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Dive into the research topics where Paulo E. Arratia is active.

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Featured researches published by Paulo E. Arratia.


Biophysical Journal | 2009

Absence of filamin A prevents cells from responding to stiffness gradients on gels coated with collagen but not fibronectin.

Fitzroy J. Byfield; Qi Wen; Ilya Levental; Kerstin Nordstrom; Paulo E. Arratia; R. Tyler Miller; Paul A. Janmey

Cell types from many tissues respond to changes in substrate stiffness by actively remodeling their cytoskeletons to alter spread area or adhesion strength, and in some cases changing their own stiffness to match that of their substrate. These cell responses to substrate stiffness are linked to substrate-induced changes in the state, localization, and amount of numerous proteins, but detailed evidence for the requirement of specific proteins in these distinct forms of mechanical response are scarce. Here we use microfluidics techniques to produce gels with a gradient of stiffness to show the essential function of filamin A in cell responses to mechanical stimuli and dissociate cell spreading and stiffening by contrasting responses of a pair of human melanoma-derived cell lines that differ in expression of this actin cross-linking protein. M2 melanoma cells null for filamin A do not alter their adherent area in response to increased substrate stiffness when they link to the substrate only through collagen receptors, but change adherent area normally when bound through fibronectin receptors. In contrast, filamin A-replete A7 cells change adherent area on both substrates and respond more strongly to collagen I-coated gels than to fibronectin-coated gels. Strikingly, A7 cells alter their stiffness, as measured by atomic force microscopy, to match the elastic modulus of the substrate immediately adjacent to them on the gradient. M2 cells, in contrast, maintain a constant stiffness on all substrates that is as low as that of A7 cells on the softest gels examined (1000 Pa). Comparison of cell spreading and cell stiffening on the same gradient substrates shows that cell spreading is uncoupled from stiffening. At saturating collagen and fibronectin concentrations, adhesion of M2 cells is reduced compared to that of A7 cells to an extent approximately equal to the difference in adherent area. Filamin A appears to be essential for cell stiffening on collagen, but not for cell spreading on fibronectin. These results have implications for different models of cell protrusion and adhesion and identify a key role for filamin A in altering cellular stiffness that cannot be compensated for by other actin cross-linkers in vivo.


International Journal of Pharmaceutics | 2003

Sampling and characterization of pharmaceutical powders and granular blends

Fernando J. Muzzio; C.L Goodridge; Albert Alexander; Paulo E. Arratia; H Yang; Osama Sudah

We use a variety of experimental results to illustrate issues and challenges involved in the sampling and characterization of pharmaceutical mixtures. Accurate and reliable characterization of granular mixtures is hindered by both the complexity of granular systems and the lack of validated and reliable sampling technology and techniques. Both sampling tools and sampling protocols are critically important for accurate characterization. Using cohesive and free-flowing powders and four thief probe designs, we reveal a large potential for extremely misleading results as well as severe disturbance of the granular bed. We also discuss results from several experiments designed to test the validity of various sampling protocols by varying parameters such as sampling location and frequency of sampling. These experiments illustrate the importance of effective sampling procedures to achieve the best and most efficient results.


Physical Review Letters | 2011

Undulatory Swimming in Viscoelastic Fluids

Xiaoning Shen; Paulo E. Arratia

The effects of fluid elasticity on the swimming behavior of the nematode Caenorhabditis elegans are experimentally investigated by tracking the nematodes motion and measuring the corresponding velocity fields. We find that fluid elasticity hinders self-propulsion. Compared to Newtonian solutions, fluid elasticity leads to up to 35% slower propulsion. Furthermore, self-propulsion decreases as elastic stresses grow in magnitude in the fluid. This decrease in self-propulsion in viscoelastic fluids is related to the stretching of flexible molecules near hyperbolic points in the flow.


Physical Review Letters | 2010

Microfluidic Rheology of Soft Colloids above and below Jamming

Kerstin Nordstrom; Emilie Verneuil; Paulo E. Arratia; Anindita Basu; Zexin Zhang; Arjun G. Yodh; Jerry P. Gollub; Douglas J. Durian

The rheology near jamming of a suspension of soft colloidal spheres is studied using a custom microfluidic rheometer that provides the stress versus strain rate over many decades. We find non-Newtonian behavior below the jamming concentration and yield-stress behavior above it. The data may be collapsed onto two branches with critical scaling exponents that agree with expectations based on Hertzian contacts and viscous drag. These results support the conclusion that jamming is similar to a critical phase transition, but with interaction-dependent exponents.


Physical Review Letters | 2013

Rheology of human blood plasma: viscoelastic versus Newtonian behavior.

M. Brust; C. Schaefer; R. Doerr; Lichao Pan; M. Garcia; Paulo E. Arratia; Christian Wagner

We investigate the rheological characteristics of human blood plasma in shear and elongational flows. While we can confirm a Newtonian behavior in shear flow within experimental resolution, we find a viscoelastic behavior of blood plasma in the pure extensional flow of a capillary breakup rheometer. The influence of the viscoelasticity of blood plasma on capillary blood flow is tested in a microfluidic device with a contraction-expansion geometry. Differential pressure measurements revealed that the plasma has a pronounced flow resistance compared to that of pure water. Supplementary measurements indicate that the viscoelasticity of the plasma might even lead to viscoelastic instabilities under certain conditions. Our findings show that the viscoelastic properties of plasma should not be ignored in future studies on blood flow.


