Kwang-Tsao Shao

High Value and Long Life—Double Jeopardy for Tunas and Billfishes

The first standardized, global assessment of these fishes, using Red List criteria, reveals threatened species needing protection. There is growing concern that in spite of the healthy status of several epipelagic (living near the surface) fish stocks (1), some scombrid (tunas, bonitos, mackerels, and Spanish mackerels) and billfish (swordfish and marlins) species are heavily overfished and that there is a lack of resolve to protect against overexploitation driven by high prices (2–5). Many populations are exploited by multinational fisheries whose regulation, from a political perspective, is exceedingly difficult. Thus, assessment and management is complicated and sometimes ineffective (4). Regional Fisheries Management Organizations (RFMOs) were created to manage and conserve scombrids and billfishes because of their transnational distributions and widespread economic importance (6). However, species-specific catch data for many scombrids and billfishes are not collected or are aggregated with other species. Even for the larger tunas, for which relatively rich data exist, population assessments and data are complex (1) and are difficult to combine across RFMOs, which prompts a need for alternative means of assessment.

Evaluating the accuracy of morphological identification of larval fishes by applying DNA barcoding.

Due to insufficient morphological diagnostic characters in larval fishes, it is easy to misidentify them and difficult to key to the genus or species level. The identification results from different laboratories are often inconsistent. This experiment aims to find out, by applying DNA barcoding, how inconsistent the identifications can be among larval fish taxonomists. One hundred morphotypes of larval fishes were chosen as test specimens. The fishes were collected with either larval fish nets or light traps in the northern, southern and northwestern waters of Taiwan. After their body lengths (SL) were measured and specimen photos were taken, all specimens were delivered, in turn, to five laboratories (A–E) in Taiwan to be identified independently. When all the results were collected, these specimens were then identified using COI barcoding. Out of a total of 100 specimens, 87 were identified to the family level, 79 to the genus level and 69 to the species level, based on the COI database currently available. The average accuracy rates of the five laboratories were quite low: 80.1% for the family level, 41.1% for the genus level, and 13.5% for the species level. If the results marked as “unidentified” were excluded from calculations, the rates went up to 75.4% and 43.7% for the genus and species levels, respectively. Thus, we suggest that larval fish identification should be more conservative; i.e., when in doubt, it is better to key only to the family and not to the genus or species level. As to the most misidentified families in our experiment, they were Sparidae, Scorpaenidae, Scombridae, Serranidae and Malacanthidae. On the other hand, Mene maculata and Microcanthus strigatus were all correctly identified to the species level because their larvae have distinct morphology. Nevertheless, barcoding remains one of the best methods to confirm species identification.

Population Structure and Genetic Variability of Six Bar Wrasse ( Thallasoma hardwicki ) in Northern South China Sea Revealed by Mitochondrial Control Region Sequences

The genetic relationships among northern South China Sea populations of the six bar wrasse (Thallasoma hardwicki) were investigated. Fish collected from the Solomon Islands were used for geographic comparison. In 1998 and 1999, a total of 100 fish were sampled from 6 localities of the northern South China Sea and 3 localities of the Solomon Islands. Genetic variations in DNA sequences were examined from the first hypervariable region (HVR-1) of the mitochondrial control region, as amplified by polymerase chain reaction. High levels of haplotypic diversity (h = 0.944 ± 0.0016, π = 0.0224 ± 0.01171) in the HVR-1 region of the mitochondrial control region of T. hardwicki were detected. This yielded 94 haplotypes that exhibited a minimum spanning tree with a starburst structure, suggestive of a very recent origin for most haplotypes. Neutrality tests indicated that the pattern of genetic variability in T. hardwicki is consistent either with genetic hitchhiking by an advantageous mutation or with population expansion. Partitioning populations into coherent geographic groups divided the northern South China Sea samples (ΦCT = 0.0313, P < 0.001) into 3 major groups: a north-central group composed of northwestern Taiwan and northern Vietnam; a southwestern group containing southern Vietnam; and a southern group including the central Philippines. These results are in concordance with mesoscale boundaries proposed by allozyme markers, thus highlighting the importance of identifying transboundary units for the conservation and management of fisheries in the South China Sea.

