Ottó Veisz

The Genetics of Winterhardiness in Barley: Perspectives from Genome-Wide Association Mapping

Winterhardiness is a complex trait that involves low temperature tolerance (LTT), vernalization sensitivity, and photoperiod sensitivity. Quantitative trait loci (QTL) for these traits were first identified using biparental mapping populations; candidate genes for all loci have since been identified and characterized. In this research we used a set of 148 accessions consisting of advanced breeding lines from the Oregon barley (Hordeum vulgare L. subsp vulgare) breeding program and selected cultivars that were extensively phenotyped and genotyped with single nucleotide polymorphisms. Using these data for genome‐wide association mapping we detected the same QTL and genes that have been systematically characterized using biparental populations over nearly two decades of intensive research. In this sample of germplasm, maximum LTT can be achieved with facultative growth habit, which can be predicted using a three‐locus haplotype involving FR‐H1, FR‐H2, and VRN‐H2. The FR‐H1 and FR‐H2 LTT QTL explained 25% of the phenotypic variation, offering the prospect that additional gains from selection can be achieved once favorable alleles are fixed at these loci.

Effect of short-term and long-term low temperature stress on polyamine biosynthesis in wheat genotypes with varying degrees of frost tolerance

Summary Two series of experiments were carried out to examine the short- and long-tetm effects of low temperature on polyamine biosynthesis in wheat. In the first series, studies were made on the polyamine accumulation in the leaves, crowns and roots of winter wheat varieties with varying degrees of frost toletance subjected to short-term low temperature stress (6h, -2 °C). A marked accumulation of Put was observed. Agm accumulation was also examined and found comparable to that of Put. This suggests that Agm, which is an intermediate product of Put synthesis only in higher plants, may play an important role during short-term cold treatment. The second series of experiments was aimed at discovering the effect of wheat chromosomes 5A and 7A, which contain major genes responsible for frost resistance, on the polyamine synthesis taking place in various parts of the seedlings during long periods of cold treatment, and especially on the alternative metabolic pathway present only in higher plants.

Effect of abscisic acid on the cold hardiness of wheat seedlings

Summary ABA treatment increased the frost resistance of the wheat varieties Cheyenne, Martonvasari 14 and Chinese Spring to different extents when they were grown without cold hardening. A % survival equivalent to that of the cold-hardened plants was achieved without hardening if the plants were treated with 20 mg/L ABA 3 or 6 days prior to freezing at −6 °C. The ABA content in the crown in terms of fresh weight was twice as high as in the leaves even before cold hardening, and this tendency was observed throughout. In both plant organs a fairly substantial accumulation of ABA occurred during the first 2 days of hardening, after which the concentration dropped, and remained at much the same value from the 5th to the 20th day. For both the leaves and the crown, the poorly frost resistant Chinese Spring exhibited the smallest increase in ABA content. Endogenous changes in ABA were only correlated to the hardening level during the initial stages of hardening and the quantity of endogenous ABA depended on the genetic background of the variety. These facts would appear to indicate that ABA plays a role in the initial stages of frost resistance development, after which its effect weakens.

Characterization of morphological variation and cold resistance in interspecific somatic hybrids between potato (Solanum tuberosum L.) and S. brevidens Phil.

SummarySomatic hybrids between Solanum tuberosum L. cv. Gracia (2n=4x=48) and Solanum brevidens Phil. (2n=2x=24) were produced via fusion of mesophyll protoplasts. Selection of the protoplast derived putative hybrid calli was based on their vigorous growth. Additive isozyme patterns and chromosome numbers as well as the expression of parental morphological characters have proved the hybrid origin of the selected regenerants. Extensive chromosome loss during the regeneration process resulted in aneuploid hybrids with high frequency. Genomic instability could not be detected in these plants during the period of vegetative propagation. Regenerants from hybrid tissues exhibited wide morphological variation especially in tuber formation. The detailed morphological analysis based on the use of multivariate method (principal component analysis, PCA) enabled to identify morphological groups among the hybrid clones. The positioning of hybrid clones in the PCA space could not be correlated with chromosome numbers. The genomic ratio represented by the tetraploid and diploid parents influenced the morphology of somatic hybrid population according to the applied analytical system. Two selected hybrid clones have exhibited an intermediate degree of frost tolerance compared to the parents, based on the recovery of plants from lower buds after freezing of potted plants.

