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Dive into the research topics where Rui Carlos Sá is active.

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Featured researches published by Rui Carlos Sá.


Journal of Applied Physiology | 2010

Vertical distribution of specific ventilation in normal supine humans measured by oxygen-enhanced proton MRI.

Rui Carlos Sá; Matthew V. Cronin; A. Cortney Henderson; Sebastiaan Holverda; Rebecca J. Theilmann; Tatsuya J. Arai; David J. Dubowitz; Susan R. Hopkins; Richard B. Buxton; G. Kim Prisk

Specific ventilation (SV) is the ratio of fresh gas entering a lung region divided by its end-expiratory volume. To quantify the vertical (gravitationally dependent) gradient of SV in eight healthy supine subjects, we implemented a novel proton magnetic resonance imaging (MRI) method. Oxygen is used as a contrast agent, which in solution changes the longitudinal relaxation time (T1) in lung tissue. Thus alterations in the MR signal resulting from the regional rise in O(2) concentration following a sudden change in inspired O(2) reflect SV-lung units with higher SV reach a new equilibrium faster than those with lower SV. We acquired T1-weighted inversion recovery images of a sagittal slice of the supine right lung with a 1.5-T MRI system. Images were voluntarily respiratory gated at functional residual capacity; 20 images were acquired with the subject breathing air and 20 breathing 100% O(2), and this cycle was repeated five times. Expired tidal volume was measured simultaneously. The SV maps presented an average spatial fractal dimension of 1.13 ± 0.03. There was a vertical gradient in SV of 0.029 ± 0.012 cm(-1), with SV being highest in the dependent lung. Dividing the lung vertically into thirds showed a statistically significant difference in SV, with SV of 0.42 ± 0.14 (mean ± SD), 0.29 ± 0.10, and 0.24 ± 0.08 in the dependent, intermediate, and nondependent regions, respectively (all differences, P < 0.05). This vertical gradient in SV is consistent with the known gravitationally induced deformation of the lung resulting in greater lung expansion in the dependent lung with inspiration. This SV imaging technique can be used to quantify regional SV in the lung with proton MRI.


Journal of Applied Physiology | 2013

The gravitational distribution of ventilation-perfusion ratio is more uniform in prone than supine posture in the normal human lung

A. Cortney Henderson; Rui Carlos Sá; Rebecca J. Theilmann; Richard B. Buxton; G. Kim Prisk; Susan R. Hopkins

The gravitational gradient of intrapleural pressure is suggested to be less in prone posture than supine. Thus the gravitational distribution of ventilation is expected to be more uniform prone, potentially affecting regional ventilation-perfusion (Va/Q) ratio. Using a novel functional lung magnetic resonance imaging technique to measure regional Va/Q ratio, the gravitational gradients in proton density, ventilation, perfusion, and Va/Q ratio were measured in prone and supine posture. Data were acquired in seven healthy subjects in a single sagittal slice of the right lung at functional residual capacity. Regional specific ventilation images quantified using specific ventilation imaging and proton density images obtained using a fast gradient-echo sequence were registered and smoothed to calculate regional alveolar ventilation. Perfusion was measured using arterial spin labeling. Ventilation (ml·min(-1)·ml(-1)) images were combined on a voxel-by-voxel basis with smoothed perfusion (ml·min(-1)·ml(-1)) images to obtain regional Va/Q ratio. Data were averaged for voxels within 1-cm gravitational planes, starting from the most gravitationally dependent lung. The slope of the relationship between alveolar ventilation and vertical height was less prone than supine (-0.17 ± 0.10 ml·min(-1)·ml(-1)·cm(-1) supine, -0.040 ± 0.03 prone ml·min(-1)·ml(-1)·cm(-1), P = 0.02) as was the slope of the perfusion-height relationship (-0.14 ± 0.05 ml·min(-1)·ml(-1)·cm(-1) supine, -0.08 ± 0.09 prone ml·min(-1)·ml(-1)·cm(-1), P = 0.02). There was a significant gravitational gradient in Va/Q ratio in both postures (P < 0.05) that was less in prone (0.09 ± 0.08 cm(-1) supine, 0.04 ± 0.03 cm(-1) prone, P = 0.04). The gravitational gradients in ventilation, perfusion, and regional Va/Q ratio were greater supine than prone, suggesting an interplay between thoracic cavity configuration, airway and vascular tree anatomy, and the effects of gravity on Va/Q matching.


