Network


Latest external collaboration on country level. Dive into details by clicking on the dots.

Hotspot


Dive into the research topics where Patrick D. Kumavor is active.

Publication


Featured researches published by Patrick D. Kumavor.


Biomedical Optics Express | 2011

Integrated optical coherence tomography, ultrasound and photoacoustic imaging for ovarian tissue characterization

Yi Yang; Xiang Li; Tianheng Wang; Patrick D. Kumavor; Andres Aguirre; Kirk Shung; Qifa Zhou; Melinda Sanders; Molly Brewer; Quing Zhu

Ovarian cancer has the lowest survival rate of the gynecologic cancers because it is predominantly diagnosed in Stages III or IV due to the lack of reliable symptoms, as well as the lack of efficacious screening techniques. Detection before the malignancy spreads or at the early stage would greatly improve the survival and benefit patient health. In this report, we present an integrated optical coherence tomography (OCT), ultrasound (US) and photoacoustic imaging (PAI) prototype endoscopy system for ovarian tissue characterization. The overall diameter of the prototype endoscope is 5 mm which is suitable for insertion through a standard 5-12.5mm endoscopic laparoscopic port during minimally invasive surgery. It consists of a ball-lensed OCT sample arm probe, a multimode fiber having the output end polished at 45 degree angle so as to deliver the light perpendicularly for PAI, and a high frequency ultrasound transducer with 35MHz center frequency. System characterizations of OCT, US and PAI are presented. In addition, results obtained from ex vivo porcine and human ovarian tissues are presented. The optical absorption contrast provided by PAI, the high resolution subsurface morphology provided by OCT, and the deeper tissue structure imaged by US demonstrate the synergy of the combined endoscopy and the superior performance of this hybrid device over each modality alone in ovarian tissue characterization.


Biomedical Optics Express | 2014

A low-cost photoacoustic microscopy system with a laser diode excitation

Tianheng Wang; Sreyankar Nandy; Hassan S. Salehi; Patrick D. Kumavor; Quing Zhu

Photoacoustic microscopy (PAM) is capable of mapping microvasculature networks in biological tissue and has demonstrated great potential for biomedical applications. However, the clinical application of the PAM system is limited due to the use of bulky and expensive pulsed laser sources. In this paper, a low-cost optical-resolution PAM system with a pulsed laser diode excitation has been introduced. The lateral resolution of this PAM system was estimated to be 7 µm by imaging a carbon fiber. The phantoms made of polyethylene tubes filled with blood and a mouse ear were imaged to demonstrate the feasibility of this PAM system for imaging biological tissues.


Journal of Biomedical Optics | 2013

Photoacoustic imaging enhanced by indocyanine green-conjugated single-wall carbon nanotubes

Saeid Zanganeh; Hai Li; Patrick D. Kumavor; Umar Alqasemi; Andres Aguirre; Innus Mohammad; Courtney Stanford; Michael B. Smith; Quing Zhu

Abstract. A photoacoustic contrast agent that is based on bis-carboxylic acid derivative of indocyanine green (ICG) covalently conjugated to single-wall carbon nanotubes (ICG/SWCNT) is presented. Covalently attaching ICG to the functionalized SWCNT provides a more robust system that delivers much more ICG to the tumor site. The detection sensitivity of the new contrast agent in a mouse tumor model is demonstrated in vivo by our custom-built photoacoustic imaging system. The summation of the photoacoustic tomography (PAT) beam envelope, referred to as the “PAT summation,” is used to demonstrate the postinjection light absorption of tumor areas in ICG- and ICG/SWCNT-injected mice. It is shown that ICG is able to provide 33% enhancement at approximately 20 min peak response time with reference to the preinjection PAT level, while ICG/SWCNT provides 128% enhancement at 80 min and even higher enhancement of 196% at the end point of experiments (120 min on average). Additionally, the ICG/SWCNT enhancement was mainly observed at the tumor periphery, which was confirmed by fluorescence images of the tumor samples. This feature is highly valuable in guiding surgeons to assess tumor boundaries and dimensions in vivo and to achieve clean tumor margins to improve surgical resection of tumors.


