Mongkol Sukwattanasinitt

Enzymatic production of N-acetyl-D-glucosamine from chitin. Degradation study of N-acetylchitooligosaccharide and the effect of mixing of crude enzymes

N-Acetyl-D-glucosamine (GlcNAc) was produced from chitin by use of crude enzyme preparations. The efficient production of GlcNAc by cellulases derived from Trichoderma viride (T) and Acremonium cellulolyticus (A) was observed by HPLC analysis compared to lipase, hemicellulase, and pectinase. b-Chitin showed higher degradability than a-chitin when using cellulase T. The optimum pH of cellulase T was 4.0 on the hydrolysis of b-chitin. The yield of GlcNAc was enhanced by mixing of cellulase T and A. q 2003 Elsevier Science Ltd. All rights reserved.

Polydiacetylene paper-based colorimetric sensor array for vapor phase detection and identification of volatile organic compounds

Detection and identification of VOCs in their vapor phase is essential for safety and quality assessment. In this work, a novel platform of a paper-based polydiacetylene (PDA) colorimetric sensor array is prepared from eight diacetylene monomers, six of which are amphiphilic and the other two are bolaamphiphilic. To fabricate the sensors, monomers are coated onto a filter paper surface using the drop-casting technique and converted to PDAs by UV irradiation. The PDA sensors show solvent induced irreversible color transition upon exposure to VOC vapors. When combined into a sensing array, the color change pattern as measured by RGB values and statistically analyzed by principal component analysis (PCA) is capable of distinguishing 18 distinct VOCs in the vapor phase. The PCA score and loading plots also allow the reduction of the sensing elements in the array from eight to three PDAs that are capable of classifying 18 VOCs. Utilizing an array containing only two PDAs, various types of automotive fuels including gasoline, gasohol and diesel are successfully classified.

Roles of head group architecture and side chain length on colorimetric response of polydiacetylene vesicles to temperature, ethanol and pH.

In this contribution, we report the relationship between molecular structures of polydiacetylene (PDA) vesicles, fabricated by using three monomers, 10,12-tricosadiynoic acid (TCDA), 10,12-pentacosadiynoic acid (PCDA) and N-(2-aminoethyl)pentacosa-10,12-diynamide (AEPCDA), and their color-transition behaviors. The modification of side chain length and head group of the PDA vesicles strongly affects the colorimetric response to temperature, ethanol and pH. A shorter side chain of poly(TCDA) yields weaker inter- and intra-chain dispersion interactions in the bilayers compared to the system of poly(PCDA), which in turn results in a faster color transition upon exposure to all stimuli. A change of head group in poly(AEPCDA) slightly reduces the transition temperature. Interestingly, the colorimetric response of poly(AEPCDA) vesicles to the addition of ethanol is found to occur in a two-step fashion while the response of poly(PCDA) vesicles takes place in a one-step process. The amount of ethanol required for inducing complete color-transition of poly(AEPCDA) vesicles is also much higher, about 87% v/v. The increase of pH to ~9 and ~10 causes a color-transition of poly(TCDA) and poly(PCDA) vesicles, respectively. The poly(AEPCDA) vesicles, on the other hand, change color upon decreasing pH to ~0. The colorimetric response also occurs in a multi-step fashion. These discrepancies are attributed to the architecture of surface layers of poly(AEPCDA), constituting amine and amide groups separated by ethyl linkers.

Quantitative production of 2-acetamido-2-deoxy-D-glucose from crystalline chitin by bacterial chitinase.

Finely powdered alpha- and beta-chitin can be completely hydrolyzed with chitinase (EC 3.2.1.14) and beta-N-acetylhexosaminidase (EC 3.2.1.52) for the production of 2-acetamido-2-deoxy-D-glucose (GlcNAc). Crude chitinase from Burkholderia cepacia TU09 and Bacillus licheniformis SK-1 were used to digest alpha- and beta-chitin powder. Chitinase from B. cepacia TU09 produced GlcNAc in greater than 85% yield from beta- and alpha-chitin within 1 and 7 days, respectively. B. licheniformis SK-1 chitinase completely hydrolyzed beta-chitin within 6 days, giving a final GlcNAc yield of 75%, along with 20% of chitobiose. However, only a 41% yield of GlcNAc was achieved from digesting alpha-chitin with B. licheniformis SK-1 chitinase.

A polyanionic dendritic fluorophore for selective detection of Hg2+ in Triton X-100 aqueous media.

A series of water-soluble fluorescent dendritic compounds composed of phenylene-ethynylene repeating units and anionic carboxylate or cationic ammonium peripheral groups were synthesized. The first generation fluorescent dendrimer containing nine phenylene-ethynylene units and six carboxylate peripheral groups exhibited a highly selective fluorescence quenching by Hg(2+) ions. The Stern-Volmer constant (K(sv)) was 33,700 M(-1) in aqueous media in the presence of Triton X-100 surfactant.

Electronic absorption spectroscopy probed side-chain movement in chromic transitions of polydiacetylene vesicles.