NMR in Biomedicine | 2014

Advances in functional and structural imaging of the human lung using proton MRI

G. Wilson Miller; John P. Mugler; Rui Carlos Sá; Talissa A. Altes; G. Kim Prisk; Susan R. Hopkins

The field of proton lung MRI is advancing on a variety of fronts. In the realm of functional imaging, it is now possible to use arterial spin labeling (ASL) and oxygen‐enhanced imaging techniques to quantify regional perfusion and ventilation, respectively, in standard units of measurement. By combining these techniques into a single scan, it is also possible to quantify the local ventilation–perfusion ratio, which is the most important determinant of gas‐exchange efficiency in the lung. To demonstrate potential for accurate and meaningful measurements of lung function, this technique was used to study gravitational gradients of ventilation, perfusion, and ventilation–perfusion ratio in healthy subjects, yielding quantitative results consistent with expected regional variations.


Journal of Applied Physiology | 2014

Validating the distribution of specific ventilation in healthy humans measured using proton MR imaging

Rui Carlos Sá; Amran K. Asadi; Rebecca J. Theilmann; Susan R. Hopkins; G. Kim Prisk; Chantal Darquenne

Specific ventilation imaging (SVI) uses proton MRI to quantitatively map the distribution of specific ventilation (SV) in the human lung, using inhaled oxygen as a contrast agent. To validate this recent technique, we compared the quantitative measures of heterogeneity of the SV distribution in a 15-mm sagittal slice of lung obtained in 10 healthy supine subjects, (age 37 ± 10 yr, forced expiratory volume in 1 s 97 ± 7% predicted) using SVI to those obtained in the whole lung from multiple-breath nitrogen washout (MBW). Using the analysis of Lewis et al. (Lewis SM, Evans JW, Jalowayski AA. J App Physiol 44: 416-423, 1978), the most likely distribution of SV from the MBW data was computed and compared with the distribution of SV obtained from SVI, after normalizing for the difference in tidal volume. The average SV was 0.30 ± 0.10 MBW, compared with 0.36 ± 0.10 SVI (P = 0.01). The width of the distribution, a measure of the heterogeneity, obtained using both methods was comparable: 0.51 ± 0.06 and 0.47 ± 0.08 in MBW and SVI, respectively (P = 0.15). The MBW estimated width of the SV distribution was 0.05 (10.7%) higher than that estimated using SVI, and smaller than the intertest variability of the MBW estimation [inter-MBW (SD) for the width of the SV distribution was 0.08 (15.8)%]. To assess reliability, SVI was performed twice on 13 subjects showing small differences between measurements of SV heterogeneity (typical error 0.05, 12%). In conclusion, quantitative estimations of SV heterogeneity from SVI are reliable and similar to those obtained using MBW, with SVI providing spatial information that is absent in MBW.


Journal of Magnetic Resonance Imaging | 2011

Measuring lung water: ex vivo validation of multi-image gradient echo MRI.

Sebastiaan Holverda; Rebecca J. Theilmann; Rui Carlos Sá; Tatsuya J. Arai; Evan T. Hall; David J. Dubowitz; G. Kim Prisk; Susan R. Hopkins

To validate a fast gradient echo sequence for rapid (9 s) quantitative imaging of lung water.


IEEE Transactions on Biomedical Engineering | 2002

Automated breath detection on long-duration signals using feedforward backpropagation artificial neural networks

Rui Carlos Sá; Yves Verbandt

A new breath-detection algorithm is presented, intended to automate the analysis of respiratory data acquired during sleep. The algorithm is based on two independent artificial neural networks (ANN/sub insp/ and ANN/sub expi/) that recognize, in the original signal, windows of interest where the onset of inspiration and expiration occurs. Postprocessing consists in finding inside each of these windows of interest minimum and maximum corresponding to each inspiration and expiration. The ANN/sub insp/ and ANN/sub expi/ correctly determine respectively 98.0% and 98.7% of the desired windows, when compared with 29 820 inspirations and 29 819 expirations detected by a human expert, obtained from three entire-night recordings. Postprocessing allowed determination of inspiration and expiration onsets with a mean difference with respect to the same human expert of (mean /spl plusmn/ SD) 34 /spl plusmn/ 71 ms for inspiration and 5 /spl plusmn/ 46 ms for expiration. The method proved to be effective in detecting the onset of inspiration and expiration in full night continuous recordings. A comparison of five human experts performing the same classification task yielded that the automated algorithm was undifferentiable from these human experts, failing within the distribution of human expert results. Besides being applicable to adult respiratory volume data, the presented algorithm was also successfully applied to infant sleep data, consisting of uncalibrated rib cage and abdominal movement recordings. A comparison with two previously published algorithms for breath detection in respiratory volume signal shows that the presented algorithm has a higher specificity, while presenting similar or higher positive predictive values.


