Lukas Helfen

On the implementation of computed laminography using synchrotron radiation

Hard x rays from a synchrotron source are used in this implementation of computed laminography for three-dimensional (3D) imaging of flat, laterally extended objects. Due to outstanding properties of synchrotron light, high spatial resolution down to the micrometer scale can be attained, even for specimens having lateral dimensions of several decimeters. Operating either with a monochromatic or with a white synchrotron beam, the method can be optimized to attain high sensitivity or considerable inspection throughput in synchrotron user and small-batch industrial experiments. The article describes the details of experimental setups, alignment procedures, and the underlying reconstruction principles. Imaging of interconnections in flip-chip and wire-bonded devices illustrates the peculiarities of the method compared to its alternatives and demonstrates the wide application potential for the 3D inspection and quality assessment in microsystem technology.

Phase-contrast and holographic computed laminography

In-line phase contrast is combined with laminography to image in three dimensions regions of interest in laterally extended flat specimens of weak absorption contrast. The principle of the method and a theoretical description of the imaging process are outlined. The present instrumental implementation enables reconstructing nondestructively the internal structure at different lateral specimen positions with micron resolution. The feasibility and application potential are demonstrated for both phase-contrast and holographic (i.e., using phase retrieval) laminography by the three-dimensional imaging of fuel-cell diffusion layers.

Comparative study of multilayers used in monochromators for synchrotron-based coherent hard X-ray imaging

A systematic study is presented in which multilayers of different composition (W/Si, Mo/Si, Pd/B(4)C), periodicity (from 2.5 to 5.5 nm) and number of layers have been characterized. In particular, the intrinsic quality (roughness and reflectivity) as well as the performance (homogeneity and coherence of the outgoing beam) as a monochromator for synchrotron radiation hard X-ray micro-imaging are investigated. The results indicate that the material composition is the dominating factor for the performance. By helping scientists and engineers specify the design parameters of multilayer monochromators, these results can contribute to a better exploitation of the advantages of multilayer monochromators over crystal-based devices; i.e. larger spectral bandwidth and high photon flux density, which are particularly useful for synchrotron-based micro-radiography and -tomography.

Comparison of image quality in computed laminography and tomography

In computed tomography (CT), projection images of the sample are acquired over an angular range between 180 to 360 degrees around a rotation axis. A special case of CT is that of limited-angle CT, where some of the rotation angles are inaccessible, leading to artefacts in the reconstrucion because of missing information. The case of flat samples is considered, where the projection angles that are close to the sample surface are either i) completely unavailable or ii) very noisy due to the limited transmission at these angles. Computed laminography (CL) is an imaging technique especially suited for flat samples. CL is a generalization of CT that uses a rotation axis tilted by less than 90 degrees with respect to the incident beam. Thus CL avoids using projections from angles closest to the sample surface. We make a quantitative comparison of the imaging artefacts between CL and limited-angle CT for the case of a parallel-beam geometry. Both experimental and simulated images are used to characterize the effect of the artefacts on the resolution and visible image features. The results indicate that CL has an advantage over CT in cases when the missing angular range is a significant portion of the total angular range. In the case when the quality of the projections is limited by noise, CT allows a better tradeoff between the noise level and the missing angular range.

A versatile indirect detector design for hard X-ray microimaging

Indirect X-ray detectors are of outstanding importance for high resolution imaging, especially at synchrotron light sources: while consisting mostly of components which are widely commercially available, they allow for a broad range of applications in terms of the X-ray energy employed, radiation dose to the detector, data acquisition rate and spatial resolving power. Frequently, an indirect detector consists of a thin-film single crystal scintillator and a high-resolution visible light microscope as well as a camera. In this article, a novel modular-based indirect design is introduced, which offers several advantages: it can be adapted for different cameras, i.e. different sensor sizes, and can be trimmed to work either with (quasi-)monochromatic illumination and the correspondingly lower absorbed dose or with intense white beam irradiation. In addition, it allows for a motorized quick exchange between different magnifications / spatial resolutions. Developed within the European project SCINTAX, it is now commercially available. The characteristics of the detector in its different configurations (i.e. for low dose or for high dose irradiation) as measured within the SCINTAX project will be outlined. Together with selected applications from materials research, non-destructive evaluation and life sciences they underline the potential of this design to make high resolution X-ray imaging widely available.

Viewing the Early Stage of Metal Foam Formation by Computed Tomography using Synchrotron Radiation

Foamed aluminium alloy containing 7 wt.-% of Si is investigated by μm-resolved X-ray computed tomography (CT) using synchrotron radiation. The foam is fabricated employing a powder metallurgical route. The evolution of foam microstructure is characterized by studying a series of samples representing different stages of foam expansion obtained by interrupting the foaming process for each sample at different foaming times. The computer tomographic reconstruction provides a 3D image of the pore structure as well as the spatial distribution of blowing agent particles. A statistical evaluation allows to determine the size distribution of the blowing agent and of the pores at different foaming stages.