The relationships of hardening period and the expression of frost resistance in chromosome substitution lines of wheat

SummaryThe highly frost resistant wheat variety Cheyenne (donor) and the poorly frost resistant variety Chinese Spring (recipient) were frozen at −9° C and −11° C at various stages of hardening, as were a number of substitution lines of these two varieties (CS/Ch 3A, CS/Ch 5A, CS/Ch 7A, CS/Ch 2B, CS/Ch 4B, CS/Ch 5B, CS/Ch 4D, CS/Ch 5D). Chromosomes 5A, 5B, 5D, 4B and 7A of Cheyenne increased the frost resistance of the recipient variety to varying extents. However, the frost resistance changed not only as a function of the different chromosomes, but also as a function of the duration of hardening, indicating that genes responsible for frost resistance are expressed differently during different phases of the hardening process.

Adaptation of barley to mild winters: A role for PPDH2

BackgroundUnderstanding the adaptation of cereals to environmental conditions is one of the key areas in which plant science can contribute to tackling challenges presented by climate change. Temperature and day length are the main environmental regulators of flowering and drivers of adaptation in temperate cereals. The major genes that control flowering time in barley in response to environmental cues are VRNH1, VRNH2, VRNH3, PPDH1, and PPDH2 (candidate gene HvFT3). These genes from the vernalization and photoperiod pathways show complex interactions to promote flowering that are still not understood fully. In particular, PPDH2 function is assumed to be limited to the ability of a short photoperiod to promote flowering. Evidence from the fields of biodiversity, ecogeography, agronomy, and molecular genetics was combined to obtain a more complete overview of the potential role of PPDH2 in environmental adaptation in barley.ResultsThe dominant PPDH2 allele is represented widely in spring barley cultivars but is found only occasionally in modern winter cultivars that have strong vernalization requirements. However, old landraces from the Iberian Peninsula, which also have a vernalization requirement, possess this allele at a much higher frequency than modern winter barley cultivars. Under field conditions in which the vernalization requirement of winter cultivars is not satisfied, the dominant PPDH2 allele promotes flowering, even under increasing photoperiods above 12 h. This hypothesis was supported by expression analysis of vernalization-responsive genotypes. When the dominant allele of PPDH2 was expressed, this was associated with enhanced levels of VRNH1 and VRNH3 expression. Expression of these two genes is needed for the induction of flowering. Therefore, both in the field and under controlled conditions, PPDH2 has an effect of promotion of flowering.ConclusionsThe dominant, ancestral, allele of PPDH2 is prevalent in southern European barley germplasm. The presence of the dominant allele is associated with early expression of VRNH1 and early flowering. We propose that PPDH2 promotes flowering of winter cultivars under all non-inductive conditions, i.e. under short days or long days in plants that have not satisfied their vernalization requirement. This mechanism is indicated to be a component of an adaptation syndrome of barley to Mediterranean conditions.

Effects of photo and thermo cycles on flowering time in barley: a genetical phenomics approach

The effects of synchronous photo (16 h daylength) and thermo (2 °C daily fluctuation) cycles on flowering time were compared with constant light and temperature treatments using two barley mapping populations derived from the facultative cultivar ‘Dicktoo’. The ‘Dicktoo’בMorex’ (spring) population (DM) segregates for functional differences in alleles of candidate genes for VRN-H1, VRN-H3, PPD-H1, and PPD-H2. The first two loci are associated with the vernalization response and the latter two with photoperiod sensitivity. The ‘Dicktoo’בKompolti korai’ (winter) population (DK) has a known functional polymorphism only at VRN-H2, a locus associated with vernalization sensitivity. Flowering time in both populations was accelerated when there was no fluctuating factor in the environment and was delayed to the greatest extent with the application of synchronous photo and thermo cycles. Alleles at VRN-H1, VRN-H2, PPD-H1, and PPD-H2—and their interactions—were found to be significant determinants of the increase/decrease in days to flower. Under synchronous photo and thermo cycles, plants with the Dicktoo (recessive) VRN-H1 allele flowered significantly later than those with the Kompolti korai (recessive) or Morex (dominant) VRN-H1 alleles. The Dicktoo VRN-H1 allele, together with the late-flowering allele at PPD-H1 and PPD-H2, led to the greatest delay. The application of synchronous photo and thermo cycles changed the epistatic interaction between VRN-H2 and VRN-H1: plants with Dicktoo type VRN-H1 flowered late, regardless of the allele phase at VRN-H2. Our results are novel in demonstrating the large effects of minor variations in environmental signals on flowering time: for example, a 2 °C thermo cycle caused a delay in flowering time of 70 d as compared to a constant temperature.

