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Trends in Biochemical Sciences | 1981

Architecture of scorpion neurotoxins: a class of membrane-binding proteins

Juan C. Fontecilla-Camps; Robert J. Almassy; Steven E. Ealick; F.L. Suddath; Dean D. Watt; Richard J. Feldmann; Charles E. Bugg

Abstract The three-dimensional structure of a scorpion neurotoxin has been determined from high-resolution crystallographic data. The protein possesses a large flattened surface that contains many of the conserved residues and a high concentration of hydrophobic residues. It is likely that other scorpion toxins have this same overall structure, and that they bind to excitable membranes through sites on the conserved-hydrophobic surface of the molecule.


Gene | 1986

Sequence of glutamine synthetase from Salmonella typhimurium and implications for the protein structure

Cheryl A. Janson; Paul S. Kayne; Robert J. Almassy; Michael Grunstein; David Eisenberg

To aid in the interpretation of the 3.5 A resolution electron density map of glutamine synthetase (GS) from Salmonella typhimurium, the nucleotide sequence of the gene coding for this enzyme has been determined. The predicted sequence of 468 amino acids (Mr = 51,628) has been compared to the sequence and sequence fragments reported by others for GS of Anabaena and Escherichia coli. The homology between the pairs of sequences is sufficiently strong to suggest that the overall three-dimensional structures of the three GS are similar. The predicted positions of alpha helices are in moderately good agreement with the electron-density map.


Journal of Protein Chemistry | 1992

Heterologous expression and purification of active human phosphoribosylglycinamide formyltransferase as a single domain

Chen-Chen Kan; Michael R. Gehring; Beverly R. Nodes; Cheryl A. Janson; Robert J. Almassy; Zuzana Hostomska

We report here for the first time that the GART domain of the human trifunctional enzyme possessing GARS, AIRS, and GART activities can be expressed independently inEscherichia coli at high levels as a stable protein with enzymatic characteristics comparable to those of native trifunctional protein. Human trifunctional enzyme is involved inde novo purine biosynthesis, and has long been recognized as a target for antineoplastic intervention. The GART domain was expressed inE. coli under the control of bacteriophage T7 promotor and isolated by a three-step chromatographic procedure. Two residues, Asp 951 and His 915, were shown to be catalytically crucial by site-directed mutagenesis and subsequent characterization of purified mutant proteins. The active monofunctional GART protein produced inE. coli can serve as a valuable substitute of trifunctional enzyme for structural and functional studies which have been until now hindered because of insufficient quantity, instability, and size of the trifunctional GART protein.


Archives of Biochemistry and Biophysics | 1984

Isolation and crystallization of unadenylylated glutamine synthetase from Salmonella typhimurium

Cheryl A. Janson; Robert J. Almassy; Edwin M. Westbrook; David Eisenberg

The enzyme glutamine synthetase (GS) has been isolated from a mutant strain of Salmonella typhimurium, constructed by Kustu, which lacks the enzymatic activity for adenylylation of glutamine synthetase. Thus the purified GS is uniformly unadenylylated, as confirmed by gel electrophoresis and enzyme assays. It crystallizes readily in many morphologies, at least six of which are distinct polymorphs. The most favorable crystal form for structural studies belongs to space group C2, with unit cell dimensions a = 235.5 A, b = 134.5 A, c = 200.1 A, beta = 102.8 degrees, and with one GS molecule per asymmetric unit. The crystals diffract to about 2.8 A resolution in rotation X-ray photographs and thus appear suitable for structural studies at moderate resolution. These crystals are isomorphous with crystalline GS from Escherichia coli in both adenylylated and unadenylylated states, suggesting that the enzymes from the two bacteria are similar molecules, and that adenylylation does not greatly affect the conformation of the molecule.


Nature | 1986

Novel subunit subunit interactions in the structure of glutamine synthetase

Robert J. Almassy; Cheryl A. Janson; R. Hamlin; N-H. Xuong; David Eisenberg


Journal of Biological Chemistry | 1989

Refined atomic model of glutamine synthetase at 3.5 A resolution.

M.M Yamashita; Robert J. Almassy; Cheryl A. Janson; Duilio Cascio; David Eisenberg


Proceedings of the National Academy of Sciences of the United States of America | 1980

Three-dimensional structure of a protein from scorpion venom: a new structural class of neurotoxins.

Juan C. Fontecilla-Camps; Robert J. Almassy; F L Suddath; D D Watt; Charles E. Bugg


Journal of Medicinal Chemistry | 2003

Structure-based design, synthesis, and antimicrobial activity of indazole-derived SAH/MTA nucleosidase inhibitors.

Xiaoming Li; Sam Chu; Victoria A. Feher; Mitra Khalili; Zhe Nie; Stephen Margosiak; Victor I. Nikulin; James Levin; Kelly G. Sprankle; Martina E. Tedder; Robert J. Almassy; Krzysztof Appelt; Kraig M. Yager


Proceedings of the National Academy of Sciences of the United States of America | 1992

Structures of apo and complexed Escherichia coli glycinamide ribonucleotide transformylase.

Robert J. Almassy; Cheryl A. Janson; Chen-Chen Kan; Zuzana Hostomska


Biochemistry | 1995

Structure-function analysis of the mammalian DNA polymerase beta active site: role of aspartic acid 256, arginine 254, and arginine 258 in nucleotidyl transfer.

Karen L. Menge; Zdenek Hostomsky; Beverly R. Nodes; Geoffrey O. Hudson; Soheil Rahmati; Ellen W. Moomaw; Robert J. Almassy; Zuzana Hostomska

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Charles E. Bugg

University of Alabama at Birmingham

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Juan C. Fontecilla-Camps

Centre national de la recherche scientifique

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Duilio Cascio

University of California

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F.L. Suddath

University of Alabama at Birmingham

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