Neil D. Perkins
University of Michigan
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Featured researches published by Neil D. Perkins.
The EMBO Journal | 1993
Neil D. Perkins; N L Edwards; Colin S. Duckett; Adam B. Agranoff; Roland M. Schmid; Gary J. Nabel
The human immunodeficiency virus (HIV‐1) long terminal repeat (LTR) contains two binding sites for NF‐kappa B in close proximity to three binding sites for the constitutive transcription factor, Sp1. Previously, stimulation of the HIV enhancer in response to mitogens has been attributed to the binding of NF‐kappa B to the viral enhancer. In this report, we show that the binding of NF‐kappa B is not by itself sufficient to induce HIV gene expression. Instead, a protein‐protein interaction must occur between NF‐kappa B and Sp1 bound to an adjacent site. Cooperativity both in DNA binding and in transcriptional activation of NF‐kappa B and Sp1 was confirmed by electrophoretic mobility shift gel analysis, DNase footprinting, chemical cross‐linking and transfection studies in vivo. With a heterologous promoter, we find that the interaction of NF‐kappa B with Sp1 is dependent on orientation and position, and is not observed with other elements, including GATA, CCAAT or octamer. An increase in the spacing between the kappa B and Sp1 elements virtually abolishes this functional interaction, which is not restored when these sites are brought back into the same helical position. Several other promoters regulated by NF‐kappa B also contain kappa B in proximity to Sp1 binding sites. These findings suggest that an interaction between NF‐kappa B and Sp1 is required for inducible HIV‐1 gene expression and may serve as a regulatory mechanism to activate specific viral and cellular genes.
Molecular and Cellular Biology | 1994
Neil D. Perkins; Adam B. Agranoff; E Pascal; Gary J. Nabel
Induction of human immunodeficiency virus type 1 (HIV-1) gene expression in stimulated T cells has been attributed to the activation of the transcription factor NF-kappa B. The twice-repeated kappa B sites within the HIV-1 long terminal repeat are in close proximity to three binding sites for Sp1. We have previously shown that a cooperative interaction of NF-kappa B with Sp1 is required for the efficient stimulation of HIV-1 transcription. In this report, we define the domains of each protein responsible for this effect. Although the transactivation domains seemed likely to mediate this interaction, we find, surprisingly, that this interaction occurs through the putative DNA-binding domains of both proteins. Sp1 specifically interacted with the amino-terminal region of RelA(p65). Similarly, RelA bound directly to the zinc finger region of Sp1. This interaction was specific and resulted in cooperative DNA binding to the kappa B and Sp1 sites in the HIV-1 long terminal repeat. Furthermore, the amino-terminal region of RelA did not associate with several other transcription factors, including MyoD, E12, or Kox15, another zinc finger protein. These findings suggest that the juxtaposition of DNA-binding sites promotes a specific protein interaction between the DNA-binding regions of these transcription factors. This interaction is required for HIV transcriptional activation and may provide a mechanism to allow for selective activation of kappa B-regulated genes.
Molecular and Cellular Biology | 1993
Colin S. Duckett; Neil D. Perkins; Timothy F. Kowalik; Roland M. Schmid; Eng Shang Huang; Albert S. Baldwin; Gary J. Nabel
Inducible expression of human immunodeficiency virus (HIV) is regulated by a cellular transcription factor, nuclear factor kappa B (NF-kappa B). NF-kappa B is composed of distinct subunits; five independent genes, NFKB1(p105), NFKB2(p100), RelA(p65), c-rel and relB, that encode related proteins that bind to kappa B DNA elements have been isolated. We have previously found that NFKB2(p49/p52) acts in concert with RelA(p65) to stimulate the HIV enhancer in Jurkat T-leukemia cells. Here we examine the biochemical basis for the transcriptional regulation of HIV by NFKB2. Using Scatchard analysis, we have determined the dissociation constants of homodimeric p49 and heterodimeric p49/p65 for binding to the HIV kappa B site. p49 has a approximately 18-fold-lower affinity for the HIV kappa B site (KD = 69.1 pM) than does the approximately 50-kDa protein NFKB1(p50) derived from p105 (KD = 3.9 pM). In contrast, the affinity of heterodimeric NFKB2(p49)/RelA(p65) for this site is approximately 6-fold higher (KD = 11.8 pM) than that of p49 alone. Consistent with these findings, in vitro transcription was stimulated 18-fold by the addition of preformed, heterodimeric NFKB2(p49)/RelA(p65) protein. Transcriptional activation of the HIV enhancer was also subject to regulation by recently cloned I kappa B-alpha(MAD-3). Recombinant I kappa B-alpha(MAD-3) inhibited the DNA binding activity of p65, p49/p65, and p50/p65 but stimulated the binding of NFKB2(p49) or NFKB1(p50). Functional activation of an HIV reporter plasmid by p49/p65 in transiently transfected Jurkat T-leukemia cells was also inhibited by coexpression of MAD-3. These data suggest that binding of the NFKB2 subunit to the HIV enhancer is facilitated by RelA(p65) and that this NFKB2(p49)/p65 heterodimeric complex mediates transcriptional activation which is subject to regulation by MAD-3.