Biomedical Optics Express | 2013

Characterization of ovarian tissue based on quantitative analysis of photoacoustic microscopy images

Tianheng Wang; Yi Yang; Umar Alqasemi; Patrick D. Kumavor; Xiaohong Wang; Melinda Sanders; Molly Brewer; Quing Zhu

In this paper, human ovarian tissue with malignant and benign features was imaged ex vivo using an optical-resolution photoacoustic microscopy (OR-PAM) system. The feasibility of PAM to differentiate malignant from normal ovarian tissues was explored by comparing the PAM images morphologically. Based on the observed differences between PAM images of normal and malignant ovarian tissues in microvasculature features and distributions, seven features were quantitatively extracted from the PAM images, and a logistic model was used to classify ovaries as normal or malignant. 106 PAM images from 18 ovaries were studied. 57 images were used to train the seven-parameter logistic model, and a specificity of 92.1% and a sensitivity of 89.5% were achieved; 49 images were then tested, and a specificity of 81.3% and a sensitivity of 88.2% were achieved. These preliminary results demonstrate the feasibility of our PAM system in mapping microvasculature networks as well as characterizing the ovarian tissue, and could be extremely valuable in assisting surgeons for in vivo evaluation of ovarian tissue during minimally invasive surgery.


Journal of Biomedical Optics | 2011

Target detection and quantification using a hybrid hand-held diffuse optical tomography and photoacoustic tomography system.

Patrick D. Kumavor; Chen Xu; Andres Aguirre; John Gamelin; Yasaman Ardeshirpour; Behnoosh Tavakoli; Saeid Zanganeh; Umar Alqasemi; Yi Yang; Quing Zhu

We present a photoacoustic tomography-guided diffuse optical tomography approach using a hand-held probe for detection and characterization of deeply-seated targets embedded in a turbid medium. Diffuse optical tomography guided by coregistered ultrasound, MRI, and x ray has demonstrated a great clinical potential to overcome lesion location uncertainty and to improve light quantification accuracy. However, due to the different contrast mechanisms, some lesions may not be detectable by a nonoptical modality but yet have high optical contrast. Photoacoustic tomography utilizes a short-pulsed laser beam to diffusively penetrate into tissue. Upon absorption of the light by the target, photoacoustic waves are generated and used to reconstruct, at ultrasound resolution, the optical absorption distribution that reveals optical contrast. However, the robustness of optical property quantification of targets by photoacoustic tomography is complicated because of the wide range of ultrasound transducer sensitivity, the orientation and shape of the targets relative to the ultrasound array, and the uniformity of the laser beam. We show in this paper that the relative optical absorption map provided by photoacoustic tomography can potentially guide the diffuse optical tomography to accurately reconstruct target absorption maps.


Journal of Biophotonics | 2013

Co-registered pulse-echo/photoacoustic transvaginal probe for real time imaging of ovarian tissue.

Patrick D. Kumavor; Umar Alqasemi; Behnoosh Tavakoli; Hai Li; Yi Yang; Xiaoguang Sun; Edward Warych; Quing Zhu

We present the design and construction of a prototype imaging probe capable of co-registered pulse-echo ultrasound and photoacoustic (optoacoustic) imaging in real time. The probe consists of 36 fibers of 200 micron core diameter each that are distributed around a commercial transvaginal ultrasound transducer, and housed in a protective shield. Its performance was demonstrated by two sets of experiments. The first set involved imaging of blood flowing through a tube mimicking a blood vessel, the second set involved imaging of human ovaries ex vivo. The results suggest that the system along with the probe has great potential for imaging and characterizing of ovarian tissue in vivo.


Journal of Biomedical Optics | 2013

Indocyanine green enhanced co-registered diffuse optical tomography and photoacoustic tomography

Chen Xu; Patrick D. Kumavor; Umar Alqasemi; Hai Li; Yan Xu; Saeid Zanganeh; Quing Zhu

Abstract. To overcome the intensive light scattering in biological tissue, diffuse optical tomography (DOT) in the near-infrared range for breast lesion detection is usually combined with other imaging modalities, such as ultrasound, x-ray, and magnetic resonance imaging, to provide guidance. However, these guiding imaging modalities may depend on different contrast mechanisms compared to the optical contrast in the DOT. As a result, they cannot provide reliable guidance for DOT because some lesions may not be detectable by a nonoptical modality but may have a high optical contrast. An imaging modality that relies on optical contrast to provide guidance is desirable for DOT. We present a system that combines a frequency-domain DOT and real-time photoacoustic tomography (PAT) systems to detect and characterize deeply seated targets embedded in a turbid medium. To further improve the contrast, the exogenous contrast agent, indocyanine green (ICG), is used. Our experimental results show that the combined system can detect a tumor-mimicking phantom, which is immersed in intralipid solution with the concentrations ranging from 100 to 10 μM and with the dimensions of 0.8  cm×0.8  cm×0.6  cm, up to 2.5 cm in depth. Mice experiments also confirmed that the combined system can detect tumors and monitor the ICG uptake and washout in the tumor region. This method can potentially improve the accuracy to detect small breast lesions as well as lesions that are sensitive to background tissue changes, such as the lesions located just above the chest wall.


