Junpei Kuwabara

Allosteric supramolecular triple-layer catalysts

Chloride Control of a Catalyst Allosteric regulation of proteins and enzymes allows their conformation to be controlled by changes in the concentration of effector-binding molecules; reactivity can be controlled by changing access to the active catalytic site. The supramolecular control of conformation through multiple weaker interactions has been exploited in organometallic catalysts that can open or close access to reactive sites around a metal center. Yoon et al. (p. 66) now show how chloride ions can be used to control a rhodium polymerization catalyst in which two metal centers are bridged by a linker bearing aromatic groups. When Cl− is present, reactive sites remain available on the metal centers. When Cl− is removed by abstracting agents, aromatic groups on one of the other ligands on the Rh centers can bind to the linker to form a triple-layer sandwich structure. Formation of this supramolecular structure blocks access of reactants to the metal centers. A chloride ligand is used to control the access of reactants to a rhodium polymerization catalyst. Allosteric regulation of organometallic catalysts could allow for greater control over reactions. We report an allosteric supramolecular structure in which a monometallic catalytic site has been buried in the middle layer of a triple-layer complex. Small molecules and elemental anions can open and close this complex and reversibly expose and conceal the catalytic center. The ring-opening polymerization of ε-caprolactone can be turned on by the in situ opening of the triple-layer complex and then completely turned off by reforming it through the abstraction of Cl–, the allosteric effector agent, without appreciable loss of catalytic activity. This process can regulate the molecular weights of the resulting polymers.

Direct arylation polycondensation for the synthesis of bithiophene-based alternating copolymers

Direct arylation polycondensation reactions using a simple catalytic system gave eight kinds of bithiophene-based alternating copolymers. The conditions for the reactions of 3,3′,4,4′-tetramethylbithiophene with dibromoarylenes were optimized to obtain high-molecular-weight polymers without formation of cross-linked structures. In the reaction of a dibromoarylene containing a reactive C–H bond, a short reaction time (1.5 h) was suitable for preventing side reactions. In contrast, a long reaction time (6 h) gave high-molecular-weight polymers from dibromoarylene monomers without a reactive C–H bond. This polycondensation reaction enables the synthesis of polymers containing dye structures such as diketopyrrolopyrrole and isoindigo, which are applicable as materials for polymer solar cells.

Detailed Optimization of Polycondensation Reaction via Direct C–H Arylation of Ethylenedioxythiophene

The polycondensation reaction of 3,4-ethylenedioxythiophene with 2,7-dibromo-9,9-dioctylfluorene via Pd-catalyzed direct arylation gives poly[(3,4-ethylenedioxythiophene-2,5-diyl)-(9,9-dioctylfluorene-2,7-diyl)]. The reaction conditions are optimized in terms of the Pd precatalysts, reaction time, and carboxylic acid additives. The combination of 1 mol% Pd(OAc)(2) and 1-adamantanecarboxylic acid as an additive is the optimized catalytic system, and it yields the corresponding polymer with a molecular weight of 39,400 in 89% yield. The polycondensation reaction, followed by an end-capping reaction, effectively provides a linear polymer without Br terminals.

Synthesis of 4,4′-dinonyl-2,2′-bithiazole-based copolymers via Pd-catalyzed direct C–H arylation

Direct arylation polycondensation of a bithiazole derivative with dibromoarylenes gave the corresponding bithiazole-based copolymers using the phosphine-free catalytic system in a short reaction time.

Chemical modification of amino acids by atmospheric-pressure cold plasma in aqueous solution

Plasma medicine is an attractive new research area, but the principles of plasma modification of biomolecules in aqueous solution remain elusive. In this study, we investigated the chemical effects of atmospheric-pressure cold plasma on 20 naturally occurring amino acids in aqueous solution. High-resolution mass spectrometry revealed that chemical modifications of 14 amino acids were observed after plasma treatment: (i) hydroxylation and nitration of aromatic rings in tyrosine, phenylalanine and tryptophan; (ii) sulfonation and disulfide linkage formation of thiol groups in cysteine; (iii) sulfoxidation of methionine and (iv) amidation and ring-opening of five-membered rings in histidine and proline. A competitive reaction experiment using 20 amino acids demonstrated that sulfur-containing and aromatic amino acids were preferentially decreased by the plasma treatment. These data provide fundamental information for elucidating the mechanism of protein inactivation for biomedical plasma applications.

The effect of a solvent on direct arylation polycondensation of substituted thiophenes

In the direct arylation polycondensation of thiophene derivatives, toluene was found to be a suitable solvent for electron-deficient thiophenes, whereas dimethylacetamide (DMAc) was suitable for electron-rich thiophenes.