The quantitative response of wheat vernalization to environmental variables indicates that vernalization is not a response to cold temperature

The initiation of flowering is a crucial trait that allows temperate plants to flower in the favourable conditions of spring. The timing of flowering initiation is governed by two main mechanisms: vernalization that defines a plants requirement for a prolonged exposure to cold temperatures; and photoperiod sensitivity defining the need for long days to initiate floral transition. Genetic variability in both vernalization and photoperiod sensitivity largely explains the adaptability of cultivated crop plants such as bread wheat (Triticum aestivum L.) to a wide range of climatic conditions. The major genes controlling wheat vernalization (VRN1, VRN2, and VRN3) and photoperiod sensitivity (PPD1) have been identified, and knowledge of their interactions at the molecular level is growing. However, the quantitative effects of temperature and photoperiod on these genes remain poorly understood. Here it is shown that the distinction between the temperature effects on organ appearance rate and on vernalization sensu stricto is crucial for understanding the quantitative effects of the environmental signal on wheat flowering. By submitting near isogenic lines of wheat differing in their allelic composition at the VRN1 locus to various temperature and photoperiod treatments, it is shown that, at the whole-plant level, the vernalization process has a positive response to temperature with complex interactions with photoperiod. In addition, the phenotypic variation associated with the presence of different spring homoeoalleles of VRN1 is not induced by a residual vernalization requirement. The results demonstrate that a precise definition of vernalization is necessary to understand and model temperature and photoperiod effects on wheat flowering. It is suggested that this definition should be used as the basis for gene expression studies and assessment of functioning of the wheat flowering gene network, including an explicit account of the quantitative effect of environmental variables.

Effect of heat and drought stress on the structure and composition of arabinoxylan and β-glucan in wheat grain

The effects of heat (H), drought (D) and H+D (from 12th day after heading for 15 days) on the dietary fiber content and composition (arabinoxylan (AX) and β-glucan) of three winter wheat varieties (Plainsman V, Mv Magma and Fatima 2) were determined. Results showed that H and D stress decreased the TKW, the β-glucan contents of the seeds and the quantity of the DP3+DP4 units, while the protein and AX contents increased. The highest amounts of AX and proteins were in the H+D stressed samples with heat stress also increasing the water extractability (WE) of the AX. However, while the content of AX content was generally increased by all stresses, drought stress had negative effect on the AX content of the drought tolerant Plainsman V. Fatima 2 behaved similarly to Plainsman V as regards to its drought tolerance, but was very sensitive to heat stress, while Mv Magma was the most resistant to heat stress.

Identification, gene postulation and molecular tagging of a stripe rust resistance gene in synthetic wheat CI142

Stripe rust, caused by Puccinia striiformis f. sp. tritici (PST), is one of the most serious diseases of wheat ( Triticum aestivum L.) worldwide. Of 94 Triticum durum/Aegilops tauschii synthetic wheat accessions tested, CI142 (Garza/Boy// Ae. squarrosa 271) was found to be resistant to 6 Chinese PST races. The resistance to stripe rust in CI142 was proven to be controlled by a single dominant gene, tentatively designated YrC142 . Gene postulation showed that the pathogenic specificity of CI142 is different from 21 other lines possessing known resistance genes, such as Yr10, Yr15, Yr24 , and Yr26 , located on chromosome 1B. Bulked segregant analysis (BSA) and F 2 segregation analysis of the CI142/Mingxian 169 cross were used to analyse the SSR markers linked to YrC142 . Five SSR markers were found to be closely associated with YrC142 in the order Xwmc419-YrC142-Xgwm273, Xbarc187-Xgwm18-Xwmc626 , in which the relative genetic distances of these SSR loci to the gene YrC142 were 5.4, 0.8, 0.8, 1.0, and 2.4 cM...