Rebecca A. Schaffner
University of Southern California
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Featured researches published by Rebecca A. Schaffner.
Applied and Environmental Microbiology | 2003
David A. Caron; Mark R. Dennett; Dawn M. Moran; Rebecca A. Schaffner; Darcy J. Lonsdale; Christopher J. Gobler; Robert Nuzzi; Tim I. McLean
ABSTRACT A method was developed for the rapid detection and enumeration of Aureococcus anophagefferens, the cause of harmful algal blooms called “brown tides” in estuaries of the Mid-Atlantic United States. The method employs a monoclonal antibody (MAb) and a colorimetric, enzyme-linked immunosorbent assay format. The MAb obtained exhibits high reactivity with A. anophagefferens and very low cross-reactivities with a phylogenetically diverse array of other protists and bacteria. Standard curves are constructed for each 96-well microtiter plate by using known amounts of a preserved culture of A. anophagefferens. This approach allows estimation of the abundance of the alga in natural samples. The MAb method was compared to an existing method that employs polyclonal antibodies and epifluorescence microscopy and to direct microscopic counts of A. anophagefferens in samples with high abundances of the alga. The MAb method provided increased quantitative accuracy and greatly reduced sample processing time. A spatial survey of several Long Island estuaries in May 2000 using this new approach documented a range of abundances of A. anophagefferens in these bays spanning nearly 3 orders of magnitude.
Applied and Environmental Microbiology | 2008
Beth Stauffer; Rebecca A. Schaffner; Catherine Wazniak; David A. Caron
ABSTRACT A new immunologically based flow cytometry (IFCM) technique was developed to enumerate Aureococcus anophagefferens, a small pelagophyte alga that is the cause of “brown tides” in bays and estuaries of the mid-Atlantic states along the U.S. coast. The method utilizes a monoclonal antibody conjugated to fluorescein isothiocyanate (FITC-MAb) to label the surface of A. anophagefferens cells which are then detected and enumerated by using a flow cytometer. Optimal conditions for FITC-MAb staining, including solution composition, incubation times, and FITC-MAb concentrations, were determined. The FITC-MAb method was tested for cross-reactivity with nontarget, similarly sized, photoautotrophic protists, and the method was compared to an enzyme-linked immunosorbent assay (ELISA) using the same MAb. Comparisons of the IFCM technique to traditional microscopy enumeration of cultures and spiked environmental samples showed consistent agreement over several orders of magnitude (r2 > 0.99). Comparisons of the IFCM and ELISA techniques for enumerating cells from a predation experiment showed a substantial overestimation (up to 10 times higher) of the ELISA in the presence of consumers of A. anophagefferens, presumably due to egested cell fragments that retained antigenicity, using the ELISA method, but were not characterized as whole algal cells by the IFCM method. Application of the IFCM method to environmental “brown-tide” samples taken from the coastal bays of Maryland demonstrated its efficacy in resolving A. anophagefferens abundance levels throughout the course of a bloom and over a large range of abundance values. IFCM counts of the brown-tide alga from natural samples were consistently lower than those obtained using the ELISA method and were equivalent to those of the polyclonal immunofluorescence microscopy technique, since both methods discriminate intact cells. Overall, the IFCM approach was an accurate and relatively simple technique for the rapid enumeration of A. anophagefferens in natural samples over a wide range of abundance values (103 to 106 cells ml−1).
Harmful Algae | 2007
Astrid Schnetzer; Peter E. Miller; Rebecca A. Schaffner; Beth Stauffer; Burton H. Jones; Stephen B. Weisberg; Paul M. DiGiacomo; William M. Berelson; David A. Caron
Marine Ecology Progress Series | 2004
Robert M. Cerrato; David A. Caron; Darcy J. Lonsdale; Julie M. Rose; Rebecca A. Schaffner
Nature Geoscience | 2009
Emily Sekula-Wood; Astrid Schnetzer; Claudia R. Benitez-Nelson; Clarissa Anderson; William M. Berelson; Mark A. Brzezinski; Justina M. Burns; David A. Caron; Ivona Cetinić; John L. Ferry; Elizabeth Fitzpatrick; Burton H. Jones; Peter E. Miller; Steve L. Morton; Rebecca A. Schaffner; David A. Siegel; Robert C. Thunell
Harmful Algae | 2004
David A. Caron; Christopher J. Gobler; Darcy J. Lonsdale; Robert M. Cerrato; Rebecca A. Schaffner; Julie M. Rose; Nathaniel J. Buck; Gordon T. Taylor; Katie Rose Boissonneault; Reyhan Mehran
Aquatic Biology | 2009
Darcy J. Lonsdale; Robert M. Cerrato; Robert Holland; Allison Mass; Lee Holt; Rebecca A. Schaffner; Jerónimo Pan; David A. Caron
Harmful Algae | 2004
Mary Downes Gastrich; Richard G. Lathrop; Scott Haag; Michael P. Weinstein; Michael Danko; David A. Caron; Rebecca A. Schaffner
Journal of Plankton Research | 2013
Astrid Schnetzer; Burton H. Jones; Rebecca A. Schaffner; Ivona Cetinić; Elizabeth Fitzpatrick; Peter E. Miller; Erica Seubert; David A. Caron
Estuarine Coastal and Shelf Science | 2007
Darcy J. Lonsdale; Robert M. Cerrato; David A. Caron; Rebecca A. Schaffner