Nichole K. Sather

Multiscale Analysis of Restoration Priorities for Marine Shoreline Planning

Planners are being called on to prioritize marine shorelines for conservation status and restoration action. This study documents an approach to determining the management strategy most likely to succeed based on current conditions at local and landscape scales. The conceptual framework based in restoration ecology pairs appropriate restoration strategies with sites based on the likelihood of producing long-term resilience given the condition of ecosystem structures and processes at three scales: the shorezone unit (site), the drift cell reach (nearshore marine landscape), and the watershed (terrestrial landscape). The analysis is structured by a conceptual ecosystem model that identifies anthropogenic impacts on targeted ecosystem functions. A scoring system, weighted by geomorphic class, is applied to available spatial data for indicators of stress and function using geographic information systems. This planning tool augments other approaches to prioritizing restoration, including historical conditions and change analysis and ecosystem valuation.

Ecology of Juvenile Salmon in Shallow Tidal Freshwater Habitats of the Lower Columbia River, 2007–2010

The TFM study was designed to investigate the ecology and early life history of juvenile salmonids within shallow (<5 m) tidal freshwater habitats of the LCRE. We started collecting field data in June 2007. Since then, monthly sampling has occurred in the vicinity of the Sandy River delta (rkm 192–208) and at other sites and times in lower river reaches of tidal freshwater (rkm 110 to 141). This report provides a comprehensive synthesis of data covering the field period from June 2007 through April 2010.

Ecology of Juvenile Salmonids in Shallow Tidal Freshwater Habitats in the Vicinity of the Sandy River Delta, Lower Columbia River, 2007 Annual Report.

The tidal freshwater monitoring (TFM) project reported herein is part of the research, monitoring, and evaluation effort developed by the Action Agencies (Bonneville Power Administration, the U.S. Army Corps of Engineers [USACE], and the U.S. Bureau of Reclamation) in response to obligations arising from the Endangered Species Act (ESA) as a result of operation of the Federal Columbia River Power System. The project is being performed under the auspices of the Northwest Power and Conservation Council’s Columbia Basin Fish and Wildlife Program (Project No. 2005-001-00). The research is a collaborative effort among the Pacific Northwest National Laboratory, the Oregon Department of Fish and Wildlife, the National Marine Fisheries Service, and the University of Washington.

Smolt Responses to Hydrodynamic Conditions in Forebay Flow Nets of Surface Flow Outlets, 2007

This study provides information on juvenile salmonid behaviors at McNary and The Dalles dams that can be used by the USACE, fisheries resource managers, and others to support decisions on long-term measures to enhance fish passage. We researched smolt movements and ambient hydrodynamic conditions using a new approach combining simultaneous acoustic Doppler current profiler (ADCP) and acoustic imaging device (AID) measurements at surface flow outlets (SFO) at McNary and The Dalles dams on the Columbia River during spring and summer 2007. Because swimming effort vectors could be computed from the simultaneous fish and flow data, fish behavior could be categorized as passive, swimming against the flow (positively rheotactic), and swimming with the flow (negatively rheotactic). We present bivariate relationships to provide insight into fish responses to particular hydraulic variables that engineers might consider during SFO design. The data indicate potential for this empirical approach of simultaneous water/fish measurements to lead to SFO design guidelines in the future.

Shallow Tidal Freshwater Habitats of the Columbia River: Spatial and Temporal Variability of Fish Communities and Density, Size, and Genetic Stock Composition of Juvenile Chinook Salmon

AbstractWe investigated the spatial and temporal variability of the fish community and the density, size, and genetic stock composition of juvenile Chinook Salmon Oncorhynchus tshawytscha in shallow tidal freshwater habitats of the Columbia River. We sought to address data gaps related to juvenile Chinook Salmon in this portion of the Columbia River and thereby inform habitat restoration efforts. We examined fish communities, juvenile salmon life history characteristics, and relationships between salmon density and habitat conditions by using beach seine data collected over a 63-month period (2007−2012) from two tidal freshwater areas: the Sandy River delta (river kilometer [rkm] 188–202) and the lower river reach (rkm 110–141). We found few differences in the fish community across the two study areas. Fish community patterns were largely attributable to seasonal changes as opposed to spatial gradients and habitat types. Juvenile Chinook Salmon were the most common salmon species in our catches; this spec...

Facilitation of the Estuary/Ocean Subgroup and the Expert Regional Technical Group, Fiscal Year 2013 Annual Report

This project covers facilitation of the Estuary/Ocean Subgroup (EOS) for federal research, monitoring, and evaluation (RME) and the Expert Regional Technical Group (ERTG) for estuary habitat restoration. The EOS is part of the research, monitoring, and evaluation effort that the Action Agencies (Bonneville Power Administration [BPA], U.S. Army Corps of Engineers [Corps], U.S. Bureau of Reclamation) developed in response to obligations arising from the Endangered Species Act as applied to operation of the Federal Columbia River Power System (FCRPS). The EOS is tasked by National Marine Fisheries Service (NMFS) and the Action Agencies (AAs) to design and coordinate implementation of the federal RME plan for the lower Columbia River and estuary, including the river’s plume in the ocean. Initiated in 2002, the EOS is composed of members from BPA, the Corps, NMFS, and Pacific Northwest National Laboratory’s (PNNL’s) Marine Sciences Laboratory, and other agencies as necessary.