Molecular and Cellular Biology | 1993
S L Eck; Neil D. Perkins; D P Carr; Gary J. Nabel
Adhesive interactions between cells are essential for the organization and function of differentiated tissues and organs and are mediated by inducible cell surface glycoproteins. In normal tissues, cell adhesion molecules contribute to immune regulation, inflammation, and embryogenesis. Additionally, they play an important role in a variety of pathogenic processes. Cell adhesion molecule expression can be induced by stimuli known to activate NF-kappa B, a ubiquitous transcription factor found in a variety of cell types. To investigate the role of NF-kappa B in cell adhesion molecule expression, we treated HL-60 cells with a double-stranded oligonucleotide which specifically inhibits NF-kappa B-mediated transcription. This treatment resulted in the inhibition of phorbol 12-myristate 13-acetate (PMA)-induced cellular adhesion, morphological changes, and the expression of leukocyte integrin CD11b. In a similar fashion, expression of intercellular adhesion molecule 1 on human endothelial cells induced by PMA was specifically inhibited by the NF-kappa B antagonist. We suggest that NF-kappa B activation is a necessary event for the PMA-induced differentiation of HL-60 cells and the expression of certain activation is a necessary event for the PMA-induced differentiation of HL-60 cells and the expression of certain adhesion molecules. Furthermore, the inhibition of transcription factor functions by this generally applicable mechanism can be used to define their role in cellular differentiation and function.
Genomics | 1992
Susanne Liptay; Roland M. Schmid; Neil D. Perkins; Paul S. Meltzer; Michael R. Altherr; John D. McPherson; John J. Wasmuth; Gary J. Nabel
The chromosomal locations of the human genes NFKB1 and NFKB2, which encode two alternative DNA binding subunits of the NF-kappa B complex, p105 and p49/p100, respectively, have been determined. p105 was assigned to 4q21.1-q24 and p49/p100 to chromosome 10 by Southern blot analysis of panels of human/Chinese hamster cell hybrids. The locations were confirmed by fluorescence in situ hybridization and mapped with greater resolution to 4q23 and 10q24, respectively. These results demonstrate that these members of the NF-kappa B family are unlinked. Interestingly, p49/p100 as well as p105 maps to regions associated with certain types of acute lymphoblastic leukemia.
Journal of Biological Chemistry | 1995
Colin S. Duckett; Neil D. Perkins; Kwanyee Leung; Adam B. Agranoff; Gary J. Nabel
Nuclear factor κB (NF-κB) is a pleiotropic transcription factor which regulates the expression of a large number of cellular and viral genes. Induction of NF-κB has been shown previously to occur during cell cycle transition from G0 to G1, but the relationship of cytokine induction of this transcription factor to cell cycling has not been directly addressed. Here we examine the induction of NF-κB in serum-deprived and cycling cells in response to tumor necrosis factor-α (TNF-α). In 3T3 fibroblasts deprived of serum, and in the temperature-sensitive G2 phase mutant carcinoma line FT210, we find that NF-κB DNA binding activity is rapidly induced upon addition of TNF-α. In addition, NF-κB induction in cycling cells occurs without a significant change in cell cycle distribution. These data reveal that NF-κB is rapidly induced by TNF-α in both proliferating and arrested cells and suggest that distinct activation pathways can lead to cell cycle-dependent or -independent induction of NF-κB.
Science | 1997
Neil D. Perkins; Lisa K. Felzien; Jonathan C. Betts; Kwanyee Leung; David Beach; Gary J. Nabel
Nature | 1991
Roland M. Schmid; Neil D. Perkins; Colin S. Duckett; Philip C. Andrews; Gary J. Nabel
Proceedings of the National Academy of Sciences of the United States of America | 1996
Zhi Yong Yang; Robert D. Simari; Neil D. Perkins; Hong San; David Gordon; Gary J. Nabel; Elizabeth G. Nabel
Proceedings of the National Academy of Sciences of the United States of America | 1992
Neil D. Perkins; Roland M. Schmid; Colin S. Duckett; Kwanyee Leung; Nancy R. Rice; Gary J. Nabel