Fish Assemblages in the Mangrove Creeks of Northern and Southern Taiwan

A bimonthly study of the spatial variations in fish assemblages in the six mangrove creeks along the western coast of Taiwan was conducted from February 1996 to February 1997. Fyke nets were used to collect fishes in each of three creeks in the north (subtropical) and south (tropical) regions. A total of 79 fish species belonging to 33 families were collected and, of these, the Gobiidae, Mugilidae, Leiognathidae, and Cichlidae were the most diverse families. The fish assemblages in each creek were dominated by a small number of small fishes, most of which are the young of commercially important species. Their life cycles occurred to some extent in estuarine environments. Analyses by classification and ordination separated the assemblages into a northern group and a southern group and showed that the assemblages were far more temporally varied in the southern creeks than in the northern creeks. Fifty fish species were recorded in the northern creeks and 49 fish species in the southern creeks, with 20 species present in both regions. No significant difference in number of species per netting was detected between the regions. The number of individuals and biomass per netting were greater in the northern creeks than in the southern creeks. Rainfall and organic content of sediments may be responsible for the difference in fish abundance between the regions. In the northern creeks the assemblages were dominated by Liza macrolepis and Liza affinis in winter and spring, but the assemblages were more diverse in summer and fall. In the southern creeks, the assemblages were always characterized by several species and their dominance varied from month to month. The differences in the assemblage structure in northern and southern mangrove creeks are likely due to the oceanic current patterns around Taiwan.

Molecular phylogeny of 48 species of damselfishes (Perciformes: Pomacentridae) using 12S mtDNA sequences

Phylogenetic relastionships within the family pomacentridae teleostei: Perciformes) were inferred by analyzing a portion of the 12S mitochondrial ribosomal DNA gene. Thirty-four pomacentrid species were sequenced for this study and the resulting data were combined with previously published pomacentrid sequence data to form a combined matrix of 53 pomacentrids representing 48 different species in 18 genera. Four outgroup species were also drawn from published data; these taxa were taken from the other three putative families of the suborder Labroidei, as well as a single representative of the family Moronidae. The data set contained 1053 data columns after alignment according to ribosomal secondary structure and the removal of all ambiguously aligned positions. The resulting strict consensus tree topology generally agreed with the previous molecular hypothesis, and recovers a monophyletic Pomacentridae and subfamily Amphiprioninae. The two other subfamilies included, Chrominae and Pomacentrinae, were found to be polyphyletic. A monophyletic group consisting of the Amphiprioninae, Pomacentrus, Acanthochromis, Amblyglyphidodon, Neoglyphidodon, Chrysiptera, Neopomacentrus, and Teixeirichthys was found. This group was recovered as the sister group to a clade consisting of a paraphyletic Chromis and a monophyletic Dascyllus. A sister-group relationship between the genus Pomacentrus and the subfamily Amphiprioninae was observed.

Multiple factors have shaped the phylogeography of Chinese spiny loach Cobitis sinensis in Taiwan as inferred from mitochondrial DNA variation

Mitochondrial DNA cytochrome b sequences (1140 bp) in 61 specimens of Chinese spiny loach Cobitis sinensis from 12 drainages in Taiwan were identified as two major clades, exhibiting a southern and a northern distribution, north of TzengWen and south of TzengWen (including TzengWen), respectively. The divergence time between these two phylogroups was estimated at 7.34-9.06 million years before present (B.P.), but these two phylogroups were formed c. 3.41-4.23 and 2.22-2.75 M B.P., respectively. Moreover, geological events have been recalculated that Taiwan Island emerged above sea level at an estimate of c. 4-5 M B.P., and quickly became its present shape at c. 2 M B.P. through mountain building. These results suggest that these two major clades of C. sinensis in Taiwan might originate from two different continental populations, since the islands initial isolation in the Pliocene. Within southern Taiwan, the initial colonization was hypothesized to be in KaoPing River, followed by its northward dispersal. The high divergence between KaoPing and TzengWen was influenced by glaciations and landforms. Within north Taiwan, the colonization was from the Miaoli Plateau through western Taiwan to north-eastern and northern Taiwan. This dispersal pattern is concordant with the previously proposed hypothesis. Apparently, both geological and phylogeographic evidence suggested that river capture of the upper Takia River by the LanYang River promoted range expansion in freshwater fishes and also indicated that the Central Range within Taiwan did not act as a barrier to the dispersal of C. sinensis.

