Julie Keirsse

Chalcogenide glass optical waveguides for infrared biosensing.

Due to the remarkable properties of chalcogenide (Chg) glasses, Chg optical waveguides should play a significant role in the development of optical biosensors. This paper describes the fabrication and properties of chalcogenide fibres and planar waveguides. Using optical fibre transparent in the mid-infrared spectral range we have developed a biosensor that can collect information on whole metabolism alterations, rapidly and in situ. Thanks to this sensor it is possible to collect infrared spectra by remote spectroscopy, by simple contact with the sample. In this way, we tried to determine spectral modifications due, on the one hand, to cerebral metabolism alterations caused by a transient focal ischemia in the rat brain and, in the other hand, starvation in the mouse liver. We also applied a microdialysis method, a well known technique for in vivo brain metabolism studies, as reference. In the field of integrated microsensors, reactive ion etching was used to pattern rib waveguides between 2 and 300 μm wide. This technique was used to fabricate Y optical junctions for optical interconnections on chalcogenide amorphous films, which can potentially increase the sensitivity and stability of an optical micro-sensor. The first tests were also carried out to functionalise the Chg planar waveguides with the aim of using them as (bio)sensors.

Infrared glass fibers for in-situ sensing, chemical and biochemical reactions

Infrared optical fibres based on chalcogenide glasses have been designed for evanescent wave spectroscopy. The sensitivity of the optical sensor is improved in tapering the sensing zone by chemical etching and the working optical domain of the system has been tested on a chloroform sample. This original remote sensor, based on the analysis of infrared signatures, has been applied to follow the fermentation process in cider fabrication as well as to detect and monitor a bacterial biofilm.

Metabolic imaging of tissues by infrared fiber-optic spectroscopy: an efficient tool for medical diagnosis

Infrared fingerprints of molecules in biology contain much information on cells metabolism allowing one to distinguish between healthy and altered tissues. Here, to collect infrared signatures, we used evanescent wave spectroscopy based on an original infrared transmitting tapered glass fiber. A strict control of the fiber diameter in the tapered sensing zone allows high sensitivity and wide spectral range exploration from 800 to 3000 cm(-1). Then, merely in depositing the mouse liver biopsies on the fiber, this device has enable us to differentiate between tumorous and healthy tissues.

Chalcogenide glass fibers used as biosensors

The development of a new generation of chalcogenide infrared glass fibers allows making an IR sensor that permits recording the fingerprints of biomolecules in the mid infrared (MIR) range. The measurements are based on the general concept of evanescent wave spectroscopy. To improve the detection, the diameter of the fiber is locally reduced. To test this optical sensor, we measured metabolic anomalies in relation with hepatic pathologies. Mouse liver tissues have been used and MIR spectra have been recorded by a mere contact between tissues and the surface of the fiber. Spectral differences reflect metabolic alterations, these can be identified and assigned. Furthermore, histologic studies confirm these results.

Mapping Bacterial Surface Population Physiology in Real-Time: Infrared Spectroscopy of Proteus Mirabilis Swarm Colonies

We mapped the space–time distribution of stationary and swarmer cells within a growing Proteus mirabilis colony by infrared (IR) microspectroscopy. Colony mapping was performed at different positions between the inoculum and the periphery with a discrete microscope-mounted IR sensor, while continuous monitoring at a fixed location over time used an optical fiber based IR–attenuated total reflection (ATR) sensor, or “optrode.” Phenotypes within a single P. mirabilis population relied on identification of functional determinants (producing unique spectral signals) that reflect differences in macromolecular composition associated with cell differentiation. Inner swarm colony domains are spectrally homogeneous, having patterns similar to those produced by the inoculum. Outer domains composed of active swarmer cells exhibit spectra distinguishable at multiple wavelengths dominated by polysaccharides. Our real-time observations agree with and extend earlier reports indicating that motile swarmer cells are restricted to a narrow (approximately 3 mm) annulus at the colony edge. This study thus validates the use of an IR optrode for real-time and noninvasive monitoring of biofilms and other bacterial surface populations.

Chalcogenide glass fibers used for in situ infrared spectroscopy in biology and medicine

Chalcogenide glass optical fibers possess very low optical losses in the middle infrared range from 2 to 12 mm. They were used to implement remote infrared spectroscopy, known as Fiber Evanescent Wave Spectroscopy (FEWS). Due to their hydrophobic behavior, such sensor is especially suitable for application in biology and medicine where water is a nuisance to detect relevant information. Moreover, the design of the sensor using tapered fibers enables to improve the signal to noise ratio. Then, once coupled with unsupervised analysis technique such as Principle Component Analysis (PCA), it has been shown that this tool is efficient to differentiate between obese and control mice by recording their serum FEWS spectra. The same method has been carried out to detect in situ the both phenotypes of a bacterial culture.

Infrared fiber sensors for applications in chemistry and biology

Infrared fibers, based on low phonon chalcogenide glasses have been developed in order to measure the infrared signatures of several chemical and biological materials. It is shown, that in tapering the fibers, the sensitivity and flexibility are significantly improved, allowing in situ experiments, in remote conditions or on biological tissues. Information on soil contamination, for environment protection, as well as detection of anomalies of on liver mice metabolism, are described.