The Oncor Geodatabase for the Columbia Estuary Ecosystem Restoration Program: Handbook of Data Reduction Procedures, Workbooks, and Exchange Templates

This Handbook of Data Reduction Procedures, Workbooks, and Exchange Templates is designed to support the Oncor geodatabase for the Columbia Estuary Ecosystem Restoration Program (CEERP). The following data categories are covered: water-surface elevation and temperature, sediment accretion rate, photo points, herbaceous wetland vegetation cover, tree plots and site summaries, fish catch and density, fish size, fish diet, fish prey, and Chinook salmon genetic stock identification. The handbook is intended for use by scientists collecting monitoring and research data for the CEERP. The ultimate goal of Oncor is to provide quality, easily accessible, geospatial data for synthesis and evaluation of the collective performance of CEERP ecosystem restoration actions at a program scale.

The Oncor Geodatabase for the Columbia Estuary Ecosystem Restoration Program: Annual Report, 2012

Pacific Northwest National Laboratory (PNNL) conducted this project for the U.S. Army Corps of Engineers, Portland District (Corps). The purpose of the project is to develop a geospatial, web-accessible database (called “Oncor”) for action effectiveness and related data from monitoring and research efforts for the Columbia Estuary Ecosystem Restoration Program (CEERP). The intent is for the Oncor database to enable synthesis and evaluation, the results of which can then be applied in subsequent CEERP decision-making. This is the first annual report in what is expected to be a 3- to 4-year project, which commenced on February 14, 2012.

Multi-Scale Action Effectiveness Research in the Lower Columbia River and Estuary, 2011 - FINAL ANNUAL REPORT

The study reported here was conducted by researchers at Pacific Northwest National Laboratory (PNNL), the Oregon Department of Fish and Wildlife (ODFW), the University of Washington (UW), and the National Marine Fisheries Service (NMFS) for the U.S. Army Corps of Engineers, Portland District (USACE). This research project was initiated in 2007 by the Bonneville Power Administration to investigate critical uncertainties regarding juvenile salmon ecology in shallow tidal freshwater habitats of the lower Columbia River. However, as part of the Washington Memorandum of Agreement, the project was transferred to the USACE in 2010. In transferring from BPA to the USACE, the focus of the tidal freshwater research project shifted from fundamental ecology toward the effectiveness of restoration in the Lower Columbia River and estuary (LCRE). The research is conducted within the Action Agencies Columbia Estuary Ecosystem Restoration Program (CEERP). Data reported herein spans the time period May 2010 to September 2011.

Ecology of Juvenile Salmon in Shallow Tidal Freshwater Habitats in the Vicinity of the Sandy River Delta, Lower Columbia River, 2008 Annual Report.

The tidal freshwater monitoring (TFM) project reported herein is part of the research, monitoring, and evaluation effort developed by the Action Agencies (Bonneville Power Administration, the U.S. Army Corps of Engineers [USACE], and the U.S. Bureau of Reclamation) in response to obligations arising from the Endangered Species Act (ESA) as a result of operation of the Federal Columbia River Power System. The project is being performed under the auspices of the Northwest Power and Conservation Councils Columbia Basin Fish and Wildlife Program (Project No. 2005-001-00). The research is a collaborative effort among the Pacific Northwest National Laboratory, the Oregon Department of Fish and Wildlife, the National Marine Fisheries Service, and the University of Washington. The overarching goal of the TFM project is to bridge the gap in knowledge between tidal freshwater habitats and the early life history attributes of migrating salmon. The research questions include: In what types of habitats within the tidal freshwater area of the Columbia River are juvenile salmon found, when are they present, and under what environmental conditions? What is the ecological contribution of shallow (0-5 m) tidal freshwater habitats to the recovery of ESA-listed salmon in the Columbia River basin? Field data collection for the TFM project commenced in June 2007 and since then has continued monthly at six to nine sites in the vicinity of the Sandy River delta (river kilometer 192-208). While this report includes summary data spanning the 19-month period of study from June 2007 through December 2008, it highlights sampling conducted during calendar year 2008. Detailed data for calendar year 2007 were reported previously. The 2008 research objectives were as follows: (1) Characterize the vegetation composition and percent cover, conventional water quality, water surface elevation, substrate composition, bathymetry, and beach slope at the study sites within the vicinity of the Sandy River delta. (2) Characterize the fish community and juvenile salmon migration, including species composition, length-frequency distribution, density (number/m{sup 2}), and temporal and spatial distributions in the vicinity of the Sandy River delta in the lower Columbia River and estuary (LCRE). (3) Determine the stock of origin for juvenile Chinook salmon (Oncorhynchus tshawytscha) captured at sampling sites through genetic identification. (4) Characterize the diets of juvenile Chinook and coho (O. kisutch) salmon captured within the study area. (5) Estimate run timing, residence times, and migration pathways for acoustic-tagged fish in the study area. (6) Conduct a baseline evaluation of the potential restoration to reconnect the old Sandy River channel with the delta. (7) Apply fish density data to initiate a design for a juvenile salmon monitoring program for beach habitats within the tidal freshwater segment of the LCRE (river kilometer 56-234).