Synchrotron radiation computed laminography for polymer composite failure studies

Failures of laterally extended polymer composite panels are imaged using 3D computed laminography. The experimental parameters and capability of the method are studied.

Void space inside the developing seed of Brassica napus and the modelling of its function

The developing seed essentially relies on external oxygen to fuel aerobic respiration, but it is currently unknown how oxygen diffuses into and within the seed, which structural pathways are used and what finally limits gas exchange. By applying synchrotron X-ray computed tomography to developing oilseed rape seeds we uncovered void spaces, and analysed their three-dimensional assembly. Both the testa and the hypocotyl are well endowed with void space, but in the cotyledons, spaces were small and poorly inter-connected. In silico modelling revealed a three orders of magnitude range in oxygen diffusivity from tissue to tissue, and identified major barriers to gas exchange. The oxygen pool stored in the voids is consumed about once per minute. The function of the void space was related to the tissue-specific distribution of storage oils, storage protein and starch, as well as oxygen, water, sugars, amino acids and the level of respiratory activity, analysed using a combination of magnetic resonance imaging, specific oxygen sensors, laser micro-dissection, biochemical and histological methods. We conclude that the size and inter-connectivity of void spaces are major determinants of gas exchange potential, and locally affect the respiratory activity of a developing seed.

Three-dimensional pelvis and limb anatomy of the Cenomanian hind-limbed snake Eupodophis descouensi (Squamata, Ophidia) revealed by synchrotron-radiation computed laminography

ABSTRACT Cretaceous marine hind-limbed snakes are considered to be key fossils for understanding the origin and evolution of snakes. In view of the rarity of such fossils, performing new analyses on described specimens using emerging, cuttingedge techniques should bring important new insights on these forms. We investigated the three-dimensional morphology and inner architecture of the pelvic girdle and hind-limb bones of the type specimen of Eupodophis descouensi Rage and Escuillié, 2000, one of the three taxa for which at least one hind-limb is known, using synchrotron-radiation computed laminography (SRCL), a recently developed non-destructive technique that overcomes some of the limitations of synchrotron microtomography for flat, laterally extended objects. This experiment allowed a virtual exhumation of the second, hidden leg of the specimen. The morphology and proportions of the regressed pelvic and hind-limb bones of Eupodophis resemble those of the hind-limbed snakes Pachyrhachis and Haasiophis. As in Haasiophis, four tarsals are observed in each limb, but there are no traces of metatarsals or phalanges. Moreover, despite the presence of osteosclerosis and pachyostosis in the vertebrae and the ribs of Eupodophis, the inner structure of its limb bones is devoid of these osseous specializations and displays a microanatomical organization similar to that of extant terrestrial lizards. This suggests that limb regression in Eupodophis was not due to a qualitative alteration of growth but, more likely, to a local decrease in growth rate or shortening of growth duration.

A GPU-based architecture for real-time data assessment at synchrotron experiments

Current imaging experiments at synchrotron beam lines often lack a real-time data assessment. X-ray imaging cameras installed at synchrotron facilities like ANKA provide millions of pixels, each with a resolution of 12 bits or more, and take up to several thousand frames per second. A given experiment can produce data sets of multiple gigabytes in a few seconds. Up to now the data is stored in local memory, transferred to mass storage, and then processed and analyzed off-line. The data quality and thus the success of the experiment, can, therefore, only be judged with a substantial delay, which makes an immediate monitoring of the results impossible. To optimize the usage of the micro-tomography beam-line at ANKA we have ported the reconstruction software to modern graphic adapters which offer an enormous amount of calculation power. We were able to reduce the reconstruction time from multiple hours to just a few minutes with a sample dataset of 20 GB. Using the new reconstruction software it is possible to provide a near real-time visualization and significantly reduce the time needed for the first evaluation of the reconstructed sample. The main paradigm of our approach is 100% utilization of all system resources. The compute intensive parts are offloaded to the GPU. While the GPU is reconstructing one slice, the CPUs are used to prepare the next one. A special attention is devoted to minimize data transfers between the host and GPU memory and to execute I/O operations in parallel with the computations. It could be shown that for our application not the computational part but the data transfers are now limiting the speed of the reconstruction. Several changes in the architecture of the DAQ system are proposed to overcome this second bottleneck. The article will introduce the system architecture, describe the hardware platform in details, and analyze performance gains during the first half year of operation.