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Dive into the research topics where P. Thomas Vernier is active.

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Featured researches published by P. Thomas Vernier.


Bioelectromagnetics | 2012

Nanosecond Electric Pulses Cause Mitochondrial Membrane Permeabilization in Jurkat Cells

Tina Batista Napotnik; Yu-Hsuan Wu; Martin A. Gundersen; Damijan Miklavčič; P. Thomas Vernier

Nanosecond, high-voltage electric pulses (nsEP) induce permeabilization of the plasma membrane and the membranes of cell organelles, leading to various responses in cells including cytochrome c release from mitochondria and caspase activation associated with apoptosis. We report here evidence for nsEP-induced permeabilization of mitochondrial membranes in living cells. Using three different methods with fluorescence indicators-rhodamine 123 (R123), tetramethyl rhodamine ethyl ester (TMRE), and cobalt-quenched calcein-we have shown that multiple nsEP (five pulses or more, 4u2009ns duration, 10u2009MV/m, 1u2009kHz repetition rate) cause an increase of the inner mitochondrial membrane permeability and an associated loss of mitochondrial membrane potential. These effects could be a consequence of nsEP permeabilization of the inner mitochondrial membrane or the activation of mitochondrial membrane permeability transition pores. Plasma membrane permeabilization (YO-PRO-1 influx) was detected in addition to mitochondrial membrane permeabilization.


Bioelectrochemistry | 2016

Effects of high voltage nanosecond electric pulses on eukaryotic cells (in vitro): A systematic review

Tina Batista Napotnik; Matej Reberšek; P. Thomas Vernier; Barbara Mali; Damijan Miklavčič

For this systematic review, 203 published reports on effects of electroporation using nanosecond high-voltage electric pulses (nsEP) on eukaryotic cells (human, animal, plant) in vitro were analyzed. A field synopsis summarizes current published data in the field with respect to publication year, cell types, exposure configuration, and pulse duration. Published data were analyzed for effects observed in eight main target areas (plasma membrane, intracellular, apoptosis, calcium level and distribution, survival, nucleus, mitochondria, stress) and an additional 107 detailed outcomes. We statistically analyzed effects of nsEP with respect to three pulse duration groups: A: 1-10ns, B: 11-100ns and C: 101-999ns. The analysis confirmed that the plasma membrane is more affected with longer pulses than with short pulses, seen best in uptake of dye molecules after applying single pulses. Additionally, we have reviewed measurements of nsEP and evaluations of the electric fields to which cells were exposed in these reports, and we provide recommendations for assessing nanosecond pulsed electric field effects in electroporation studies.


Biochimica et Biophysica Acta | 2015

Multiple nanosecond electric pulses increase the number but not the size of long-lived nanopores in the cell membrane

Andrei G. Pakhomov; Elena C. Gianulis; P. Thomas Vernier; Iurii Semenov; Shu Xiao; Olga N. Pakhomova

Exposure to intense, nanosecond-duration electric pulses (nsEP) opens small but long-lived pores in the plasma membrane. We quantified the cell uptake of two membrane integrity marker dyes, YO-PRO-1 (YP) and propidium (Pr) in order to test whether the pore size is affected by the number of nsEP. The fluorescence of the dyes was calibrated against their concentrations by confocal imaging of stained homogenates of the cells. The calibrations revealed a two-phase dependence of Pr emission on the concentration (with a slower rise at<4μM) and a linear dependence for YP. CHO cells were exposed to nsEP trains (1 to 100 pulses, 60ns, 13.2kV/cm, 10Hz) with Pr and YP in the medium, and the uptake of the dyes was monitored by time-lapse imaging for 3min. Even a single nsEP triggered a modest but detectable entry of both dyes, which increased linearly when more pulses were applied. The influx of Pr per pulse was constant and independent of the pulse number. The influx of YP per pulse was highest with 1- and 2-pulse exposures, decreasing to about twice the Pr level for trains from 5 to 100 pulses. The constant YP/Pr influx ratio for trains of 5 to 100 pulses suggests that increasing the number of pulses permeabilizes cells to a greater extent by increasing the pore number and not the pore diameter.


The Journal of Membrane Biology | 2014

Basic Features of a Cell Electroporation Model: Illustrative Behavior for Two Very Different Pulses

Reuben S. Son; Kyle C. Smith; Thiruvallur R. Gowrishankar; P. Thomas Vernier; James C. Weaver

Science increasingly involves complex modeling. Here we describe a model for cell electroporation in which membrane properties are dynamically modified by poration. Spatial scales range from cell membrane thickness (5xa0nm) to a typical mammalian cell radius (10xa0


Journal of Physical Chemistry B | 2013

Molecular Dynamics Simulations of Ion Conductance in Field-Stabilized Nanoscale Lipid Electropores

Ming-Chak Ho; Maura Casciola; Zachary A. Levine; P. Thomas Vernier


PLOS ONE | 2012

Electric Field-Driven Water Dipoles: Nanoscale Architecture of Electroporation

Mayya Tokman; Jane HyoJin Lee; Zachary A. Levine; Ming-Chak Ho; Michael E. Colvin; P. Thomas Vernier

upmu


PLOS ONE | 2015

Dose-dependent ATP depletion and cancer cell death following calcium electroporation, relative effect of calcium concentration and electric field strength.

Emilie Louise Hansen; Esin B. Sözer; Stefania Romeo; Stine Krog Frandsen; P. Thomas Vernier; Julie Gehl


The Journal of Membrane Biology | 2015

Picosecond and Terahertz Perturbation of Interfacial Water and Electropermeabilization of Biological Membranes

P. Thomas Vernier; Zachary A. Levine; Ming-Chak Ho; Shu Xiao; Iurii Semenov; Andrei G. Pakhomov

μm), and can be used with idealized and experimental pulse waveforms. The model consists of traditional passive components and additional active components representing nonequilibrium processes. Model responses include measurable quantities: transmembrane voltage, membrane electrical conductance, and solute transport rates and amounts for the representative “long” and “short” pulses. The long pulse—1.5 kV/cm, 100xa0


Scientific Reports | 2017

Quantitative Limits on Small Molecule Transport via the Electropermeome — Measuring and Modeling Single Nanosecond Perturbations

Esin B. Sözer; Zachary A. Levine; P. Thomas Vernier


Biochimica et Biophysica Acta | 2017

Frequency spectrum of induced transmembrane potential and permeabilization efficacy of bipolar electric pulses

Caterina Merla; Andrei G. Pakhomov; Iurii Semenov; P. Thomas Vernier

upmu

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Zachary A. Levine

University of Southern California

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Stefania Romeo

National Research Council

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Martin A. Gundersen

University of Southern California

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Ming-Chak Ho

University of Southern California

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