Matthew H. Pinkerton

Phytoplankton distributions around New Zealand derived from SeaWiFS remotely‐sensed ocean colour data

Abstract Ocean colour data from the NASA Sea‐viewing Wide Field‐of‐view Sensor (SeaWiFS) was used to estimate chlorophyll a concentration around New Zealand on a monthly basis between September 1997 and May 2000. The performance of the SeaWiFS chlorophyll a algorithm (OC4v4) was investigated by comparing in situ measurements of the underwater light field with measurements of phytoplankton pigment concentration by High Performance Liquid Chromatography. The algorithm performed well for chlorophyll a concentrations below 0.6 mg m‐3 but overestimated by a factor of two or more at higher concentrations. The average chlorophyll a concentration for New Zealand Exclusive Economic Zone was calculated as an indication of the overall productivity of the region and varied between 0.26 and 0.43 mg m‐3 with no obvious relationship to the Southern Oscillation Index. New Zealand northern subtropical and Tasman Sea waters had a classical cycle of spring and autumn chlorophyll blooms consistent with production being co‐limited by nitrate and light. Subantarctic waters had a low‐magnitude annual cycle of chlorophyll abundance that peaked in early autumn, consistent with production being predominantly limited by a combination of iron and light. Chlorophyll was generally highest in the Subtropical Front where subtropical and subantarctic waters mix. A series of persistent warm‐core eddies along New Zealands east coast was obvious in many images, manifest as regions of low chlorophyll concentration.

Validation of SeaWiFS data from around New Zealand

Abstract The near-surface concentration of chlorophyll- a ( C a ) was measured during 11 research voyages around New Zealand between 1998 and 2000. Over 400 measurements of spectral normalised water-leaving radiance were made using a high precision profiling spectroradiometer. The data were used to assess the quality of remotely sensed measurements of C a by the NASA ocean colour sensor, SeaWiFS, in New Zealand waters. The results in the open-ocean regions are consistent with a combination of negative biases in the C a algorithm of ca. 20% (some regional dependency), and positive biases due to under-estimation of water reflectance towards the blue end of the spectrum by SeaWiFS.

Diet and trophic niche of Antarctic silverfish Pleuragramma antarcticum in the Ross Sea, Antarctica

The diet of Antarctic silverfish Pleuragramma antarcticum was evaluated by examining stomach contents of specimens collected in the Ross Sea (71°-77° S; 165°-180° E) in January to March 2008. Pleuragramma antarcticum (50-236 mm standard length, L(S)) and prey items were analysed for stable-isotopic composition of carbon and nitrogen. According to index of relative importance (I(RI) ), which incorporates frequency of occurrence, mass and number of prey items, the most important prey items were copepods (81%I(RI) over all specimens), predominantly Metridia gerlachei and Paraeuchaeta sp., with krill and fishes having low I(RI) (2·2 and 5·6%I(RI) overall). According to mass of prey (M) in stomachs, however, fishes (P. antarcticum and myctophids) and krill dominated overall diet (48 and 22%M, respectively), with copepods being a relatively minor constituent of overall diet by mass (9·9%M). Piscivory by P. antarcticum occurred mainly in the extreme south-west of the region and near the continental slope. Krill identified to species level in P. antarcticum stomachs were predominantly Euphausia superba (14·1%M) with some Euphausia crystallophorias (4·8%M). Both DistLM modelling (PRIMER-permanova+) on stomach contents (by I(RI)) and stepwise generalized linear modelling on stable isotopes showed that L(S) and location were significant predictors of P. antarcticum diet. Postlarval P. antarcticum (50-89 mm L(S)) consumed exclusively copepods. Juvenile P. antarcticum (90-151 mm L(S)) consumed predominantly krill and copepods by mass (46 and 30%M, respectively). Small adult P. antarcticum (152-178 mm L(S)) consumed krill, fishes and copepods (37, 36 and 15%M, respectively). Large adult P. antarcticum (179-236 mm L(S)) consumed predominantly fishes and krill (55 and 17%M, respectively), especially in the north (near the Ross Sea slope) and in the SW Ross Sea. Amphipods were occasionally important prey items for P. antarcticum (western Ross Sea, 39%M). General concordance between stomach contents and trophic level of P. antarcticum and prey based on δ(15) N was demonstrated. Pleuragramma antarcticum trophic level was estimated as 3·7 (postlarval fish) and 4·1 (fish aged 3+ years).

Diet of Antarctic toothfish ( Dissostichus mawsoni ) from the continental slope and oceanic features of the Ross Sea region, Antarctica

Abstract The diet of Dissostichus mawsoni captured by bottom longline in the Ross Sea region was examined during 2003, 2005 and 2010. The diet of sub-adult toothfish was similar to adult toothfish, comprising mainly benthic fishes and cephalopods. Sub-adult toothfish ate a greater variety of smaller prey than adults, including smaller fish and prawns. Grenadiers (Macrourus spp.) were the most important fish and overall prey species. On the continental slope, icefish (Channichthyidae) and eel cods (Muraenolepididae) were also important fish prey, while Psychroteuthis glacialis was the most important cephalopod prey. On oceanic features, toothfish fed mainly on Macrourus spp. but also fed on Antimora rostrata, cephalopods and the occasional mesopelagic to epipelagic fish. Diet varied significantly with toothfish size and location on northern parts of the Mawson and Iselin banks of the Ross Sea continental slope. There was no significant temporal change in diet composition.

