospirillales. Comparing host and symbiont phylogenies reveals strict cocladogenesis and points to vertical transmission of the symbionts. Between 33% and 50% of the body volume of the various worm species is composed of bacterial symbionts, by far the highest proportion among all known endosymbiotic associations between bacteria and metazoans. This symbiosis, which likely originated more than 500 Mya during the early evolution of flatworms, is the oldest known animal–chemoautotrophic bacteria association. The distant phylogenetic position of the symbionts compared with other mutualistic or parasitic Alphaproteobacteria promises to illuminate the common genetic predispositions that have allowed several members of this class to successfully colonize eukaryote cells.