Journal of Biomedical Optics | 2012

Recognition algorithm for assisting ovarian cancer diagnosis from coregistered ultrasound and photoacoustic images: ex vivo study.

Umar Alqasemi; Patrick D. Kumavor; Andres Aguirre; Quing Zhu

Abstract. Unique features and the underlining hypotheses of how these features may relate to the tumor physiology in coregistered ultrasound and photoacoustic images of ex vivo ovarian tissue are introduced. The images were first compressed with wavelet transform. The mean Radon transform of photoacoustic images was then computed and fitted with a Gaussian function to find the centroid of a suspicious area for shift-invariant recognition process. Twenty-four features were extracted from a training set by several methods, including Fourier transform, image statistics, and different composite filters. The features were chosen from more than 400 training images obtained from 33 ex vivo ovaries of 24 patients, and used to train three classifiers, including generalized linear model, neural network, and support vector machine (SVM). The SVM achieved the best training performance and was able to exclusively separate cancerous from non-cancerous cases with 100% sensitivity and specificity. At the end, the classifiers were used to test 95 new images obtained from 37 ovaries of 20 additional patients. The SVM classifier achieved 76.92% sensitivity and 95.12% specificity. Furthermore, if we assume that recognizing one image as a cancer is sufficient to consider an ovary as malignant, the SVM classifier achieves 100% sensitivity and 87.88% specificity.


Journal of Lightwave Technology | 2006

Experimental multiuser quantum key distribution network using a wavelength-addressed bus architecture

Patrick D. Kumavor; Alan C. Beal; Eric Donkor; Bing C. Wang

A six-user quantum key distribution network implemented on a bus topology is experimentally demonstrated. The network employs the BB84 protocol to transmit cryptographic keys encoded unto the phase states of highly attenuated laser light to distances of up to 31 km in a standard telecommunication-grade fiber. Each user on the network is assigned a unique wavelength for communication with the network server at a time. The measured quantum bit error rate and sifted key rate compare favorably with theoretical results


Biomedical Optics Express | 2014

Design of miniaturized illumination for transvaginal co-registered photoacoustic and ultrasound imaging

Hassan S. Salehi; Tianheng Wang; Patrick D. Kumavor; Hai Li; Quing Zhu

A novel lens-array based illumination design for a compact co-registered photoacoustic/ultrasound transvaginal probe has been demonstrated. The lens array consists of four cylindrical lenses that couple the laser beams into four 1-mm-core multi-mode optical fibers with optical coupling efficiency of ~87%. The feasibility of our lens array was investigated by simulating the lenses and laser beam profiles using Zemax. The laser fluence on the tissue surface was experimentally measured and was below the American National Standards Institute (ANSI) safety limit. Spatial distribution of hemoglobin oxygen saturation (sO2) of a mouse tumor was obtained in vivo using photoacoustic measurements at multiple wavelengths. Furthermore, benign and malignant ovaries were imaged ex vivo and evaluated histologically. The co-registered images clearly showed different patterns of blood vasculature. These results highlight the clinical potential of our system for noninvasive photoacoustic and ultrasound imaging of ovarian tissue and cancer detection and diagnosis.

Collaboration


Dive into the Patrick D. Kumavor's collaboration.

Top Co-Authors

Avatar

Quing Zhu

University of Connecticut

View shared research outputs
Top Co-Authors

Avatar

Eric Donkor

University of Connecticut

View shared research outputs
Top Co-Authors

Avatar

Umar Alqasemi

University of Connecticut

View shared research outputs
Top Co-Authors

Avatar

Tianheng Wang

University of Connecticut

View shared research outputs
Top Co-Authors

Avatar

Hai Li

University of Connecticut

View shared research outputs
Top Co-Authors

Avatar

Andres Aguirre

University of Connecticut

View shared research outputs
Top Co-Authors

Avatar

Molly Brewer

University of Connecticut Health Center

View shared research outputs
Top Co-Authors

Avatar

Yi Yang

University of Connecticut

View shared research outputs
Top Co-Authors

Avatar

Chen Xu

University of Connecticut

View shared research outputs
Top Co-Authors

Avatar

Melinda Sanders

University of Connecticut Health Center

View shared research outputs
Researchain Logo
Decentralizing Knowledge