Naoyuki Yonemura
Sewanee: The University of the South
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Featured researches published by Naoyuki Yonemura.
Journal of Molecular Evolution | 2006
Naoyuki Yonemura; František Sehnal
The silk of caterpillars is secreted in the labial glands, stored as a gel in their lumen, and converted into a solid filament during spinning. Heavy chain fibroin (H-fibroin), light chain fibroin (L-fibroin), and P25 protein constitute the filament core in a few species that have been analyzed. Identification of these proteins in Yponomeuta evonymella, a moth from a family which diverged from the rest of Lepidoptera about 150 million years ago, reveals that the mode of filament construction is highly conserved. It is proposed that association of the three proteins is suited for long storage of hydrated silk dope and its rapid conversion to filament. Interactions underlying these processes depend on conserved spacing of critical amino acid residues that are dispersed through the L-fibroin and P25 and assembled in the short ends of the H-fibroin molecule. Strength, elasticity, and other physical properties of the filament are determined by simple amino acid motifs arranged in repetitive modules that build up most of the H-fibroin. H-Fibroin synergy with L-fibroin and P25 does not interfere with motif diversification by which the filament acquires new properties. Several types of motifs in complex repeats occur in the silks used for larval cobwebs and pupal cocoons. Restriction of silk use to cocoon construction in some lepidopteran families has been accompanied by simplification of H-fibroin repeats. An extreme deviation of the silk structure occurs in the Saturniidae silkmoths, which possess modified H-fibroin and lack L-fibroin and P25.
Journal of Molecular Evolution | 2009
Naoyuki Yonemura; Kazuei Mita; Toshiki Tamura; František Sehnal
Larvae of the sister orders Trichoptera and Lepidoptera are characterized by silk secretion from a pair of labial glands. In both orders the silk filament consists of heavy (H)- and light (L)-chain fibroins and in Lepidoptera it also includes a P25 glycoprotein. The L-fibroin and H-fibroin genes of Rhyacophila obliterata and Hydropsyche angustipennis caddisflies have exon/intron structuring (seven exons in L-fibroin and two in H-fibroin) similar to that in their counterparts in Lepidoptera. Fibroin cDNAs are also known in Limnephilus decipiens, representing the third caddisfly suborder. Amino acid sequences of deduced L-fibroin proteins and of the terminal H-fibroin regions are about 50% identical among the three caddisfly species but their similarity to lepidopteran fibroins is <25%. Positions of some residues are conserved, including cysteines that were shown to link the L-fibroin and H-fibroin by a disulfide bridge in Lepidoptera. The long internal part of H-fibroins is composed of short motifs arranged in species-specific repeats. They are extremely uniform in R. obliterata. Motifs (SX)n, GGX, and GPGXX occur in both Trichoptera and Lepidoptera. The trichopteran H-fibroins further contain charged amphiphilic motifs but lack the strings of alanines or alanine-glycine dipeptides that are typical lepidopteran motifs. On the other hand, sequences composed of a motif similar to ERIVAPTVITR surrounded by the (SX)4-6 strings and modifications of the GRRGWGRRG motif occur in Trichoptera and not in Lepidoptera.
Applied Entomology and Zoology | 2013
Naoyuki Yonemura; Toshiki Tamura; Keiro Uchino; Isao Kobayashi; Ken ichiro Tatematsu; Tetsuya Iizuka; Takuya Tsubota; Hideki Sezutsu; Mayandi Muthulakshmi; Javaregowda Nagaraju; Takahiro Kusakabe
Transgenic silkworms can be useful for investigating the functions of genes in the post-genomic era. However, the common method of using a transposon as an insertion tool may result in the random integration of a foreign gene into the genome and suffer from a strong position effect. To overcome these problems, it is necessary to develop a site-specific integration system. It is known that phiC31 integrase has the capacity to mediate recombination between the target sequences attP and attB. To test the availability of site-specific integration in the silkworm, we first examined the efficiency of recombination between the target sites of the two plasmids in silkworm embryos and found that the frequency of recombination was very high. Then we constructed a host strain that possessed the target sequence attP using the common method. We injected the donor plasmid together with the phiC31 integrase mRNA into the embryos of the host strain and obtained positive lines. Structural analysis of the lines showed that site-specific integration occurred by recombination between the genomic attP site and the attB site of the donor plasmid. We can conclude from the results that phiC31 integrase has the ability to mediate the site-specific integration of transgenes into the silkworm chromosome.
Journal of Insect Physiology | 2015
Valeriya Zabelina; Keiro Uchino; Yuji Mochida; Naoyuki Yonemura; Vyacheslav Klymenko; Hideki Sezutsu; Toshiki Tamura; František Sehnal
For the functional analysis of insect genes as well as for the production of recombinant proteins for biomedical use, clonal transgenic silkworms are very useful. We examined if they could be produced in the parthenogenetic strain that had been maintained for more than 40years as a female line in which embryogenesis is induced with nearly 100% efficiency by a heat shock treatment of unfertilized eggs. All individuals have identical female genotype. Silkworm transgenesis requires injection of the DNA constructs into the non-diapausing eggs at the preblastodermal stage of embryogenesis. Since our parthenogenetic silkworms produce diapausing eggs, diapause programing was eliminated by incubating ovaries of the parthenogenetic strain in standard male larvae. Chorionated eggs were dissected from the implants, activated by the heat shock treatment and injected with the transgene construct. Several transgenic individuals occurred in the daughter generation. Southern blotting analysis of two randomly chosen transgenic lines VTG1 and VTG14 revealed multiple transgene insertions. Insertions found in the parental females were transferred to the next generation without any changes in their sites and copy numbers, suggesting that transgenic silkworms can be maintained as clonal strains with homozygous transgenes. Cryopreservation was developed for the storage of precious genotypes. As shown for the VTG1 and VTG14 lines, larval ovaries can be stored in DMSO at the temperature of liquid nitrogen, transferred to Graces medium during defrosting, and then implanted into larvae of either sex of the standard silkworm strains C146 and w1-pnd. Chorionated eggs, which developed in the implants, were dissected and activated by the heat shock to obtain females (nearly 100% efficiency) or by a cold shock to induce development to both sexes in 4% of the eggs. It was then possible to establish bisexual lines homozygous for the transgene.
