Laura Hoikkala

The effect of iron on the biodegradation of natural dissolved organic matter

Iron (Fe) may alter the biodegradation of dissolved organic matter (DOM), by interacting with (DOM), phosphorus (P) and microbes. We isolated DOM and a bacterial community from boreal lake water and examined bacterial growth on DOM in laboratory experiments. Fe was introduced either together with DOM (DOM-Fe) or into bacterial suspension, which led to the formation of insoluble Fe-precipitates on bacterial surfaces (Fe coating). In the latter case, the density of planktonic bacteria was an order of magnitude lower than that in the corresponding treatment without introduced Fe. The association of Fe with DOM decreased bacterial growth, respiration, and growth efficiency compared with DOM alone at the ambient concentration of dissolved P (0.16 µmol L–1), indicating that DOM-associated Fe limited the bioavailability of P. Under a high concentration (21 µmol L–1) of P, bacterial biomass and respiration were similar or several times higher in the treatment where DOM was associated with Fe than in a corresponding treatment without Fe. Based on the next generation sequencing of 16S rRNA genes, Caulobacter dominated bacterial communities grown on DOM-Fe. This study demonstrated that association of Fe with a bacterial surface or P reduce bacterial growth and the consumption of DOM. In contrast, DOM-Fe is bioavailable and bound Fe can even stimulate bacterial growth on DOM when P is not limiting.

Effects of agricultural land use on dissolved organic carbon and nitrogen in surface runoff and subsurface drainage

Dissolved organic carbon (DOC) load in discharges from cultivated soils may have negative impacts on surface waters. The magnitude of the load may vary according to soil properties or agricultural management practices. This study quantifies the DOC load of cultivated mineral soils and investigates whether the load is affected by agricultural practices. Discharge volumes and concentrations of DOC and dissolved organic nitrogen (DON) were continually measured at three sites from surface runoff and artificial subsurface drainage or from combined total discharge over a two-year period (2012-2014). Two experimental sites in South-West Finland had clayey soils (with soil carbon contents of 2.7-5.9% in the topmost soil layer), and the third site in West-Central Finland had sandy soil (soil carbon contents of 4.3-6.2%). Permanent grassland, organic manure application, mineral fertilization, and conventional ploughing or no-till activities were studied. Furthermore, the biodegradable DOC pool of surface runoff and subsurface drainage water from no-till and ploughed fields was estimated in a 2-month incubation experiment with natural bacterial communities collected from the Baltic Sea seawater. The annual DOC and DON loads were affected by discharge volume and seasonal weather conditions. The loads varied between 25-52kgha-1 and 0.8-3.2kgha-1, respectively, and were comparable to those from boreal forests with similar soil types. The DOC load increased with increasing topsoil carbon content at all sites. There were slightly higher DOC concentrations and DOC load from permanent grassland, but otherwise we could not distinguish any clear management-induced differences in the total DOC loads. While only 6-17% of the DOC in discharge water was biologically degraded during the 2-month incubation, the proportion of biodegradable (labile) DOC in surface runoff appeared to increase when soil was ploughed compared to no-till.

Autochthonous Dissolved Organic Matter Drives Bacterial Community Composition during a Bloom of Filamentous Cyanobacteria

The dynamics of dissolved organic matter (DOM) and the succession of bacterial community composition (BCC) were investigated during bloom of filamentous cyanobacteria in a mesocosm experiment conducted in the western Gulf of Finland, the Baltic Sea. The effects of labile dissolved organic carbon (glucose), inorganic nutrients (N and P) and large zooplankton (> 100 µm) on the DOM pool, bacterial production and the composition of bacterial communities were analysed over a period of ten days. In addition, the bioavailability of dissolved organic carbon (DOC) and its turnover by heterotrophic bacteria (biomass and respiration) were investigated in three one-week bacterial bioassays. Heterotrophic bacteria rapidly utilised about 25-55 % of the DOC released from the plankton community, thus assuming it to be highly labile DOC. More than half of the accumulating net DOC pool was degraded over seven days, thus assuming it to be labile. In average, labile autochthonous DOC was degraded with bacterial growth efficiency of 25%. A distinct succession of bacterial communities accompanied the supply of autochthonous DOM, with the most prominent responses occurring in a few single phylotypes of the Delta- and Gammaproteobacterial classes. About 40% of the variation in the relative shares of dominant bacterial classes could be explained by changes in the functional groups of autotrophs. Inorganic nutrient treatment proved beneficial to Deltaproteobacteria and increased bacterial production over that of other mesocosms.

The effect of iron on the biodegradation of natural dissolved organic matter: IRON AND NDOM BIODEGRADATION

Iron (Fe) may alter the biodegradation of dissolved organic matter (DOM), by interacting with DOM, phosphorus (P), and microbes. We isolated DOM and a bacterial community from boreal lake water and examined bacterial growth on DOM in laboratory experiments. Fe was introduced either together with DOM (DOM-Fe) or into bacterial suspension, which led to the formation of insoluble Fe precipitates on bacterial surfaces (Fe coating). In the latter case, the density of planktonic bacteria was an order of magnitude lower than that in the corresponding treatment without introduced Fe. The association of Fe with DOM decreased bacterial growth, respiration, and growth efficiency compared with DOM alone at the ambient concentration of dissolved P (0.16 µmol L−1), indicating that DOM-associated Fe limited the bioavailability of P. Under a high concentration (21 µmol L−1) of P, bacterial biomass and respiration were similar or several times higher in the treatment where DOM was associated with Fe than in a corresponding treatment without Fe. Based on the next generation sequencing of 16S rRNA genes, Caulobacter dominated bacterial communities grown on DOM-Fe. This study demonstrated that association of Fe with a bacterial surface or P reduces bacterial growth and the consumption of DOM. In contrast, DOM-Fe is bioavailable and bound Fe can even stimulate bacterial growth on DOM when P is not limiting.