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Nature | 2006

Strategies for mitigating an influenza pandemic

Neil M. Ferguson; Derek A. T. Cummings; Christophe Fraser; James Cajka; Philip C. Cooley; Donald S. Burke

Development of strategies for mitigating the severity of a new influenza pandemic is now a top global public health priority. Influenza prevention and containment strategies can be considered under the broad categories of antiviral, vaccine and non-pharmaceutical (case isolation, household quarantine, school or workplace closure, restrictions on travel) measures. Mathematical models are powerful tools for exploring this complex landscape of intervention strategies and quantifying the potential costs and benefits of different options. Here we use a large-scale epidemic simulation to examine intervention options should initial containment of a novel influenza outbreak fail, using Great Britain and the United States as examples. We find that border restrictions and/or internal travel restrictions are unlikely to delay spread by more than 2–3 weeks unless more than 99% effective. School closure during the peak of a pandemic can reduce peak attack rates by up to 40%, but has little impact on overall attack rates, whereas case isolation or household quarantine could have a significant impact, if feasible. Treatment of clinical cases can reduce transmission, but only if antivirals are given within a day of symptoms starting. Given enough drugs for 50% of the population, household-based prophylaxis coupled with reactive school closure could reduce clinical attack rates by 40–50%. More widespread prophylaxis would be even more logistically challenging but might reduce attack rates by over 75%. Vaccine stockpiled in advance of a pandemic could significantly reduce attack rates even if of low efficacy. Estimates of policy effectiveness will change if the characteristics of a future pandemic strain differ substantially from those seen in past pandemics.


Journal of Public Health Management and Practice | 2010

Simulating School Closure Strategies to Mitigate an Influenza Epidemic

Bruce Y. Lee; Shawn T. Brown; Philip C. Cooley; Maggie A. Potter; William D. Wheaton; Ronald E. Voorhees; Samuel Stebbins; John J. Grefenstette; Shanta M. Zimmer; Richard K. Zimmerman; Tina Marie Assi; Rachel R. Bailey; Diane K. Wagener; Donald S. Burke

BACKGROUND There remains substantial debate over the impact of school closure as a mitigation strategy during an influenza pandemic. The ongoing 2009 H1N1 influenza pandemic has provided an unparalleled opportunity to test interventions with the most up-to-date simulations. METHODS To assist the Allegheny County Health Department during the 2009 H1N1 influenza pandemic, the University of Pittsburgh Models of Infectious Disease Agents Study group employed an agent-based computer simulation model (ABM) of Allegheny County, Pennsylvania, to explore the effects of various school closure strategies on mitigating influenza epidemics of different reproductive rates (R0). RESULTS Entire school system closures were not more effective than individual school closures. Any type of school closure may need to be maintained throughout most of the epidemic (ie, at least 8 weeks) to have any significant effect on the overall serologic attack rate. In fact, relatively short school closures (ie, 2 weeks or less) may actually slightly increase the overall attack rate by returning susceptible students back into schools in the middle of the epidemic. Varying the illness threshold at which school closures are triggered did not seem to have substantial impact on the effectiveness of school closures, suggesting that short delays in closing schools should not cause concern. CONCLUSIONS School closures alone may not be able to quell an epidemic but, when maintained for at least 8 weeks, could delay the epidemic peak for up to a week, providing additional time to implement a second more effective intervention such as vaccination.


Vaccine | 2010

A computer simulation of vaccine prioritization, allocation, and rationing during the 2009 H1N1 influenza pandemic

Bruce Y. Lee; Shawn T. Brown; George W. Korch; Philip C. Cooley; Richard K. Zimmerman; William D. Wheaton; Shanta M. Zimmer; John J. Grefenstette; Rachel R. Bailey; Tina Marie Assi; Donald S. Burke

In the fall 2009, the University of Pittsburgh Models of Infectious Disease Agent Study (MIDAS) team employed an agent-based computer simulation model (ABM) of the greater Washington, DC, metropolitan region to assist the Office of the Assistant Secretary of Public Preparedness and Response, Department of Health and Human Services, to address several key questions regarding vaccine allocation during the 2009 H1N1 influenza pandemic, including comparing a vaccinating children (i.e., highest transmitters)-first policy versus the Advisory Committee on Immunization Practices (ACIP)-recommended vaccinating at-risk individuals-first policy. Our study supported adherence to the ACIP (instead of a children-first policy) prioritization recommendations for the H1N1 influenza vaccine when vaccine is in limited supply and that within the ACIP groups, children should receive highest priority.