Spherical Assemblies from π-Conjugated Alternating Copolymers: Toward Optoelectronic Colloidal Crystals

Self-assembly of conducting polymers, which are often used as photoabsorbing, charge-transporting, and photoemission layers of organic photovoltaic and light-emitting devices, were comprehensively studied by means of slow precipitation from polymer solutions upon addition of a vapor of nonsolvents. Polymers such as polyfluorene and polythiophene having a single monomer component hardly formed defined and discrete objects but only gave ill-defined aggregates. In contrast, alternating copolymers typically having both fluorene and thiophene components in their repeating unit self-assembled into well-shaped spheres with diameters ranging from several hundreds of nanometers to several micrometers. Such clear differences in terms of the assembling geometries derive from the rigidity and crystallinity of the polymers, where the copolymers possess large steric hindrance on their backbone that reduces planarity of the polymers and inhibits anisotropic crystal growth, leading to the formation of structurally isotropic spheres. Changing the assembling parameters can systematically control diameter and deviation of the spheres. Furthermore, photocarrier lifetimes of the spheres were markedly enhanced by more than 3 orders of magnitude in comparison with those of cast films from their solutions. This research gives a useful guide for preparation of colloidal crystals from π-conjugated polymers toward their optoelectronic applications.

Self-assembled conjugated polymer spheres as fluorescent microresonators

Confinement of light inside an active medium cavity can amplify emission. Whispering gallery mode (WGM) is one of mechanisms that amplifies light effectively by confining it inside high-refractive-index microstructures, where light propagates along the circumference of a sphere via total internal reflection. Here we show that isolated single microspheres of 2–10 μm diameter, formed from self-assembly of π-conjugated alternating copolymers, display WGM photoemission induced by laser pumping. The wavelengths of the emission peaks depend sensitively on the sphere size, position of the excitation spot and refractive index of each polymer. The Q-factor increases with increasing sphere diameter and displays a linear correlation with the reciprocal radius, indicating that the small curvature increases the efficacy of the total internal reflection. WGM photoemission from π-conjugated polymer microspheres is unprecedented and may be of high technological impact since the microspheres fulfill the role of fluorophores, high-refractive-index media and resonators simultaneously, in addition to their simple fabrication process.

Effects of the Terminal Structure, Purity, and Molecular Weight of an Amorphous Conjugated Polymer on Its Photovoltaic Characteristics

The photovoltaic characteristics of an amorphous polymer containing EDOT and fluorene units were investigated. In particular, the effects of the terminal structure, residual amount of Pd, and molecular weight were systematically investigated. Direct arylation polycondensation of EDOT followed by an established purification method readily afforded polymers with different terminal structures, Pd contents, and molecular weights. Of these factors, the terminal structure of the polymer was a crucial factor affecting the photovoltaic characteristics. For example, the polymer with a Br terminal had a PCE of 2.9% in bulk-heterojunction organic photovoltaics (BHJ OPVs) with a fullerene derivative, whereas the polymer without a Br terminal had a PCE of 4.6% in the same cell configuration. The decreased Pd residues and high molecular weights of the polymers increased the long-term stability of the devices. Moreover, BHJ OPVs containing the high-molecular-weight polymer could be fabricated with an environmentally friendly nonhalogenated solvent.

Molecular mechanism of plasma sterilization in solution with the reduced pH method: importance of permeation of HOO radicals into the cell membrane

Sterilization of certain infected areas of the human body surface is necessary for dental and surgical therapies. Because the blood is filled with body fluid, sterilization in solution is essential. In vitro solution sterilization has been successively carried out using a combination of low-temperature atmospheric-pressure plasma and the reduced pH method, where the solution is sufficiently acidic. Here, we show the molecular mechanism of such plasma sterilization in solution based on microbiology. Three kinds of bacteria were inactivated by plasma treatment under various pH conditions. The theoretical and experimental models revealed that the sterilization was characterized by the concentration of hydroperoxy radicals (HOO·), which were dependent on the pH value. Bacterial inactivation rates were proportional to the HOO· concentrations calculated by the theoretical model. To evaluate the penetration of radicals into the cell membrane, a bacterial model using dye-included micelles was used. Decolouration rates of the model were also in proportion with the calculated HOO· concentrations. These results indicate that the key species for plasma sterilization were hydroperoxy radicals. More importantly, the high permeation of hydroperoxy radicals into the cell membrane plays a key role for efficient bactericidal inactivation using the reduced pH method.