Archive | 2014
Kenji Yukuhiro; Hideki Sezutsu; Naoyuki Yonemura
Lepidopteran insects produce and secrete silk proteins mainly for cocoon formation. The lepidopteran silks generally consist of several components. Fibroins are a major component of the silks. So far as we know, two different types of fibroins have been described for the silk fiber construction. One is known in the saturniid silkmoth, wherein only one component, fibroin, forms homodimers with a disulfide bond and representing a unit of silk fiber formation (Tamura T, Inoue H, Suzuki Y, Mol Gen Genet 206:189–195, 1987; Tanaka K, Mizuno S, Insect Biochem Mol Biol 31:665–677, 2001). The other mode of fiber construction is the fibroin complex that consists of three components, that is, the fibroin heavy chain (fhc; about 350 kDa), the fibroin light chain (flc; 26 kDa) and P25 (or fibrohexamerin) (about 30 kDa) (Tanaka K, Mori K, Mizuno S, Biochem (Tokyo) 114:1–4, 1993, Tanaka K, Inoue S, Mizuno S, Insect Biochem Mol Biol 29:269–276, 1999a). The representative of this mode is that of Bombyx mori.
Biomacromolecules | 2016
Michal Zurovec; Naoyuki Yonemura; Barbara Kludkiewicz; František Sehnal; Dalibor Kodrík; Ligia Cota Vieira; Lucie Kucerova; Hynek Strnad; Peter Konik; Hana Sehadova
The silks produced by caterpillars consist of fibroin proteins that form two core filaments, and sericin proteins that seal filaments into a fiber and conglutinate fibers in the cocoon. Sericin genes are well-known in Bombyx mori (Bombycidae) but have received little attention in other insects. This paper shows that Antheraea yamamai (Saturniidae) contains five sericin genes very different from the three sericin genes of B. mori. In spite of differences, all known sericins are characterized by short exons 1 and 2 (out of 3-12 exons), expression in the middle silk gland section, presence of repeats with high contents of Ser and charged amino acid residues, and secretion as a sticky silk component soluble in hot water. The B. mori sericins represent tentative phylogenetic lineages (I) BmSer1 and orthologs in Saturniidae, (II) BmSer2, and (III) BmSer3 and related sericins of Saturniidae and of the pyralid Galleria mellonella. The lineage (IV) seems to be limited to Saturniidae. Concerted evolution of the sericin genes was apparently associated with gene amplifications as well as gene loses. Differences in the silk fiber morphology indicate that the cocktail of sericins linking the filaments and coating the fiber is modified during spinning. Silks are composite biomaterials of conserved function in spite of great diversity of their composition.
Archive | 2016
Kenji Yukuhiro; Hideki Sezutsu; Takuya Tsubota; Yoko Takasu; Tsunenori Kameda; Naoyuki Yonemura
In this chapter, we extensively describe insect-secreting silk proteins. Silk proteins are produced in the labial glands (functioning as silk glands), from which they are then secreted, which is a characteristic feature of the orders Trichoptera, Lepidoptera, and some other Holometabola insects.We first describe lepidopteran silk formation and describe how the two types of fibroin (fibroin heavy chain: H-fibroin and fibroin light chain: L-fibroin) observed in non-saturniid moths, represented by Bombyx mori. Specifically, we present how the two types of fibroins, which are linked by disulfide bonds, and P25 or fibrohexamerin as a chaperone) contribute to silk fiber organization. Saturniidae moths, which produce only one type of fibroin, are also discussed here about their silk formation. Following the description of lepidopteran silk fiber proteins, we present recent progress in the study of sericin proteins of B. mori and other lepidopteran. Sericins wrap silk fibers to seal two silk filaments together like glue. We also present the differences in expression patterns and gene regulation observed in the silk glands of B. mori and Samia ricini. Then, we comprehensively summarize the features of hornet and trichopteran silks different from lepidopterans. According to the current understanding, these species produce no sericin-like proteins. The principal molecular structure of hornet silk is α-helices, frequently in a coiled-coil conformation, a molecular structure distinct from the β-sheet structures that dominate the silks of lepidopterans. Finally, we describe the present status of transgenic technology that is being used to modify fibroins in order to add features that are lacking in the host.
Biomacromolecules | 2006
Naoyuki Yonemura; František Sehnal; Kazuei Mita; Toshiki Tamura
Advanced Functional Materials | 2013
Tetsuya Iizuka; Hideki Sezutsu; Ken-ichiro Tatematsu; Isao Kobayashi; Naoyuki Yonemura; Keiro Uchino; Kenichi Nakajima; Katsura Kojima; Chiyuki Takabayashi; Hiroaki Machii; Katsushige Yamada; Hiroyuki Kurihara; Tetsuo Asakura; Yasumoto Nakazawa; Atsushi Miyawaki; Satoshi Karasawa; Hatsumi Kobayashi; Junji Yamaguchi; Nobuo Kuwabara; Takashi Nakamura; Kei Yoshii; Toshiki Tamura
Insect Biochemistry and Molecular Biology | 2012
Naoyuki Yonemura; František Sehnal; Peter Konik; Masahiro Ajimura; Toshiki Tamura; Kazuei Mita