Thermochromism, solvatochromism, and alkalinochromism of a poly-10,12-pentacosadiynoic acid (poly(PCDA)) vesicle solution are studied by electronic absorption spectroscopy. The spectroscopic profiles reveal different sequences of side-chain movement during the chromic transitions. The gradual hypsochromic shift and reversibility of the purple solution at low temperature in the thermochromic transition indicates that the transition starts with reversible conformational alteration of methylene side chains leading to metastable purple vesicles. Further heating to 80 degrees C or higher eventually causes the hydrogen bonds at the carboxylic head groups to break and turns the vesicle solution to red. The irreversibility of the red vesicles indicates that it is the most thermodynamically stable form. In the ethanolochromism and alkalinochromism, the processes are however induced at the vesicle-media interface, directly bringing about the hydrogen bond breaking. The purple solutions observed in the ethanolochromism and alkalinochromism cannot reverse back to the blue one. The absorption spectra clearly demonstrate that they are mixtures of the blue and red vesicles.

Protein discrimination by fluorescent sensor array constituted of variously charged dendritic phenylene–ethynylene fluorophores

A protein fluorescent sensor array based on variously charged dendritic fluorophores is developed. The variation of charge is achieved by different combinations of cationic trimethylammonium, anionic carboxylate and non-ionic methyl ester or N,N-dimethylamino on the peripheries of the fluorophores. Nine phenylene-ethynylene dendritic fluorophores, seven zeroth generation bearing charges varied from -3 to +3 and two first generation bearing -6 and +6 charges, are synthesized from triiodotriphenylamine through series of Sonogashira coupling. In phosphate buffer saline pH 7.4, five out of these nine compounds fluorogenically response to eight protein analytes distinctively. The data set of fluorescent intensities obtained from 5 fluorophores×8 proteins×9 replicated measurements can be statistically sorted into eight clusters corresponding to each protein by principal component analysis (PCA). Factorial discriminant analysis (FDA) cross-validation is applied to locate the optimum detection wavelength and reduce the number of sensing elements from nine to two with 100% discriminating accuracy. The method described should be generally practical for the development of electronic tongue for protein related food analysis and medical diagnosis.

Phenylene-ethynylene trication as an efficient fluorescent signal transducer in an aptasensor for potassium ion.

A tricationic phenylene-ethynylene (N(3+)) fluorophore is investigated as a fluorescent transducer in homogeneous aptasensing system for potassium ion (K(+)) assay in aqueous media. The enhancement of the fluorescent signal of N(3+) by three K(+) aptamers consisting of 12, 15, and 21 nucleotides are observed and used for the determination of N(3+)-aptamer binding affinities. The binding affinities increase with the length of the aptameric oligonucleotides and are proven to be important to the sensitivity and selectivity of the aptasensors. The enhanced fluorescent signal of each N(3+)-aptamer solution is selectively quenched by K(+) due to the ability of K(+) in stabilizing the G-quadruplex structure of the aptamer. Among three aptamers, the 15-base aptamer provides optimal sensitivity and selectivity over other ions such as Li(+), Na(+), NH(4)(+), Mg(2+), Ca(2+) and Sr(2+). The sensing system shows the detection limit of 1 μM of K(+) in clean buffered solution and 30 μM of K(+) in the solution containing 4800-fold excess of Na(+), with wide linear dynamic ranges of micro- to millimolar concentration. This label-free fluorescence aptasensor is conveniently and effectively applicable for analysis of K(+) in urine samples.

Aqueous sols of oligo(ethylene glycol) surface decorated polydiacetylene vesicles for colorimetric detection of Pb2

A series of ethylene glycol (EG), triethylene glycol (3EG) and pentaethylene glycol (5EG) esters of 10,12-pentacosadiynoic acid (PCDA) are synthesized. The glycol ester lipids can be hydrated and well dispersed in water but they cannot form polydiacetylenes upon UV irradiation. They however can be mixed with PCDA up to 30 mol% and polymerized to form blue sols. The mixed polydiacetylene sols show blue to red thermochromic transition with two-stepped transition temperatures. The first transition temperature decreases with the increase of the glycol ester content as well as the length of their chains indicating greater fluidity of the self-assembled structure due to less collaborative hydrogen bonding among the lipid head groups. These mixed polydiacetylene sol prepared from 30 mol% of the penta(ethylene glycol) ester show linear colorimetric response selectively to Pb(2+) in the range of 5-30 μM.

Solvent colorimetric paper-based polydiacetylene sensors from diacetylene lipids.

A well known unique property of polydiacetylenes (PDAs) is the colorimetric response to external stimuli making it one of the most studied conjugated polymers for sensing applications. Here we report the synthesis of a novel series of diacetylene acids from the condensation of pentacosa-10,12-diynylamine (PCDAmine) and dicarboxylic acid or its anhydrides. One of these diacetylene lipids, 4-(pentacosa-10,12-diynylamino)-4-oxobutanoic acid (PCDAS), is used in combination with pentacosa-10,12-diynoic acid (PCDA) for dropcasting on pieces of filter paper which are consequently irradiated by UV light to generate a paper based sensor array for solvent detection and identification. Upon the exposure to various types of organic solvents, the blue colored sensors colorimetrically respond to give different shades of colors between blue to red. The color patterns of the sensor array are recorded as RedGreenBlue (RGB) values and statistically analyzed by principal component analysis (PCA). The PCA score plot reveals that the array is capable of identifying eleven common organic solvents.