A trophic model of fringing coral reefs in Nanwan Bay, southern Taiwan suggests overfishing

Several coral reefs of Nanwan Bay, Taiwan have recently undergone shifts to macroalgal or sea anemone dominance. Thus, a mass-balance trophic model was constructed to analyze the structure and functioning of the food web. The fringing reef model was comprised of 18 compartments, with the highest trophic level of 3.45 for piscivorous fish. Comparative analyses with other reef models demonstrated that Nanwan Bay was similar to reefs with high fishery catches. While coral biomass was not lower, fish biomass was lower than those of reefs with high catches. Consequently, the sums of consumption and respiratory flows and total system throughput were also decreased. The Nanwan Bay model potentially suggests an overfished status in which the mean trophic level of the catch, matter cycling, and trophic transfer efficiency are extremely reduced.

Comparative Analysis of the Diets of Pygmy Sperm Whales and Dwarf Sperm Whales in Taiwanese Waters

Stomach contents were analyzed of six pygmy sperm whales (Kogia breviceps) and five dwarf sperm whales (Kogia sima) which were taken as by-catch or were stranded specimens in coastal Taiwan from 1998 through 2000. Twenty-two species in 12 families of oceanic cephalopods were identified. In pygmy sperm whales, Enoploteuthis chunii, Sthenoteuthis oualaniensis, and Taonius pavo were the primary prey in the diet, while E. chunii, Histioteuthis miranda, and T. pavo were the most important prey items ingested by dwarf sperm whales. Although the primary prey items these two species ingested were very similar, each item comprised a different proportion for each whale species. A similarity test demonstrated a significant difference in prey composition, and SIMPER analysis showed that E. chunii was ranked first and contributed 37.1 % to the average dissimilarity between pygmy and dwarf sperm whales. Pygmy sperm whales fed on much larger T. pavo compared to those ingested by dwarf sperm whales, while dwarf sperm whales ingested more H. miranda than did pygmy sperm whales. These results support the view that pygmy sperm whales live seaward of the continental shelf and that dwarf sperm whales live more in coastal waters.

Toward Establishing a Spratly Islands International Marine Peace Park: Ecological Importance and Supportive Collaborative Activities with an Emphasis on the Role of Taiwan

The Spratly Islands constitute one of the earths most ecologically significant areas, hosting a high diversity of marine species, providing critical habitats for endangered species, and providing marine larvae to reestablish depleted stocks among the heavily overfished and degraded coastal ecosystems of the South China Sea. Territorial disputes have led to the establishment of environmentally destructive, socially and economically costly military outposts on many of the islands. Given the rapid proliferation of international peace parks around the world, it is time to take positive steps toward the establishment of a Spratly Islands Marine Peace Park. Its purpose would be to manage the areas natural resources and alleviate regional tensions via a freeze on claims and claim supportive actions.

A new species ofRhinogobius (Teleostei: Gobiidae) from Fujian Province, China

A new freshwater goby,Rhinogobius xianshuiensis sp. nov. was collected from the upper Mulan River basin of Xianyou County, Fujian Province, eastern China. The species is distinguished from related species in the region by 3–7 predorsal scales, 27 vertebrae, cephalic lateralis canals always always with 2 derived post-orbital pores (ε1) in adults, a reddish-brown vertical line below the anterior margin of the eye, and a red netlike pattern on the opercle. A key to species ofRhinogobius with higher vertebral numbers (27–29) from eastern China, Taiwan and Japan is provided.