Physical Review E | 2008

Polymeric filament thinning and breakup in microchannels

Paulo E. Arratia; Jerry P. Gollub; Douglas J. Durian

The effects of elasticity on filament thinning and breakup are investigated in microchannel cross flow. When a viscous solution is stretched by an external immiscible fluid, a low 100 ppm polymer concentration strongly affects the breakup process, compared to the Newtonian case. Qualitatively, polymeric filaments show much slower evolution, and their morphology features multiple connected drops. Measurements of filament thickness show two main temporal regimes: flow- and capillary-driven. At early times both polymeric and Newtonian fluids are flow-driven, and filament thinning is exponential. At later times, Newtonian filament thinning crosses over to a capillary-driven regime, in which the decay is algebraic. By contrast, the polymeric fluid first crosses over to a second type of flow-driven behavior, in which viscoelastic stresses inside the filament become important and the decay is again exponential. Finally, the polymeric filament becomes capillary-driven at late times with algebraic decay. We show that the exponential flow thinning behavior allows a measurement of the extensional viscosities of both Newtonian and polymeric fluids.


Physical Review Letters | 2013

Nonlinear elastic instability in channel flows at low Reynolds numbers.

Lichao Pan; Alexander Morozov; Christian Wagner; Paulo E. Arratia

It is presently believed that flows of viscoelastic polymer solutions in geometries such as a straight pipe or channel are linearly stable. Here we present experimental evidence that such flows can be nonlinearly unstable and can exhibit a subcritical bifurcation. Velocimetry measurements are performed in a long, straight microchannel; flow disturbances are introduced at the entrance of the channel system by placing a variable number of obstacles. Above a critical flow rate and a critical size of the perturbation, a sudden onset of large velocity fluctuations indicates the presence of a nonlinear subcritical instability. Together with the previous observations of hydrodynamic instabilities in curved geometries, our results suggest that any flow of polymer solutions becomes unstable at sufficiently high flow rates.


Physics of Fluids | 2010

Propulsive force measurements and flow behavior of undulatory swimmers at low Reynolds number

Josué Sznitman; Xiaoning Shen; Raphael Sznitman; Paulo E. Arratia

The swimming behavior of the nematode Caenorhabditis elegans is investigated in aqueous solutions of increasing viscosity. Detailed flow dynamics associated with the nematode’s swimming motion as well as propulsive force and power are obtained using particle tracking and velocimetry methods. We find that C. elegans delivers propulsive thrusts on the order of a few nanonewtons. Such findings are supported by values obtained using resistive force theory; the ratio of normal to tangential drag coefficients is estimated to be approximately 1.4. Over the range of solutions investigated here, the flow properties remain largely independent of viscosity. Velocity magnitudes of the flow away from the nematode body decay rapidly within less than a body length and collapse onto a single master curve. Overall, our findings support that C. elegans is an attractive living model to study the coupling between small-scale propulsion and low Reynolds number hydrodynamics.


Drug Development and Industrial Pharmacy | 2003

A Homogeneity Study Using NIR Spectroscopy: Tracking Magnesium Stearate in Bohle Bin-Blender

Nhat-Hang P. Duong; Paulo E. Arratia; Fernando J. Muzzio; Andrew Lange; Joep Timmermans; Scott D. Reynolds

Abstract A method was developed for studying mixing of cohesive pharmaceutical mixtures. A combination of accurate sampling and NIR spectroscopic analysis was developed as a suitable method to determine homogenization of magnesium stearate as a function of blending variables. A typical pharmaceutical blend containing a ratio 35:64:1 lactose, avicel, and magnesium stearate was used as a model system. The method accounted for variability of the concentration of magnesium stearate as well as variability of the excipients. Levels of magnesium stearate as low as 0.05% could be resolved by the method, and showed a predicting confidence interval above 98%.


Physical Review Letters | 2014

Mechanical and Microscopic Properties of the Reversible Plastic Regime in a 2D Jammed Material

Nathan C. Keim; Paulo E. Arratia

At the microscopic level, plastic flow of a jammed, disordered material consists of a series of particle rearrangements that cannot be reversed by subsequent deformation. An infinitesimal deformation of the same material has no rearrangements. Yet between these limits, there may be a self-organized plastic regime with rearrangements, but with no net change upon reversing a deformation. We measure the oscillatory response of a jammed interfacial material, and directly observe rearrangements that couple to bulk stress and dissipate energy, but do not always give rise to global irreversibility.

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Nathan C. Keim

University of Pennsylvania

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Douglas J. Durian

University of Pennsylvania

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Josué Sznitman

Technion – Israel Institute of Technology

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David A. Gagnon

University of Pennsylvania

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Xiaoning Shen

University of Pennsylvania

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Alison Patteson

University of Pennsylvania

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Gabriel Juarez

University of Pennsylvania

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