BMC Public Health | 2011

Would school closure for the 2009 H1N1 influenza epidemic have been worth the cost?: a computational simulation of Pennsylvania

Shawn T. Brown; Julie H.Y. Tai; Rachel R. Bailey; Philip C. Cooley; William D. Wheaton; Margaret A. Potter; Ronald E. Voorhees; Megan LeJeune; John J. Grefenstette; Donald S. Burke; Sarah M. McGlone; Bruce Y. Lee

BackgroundDuring the 2009 H1N1 influenza epidemic, policy makers debated over whether, when, and how long to close schools. While closing schools could have reduced influenza transmission thereby preventing cases, deaths, and health care costs, it may also have incurred substantial costs from increased childcare needs and lost productivity by teachers and other school employees.MethodsA combination of agent-based and Monte Carlo economic simulation modeling was used to determine the cost-benefit of closing schools (vs. not closing schools) for different durations (range: 1 to 8 weeks) and symptomatic case incidence triggers (range: 1 to 30) for the state of Pennsylvania during the 2009 H1N1 epidemic. Different scenarios varied the basic reproductive rate (R0) from 1.2, 1.6, to 2.0 and used case-hospitalization and case-fatality rates from the 2009 epidemic. Additional analyses determined the cost per influenza case averted of implementing school closure.ResultsFor all scenarios explored, closing schools resulted in substantially higher net costs than not closing schools. For R0 = 1.2, 1.6, and 2.0 epidemics, closing schools for 8 weeks would have resulted in median net costs of


Computers in Human Behavior | 2001

Using touch screen audio-CASI to obtain data on sensitive topics:

Philip C. Cooley; Susan M. Rogers; Charles F. Turner; Alia Al-Tayyib; Gordon Willis; Laxminarayana Ganapathi

21.0 billion (95% Range:


Influenza and Other Respiratory Viruses | 2010

Protecting health care workers: a pandemic simulation based on Allegheny County

Philip C. Cooley; Bruce Y. Lee; Shawn T. Brown; James Cajka; Bernadette Chasteen; Laxminarayana Ganapathi; James H. Stark; William D. Wheaton; Diane K. Wagener; Donald S. Burke

8.0 -


Computers in Human Behavior | 2000

Automating telephone surveys: using T-ACASI to obtain data on sensitive topics

Philip C. Cooley; Heather Miller; James N. Gribble; Charles F. Turner

45.3 billion). The median cost per influenza case averted would have been


Health Affairs | 2011

The Benefits To All Of Ensuring Equal And Timely Access To Influenza Vaccines In Poor Communities

Bruce Y. Lee; Shawn T. Brown; Rachel R. Bailey; Richard K. Zimmerman; Margaret A. Potter; Sarah M. McGlone; Philip C. Cooley; John J. Grefenstette; Shanta M. Zimmer; William D. Wheaton; Sandra Crouse Quinn; Ronald E. Voorhees; Donald S. Burke

14,185 (


Journal of Urban Health-bulletin of The New York Academy of Medicine | 2011

The Role of Subway Travel in an Influenza Epidemic: A New York City Simulation

Philip C. Cooley; Shawn T. Brown; James Cajka; Bernadette M. Chasteen; Laxminarayana Ganapathi; John J. Grefenstette; Craig R. Hollingsworth; Bruce Y. Lee; Burton Levine; William D. Wheaton; Diane K. Wagener

5,423 -


Mathematical and Computer Modelling | 2008

Using influenza-like illness data to reconstruct an influenza outbreak

Philip C. Cooley; Laxminarayana Ganapathi; George S. Ghneim; Scott D. Holmberg; William D. Wheaton; Craig R. Hollingsworth

30,565) for R0 = 1.2,

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Shawn T. Brown

Pittsburgh Supercomputing Center

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Bruce Y. Lee

Johns Hopkins University

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