Latitudinal variation of demersal fish assemblages in the western Ross Sea

Abstract Demersal fishes were sampled using a large fish trawl during two surveys carried out in February and March 2004 and 2008 in the Ross Sea, and around seamounts and islands just to the north at 66°S. The distribution and abundance of 65 species collected in these surveys were examined to determine if demersal fish communities varied throughout the area, and what environmental factors might influence this. Species accumulation with sample frequency did not reach an asymptote, but the rate of new species was low suggesting data were adequate for describing the main components of the communities. Three broad assemblages were identified, in the southern Ross Sea (south of 74°S), central–northern Ross Sea (between latitudes 71°–74°S), and the seamounts further north (65°–68°S) where some species more typical of sub-Antarctic latitudes were observed. Multivariate analyses indicated that environmental factors of seafloor rugosity (roughness), temperature, depth, and current speed were the main variables determining patterns in demersal fish communities.

Diet and trophic niche of Macrourus spp. (Gadiformes, Macrouridae) in the Ross Sea region of the Southern Ocean

Both Macrourus caml and M. whitsoni are probably abundant and widespread in the Ross Sea region at depths between approximately 500 and 2100 m. We present the analysis of stomach contents (including regurgitated stomach contents) from an undifferentiated mixture of 33 specimens of these species (henceforth Macrourus spp.) in the Ross Sea region of the Southern Ocean. Samples of stomach contents were obtained from the Ross Sea slope (between about 71° and 73° S) and on the Scott Island and seamount chain. Overall, amphipods were the dominant prey found in Macrourus spp. stomachs with an index of relative importance (IRI) of 43%. About half the amphipods were Eurythenes gryllus and about half could not be identified. Based on stable isotope results, unidentified amphipods were probably herbivorous rather than carnivorous. Other important prey were copepods (especially for fish with total length less than 30 cm), krill (mainly Euphausia superba for larger fish) and fishes (Pleuragramma antarcticum and Gymnoscopelus opisthopterus). Minor prey found in stomachs included isopods, mysids, salps and polychaetes, with rocks and fragments of coral, echinoderm and shell also found. Stomach contents data provide evidence of both pelagic and benthic feeding. Carbon and nitrogen stable-isotope analysis of 161 Macrourus spp. muscle tissue samples from the Ross Sea slope, Admiralty and Scott seamounts and two parts of the Pacific-Antarctic fracture zone (near 65° S) are presented. Nitrogen isotope results (δ15N = 10.6 ± 1.0‰, mean ± SD) were generally consistent with stomach contents. Carbon isotope results (δ13C = −24.7 ± 0.8‰) were consistent with Southern Ocean residence but higher than phytoplankton values (−29.9 ± 1.2‰). We found that Macrourus spp. in the Ross Sea region have a trophic level of 3.8 ± 0.3, placing them well below the top of the food chain. Trophic level of Macrourus spp. was significantly affected by location and by size of fish (especially for fish less than 30 cm), whereas sex, fatness and bottom depth were not significant.

Wind-driven upwelling and surface chlorophyll blooms in Greater Cook Strait

ABSTRACT We present the results of a combined observational and numerical study to investigate cool plumes of nutrient-rich upwelled water that emanate near the Kahurangi Shoals and extend into Greater Cook Strait. Surface temperature and chlorophyll are mapped using satellite observations to produce surface climatologies, to validate a numerical simulation and to show the utility of using spatial temperature differences as a measure of upwelling. We find upwelling near the Kahurangi Shoals is strongly wind-driven in the weather band. Upwelling occurs at all times of the year, but its surface signature is only visible in summer months. The upwelled nutrient-rich water supports increased primary production compared to surrounding waters, particularly in summer when the water column is more stratified and surrounding surface waters are presumably nutrient depleted.

Validation of ocean color remote sensing data using a moored data buoy

NASAs Sea-Viewing Wide Field-of-View Sensor (SeaWiFS) aims to measure global ocean color from space to within 5% to provide insights into fundamental ocean processes. SeaWiFS must be backed by comprehensive calibration and validation programs if the mission is to achieve this. In situ measurements of normalized water-leaving radiance (Lwn) made simultaneously with satellite measurements can complement on- orbit methods of tracking changes in the calibration of the satellite radiometer and allow end-to-end vicarious validation of the remotely-sensed data. A moored optical databuoy was developed at Plymouth Marine Laboratory, UK to measure Lwn in the western English Channel. Tests indicate that the buoy is capable of measuring spectral incident irradiance with less than 10% error and water-leaving radiance with less than 20% error; these errors are reduced by averaging and show no bias. There were 24 match-ups with good quality SeaWiFS data at the buoy site during the 10 months of deployment within the period May 1997 and September 1998. The differences between the buoy and SeaWiFS measurements of Lwn were found to be variable and often large. The root-mean-square (RMS) differences varied from 102% at 412 nm to 50% at 555 nm. The RMS differences in measurements of Lwn could be reduced to less than 18% by a combination of increasing the calibration coefficients of SeaWiFS by between 0.2 and 4.3% in the visible bands and by tuning the extrapolation of aerosol radiances from the near infra red to the visible wavelengths. These results imply that the monitoring of the absolute calibration of the SeaWiFS bands is imperfect and errors remain in the extrapolation of aerosol radiances for atmospheric correction.

Diet and Trophic Ecology of Adult Antarctic Silverfish ( Pleuragramma antarctica )

Antarctic silverfish, Pleuragramma antarctica Boulenger 1902 are the most abundant pelagic fish over the high-Antarctic shelf and one of the main ecosystem links in Southern Ocean shelf ecosystems, where they are a key prey item for fish marine mammals and birds. Consequently, information on the feeding ecology of silverfish forms an important component of research to understand the structure of Antarctic shelf ecosystems.