Journal of Applied Physiology | 2015

Inhaled nitric oxide alters the distribution of blood flow in the healthy human lung, suggesting active hypoxic pulmonary vasoconstriction in normoxia

Amran K. Asadi; Rui Carlos Sá; Nick H. Kim; Rebecca J. Theilmann; Susan R. Hopkins; Richard B. Buxton; G. Kim Prisk

Hypoxic pulmonary vasoconstriction (HPV) is thought to actively regulate ventilation-perfusion (V̇a/Q̇) matching, reducing perfusion in regions of alveolar hypoxia. We assessed the extent of HPV in the healthy human lung using inhaled nitric oxide (iNO) under inspired oxygen fractions (FiO2 ) of 0.125, 0.21, and 0.30 (a hyperoxic stimulus designed to abolish HPV without the development of atelectasis). Dynamic measures of blood flow were made in a single sagittal slice of the right lung of five healthy male subjects using an arterial spin labeling (ASL) MRI sequence, following a block stimulus pattern (3 × 60 breaths) with 40 ppm iNO administered in the central block. The overall spatial heterogeneity, spatiotemporal variability, and regional pattern of pulmonary blood flow was quantified as a function of condition (FiO2 × iNO state). While spatial heterogeneity did not change significantly with iNO administration or FiO2 , there were statistically significant increases in Global Fluctuation Dispersion, (a marker of spatiotemporal flow variability) when iNO was administered during hypoxia (5.4 percentage point increase, P = 0.003). iNO had an effect on regional blood flow that was FiO2 dependent (P = 0.02), with regional changes in the pattern of blood flow occurring in hypoxia (P = 0.007) and normoxia (P = 0.008) tending to increase flow to dependent lung at the expense of nondependent lung. These findings indicate that inhaled nitric oxide significantly alters the distribution of blood flow in both hypoxic and normoxic healthy subjects, and suggests that some baseline HPV may indeed be present in the normoxic lung.


Journal of Visualized Experiments | 2011

Magnetic Resonance Imaging Quantification of Pulmonary Perfusion using Calibrated Arterial Spin Labeling

Tatsuya J. Arai; G. Kim Prisk; Sebastiaan Holverda; Rui Carlos Sá; Rebecca J. Theilmann; A. Cortney Henderson; Matthew V. Cronin; Richard B. Buxton; Susan R. Hopkins

UNLABELLED This demonstrates a MR imaging method to measure the spatial distribution of pulmonary blood flow in healthy subjects during normoxia (inspired O(2), fraction (F(I)O(2)) = 0.21) hypoxia (F(I)O(2) = 0.125), and hyperoxia (F(I)O(2) = 1.00). In addition, the physiological responses of the subject are monitored in the MR scan environment. MR images were obtained on a 1.5 T GE MRI scanner during a breath hold from a sagittal slice in the right lung at functional residual capacity. An arterial spin labeling sequence (ASL-FAIRER) was used to measure the spatial distribution of pulmonary blood flow and a multi-echo fast gradient echo (mGRE) sequence was used to quantify the regional proton (i.e. H(2)O) density, allowing the quantification of density-normalized perfusion for each voxel (milliliters blood per minute per gram lung tissue). With a pneumatic switching valve and facemask equipped with a 2-way non-rebreathing valve, different oxygen concentrations were introduced to the subject in the MR scanner through the inspired gas tubing. A metabolic cart collected expiratory gas via expiratory tubing. Mixed expiratory O(2) and CO(2) concentrations, oxygen consumption, carbon dioxide production, respiratory exchange ratio, respiratory frequency and tidal volume were measured. Heart rate and oxygen saturation were monitored using pulse-oximetry. Data obtained from a normal subject showed that, as expected, heart rate was higher in hypoxia (60 bpm) than during normoxia (51) or hyperoxia (50) and the arterial oxygen saturation (SpO(2)) was reduced during hypoxia to 86%. Mean ventilation was 8.31 L/min BTPS during hypoxia, 7.04 L/min during normoxia, and 6.64 L/min during hyperoxia. Tidal volume was 0.76 L during hypoxia, 0.69 L during normoxia, and 0.67 L during hyperoxia. Representative quantified ASL data showed that the mean density normalized perfusion was 8.86 ml/min/g during hypoxia, 8.26 ml/min/g during normoxia and 8.46 ml/min/g during hyperoxia, respectively. In this subject, the relative dispersion, an index of global heterogeneity, was increased in hypoxia (1.07 during hypoxia, 0.85 during normoxia, and 0.87 during hyperoxia) while the fractal dimension (Ds), another index of heterogeneity reflecting vascular branching structure, was unchanged (1.24 during hypoxia, 1.26 during normoxia, and 1.26 during hyperoxia). Overview. This protocol will demonstrate the acquisition of data to measure the distribution of pulmonary perfusion noninvasively under conditions of normoxia, hypoxia, and hyperoxia using a magnetic resonance imaging technique known as arterial spin labeling (ASL). RATIONALE Measurement of pulmonary blood flow and lung proton density using MR technique offers high spatial resolution images which can be quantified and the ability to perform repeated measurements under several different physiological conditions. In human studies, PET, SPECT, and CT are commonly used as the alternative techniques. However, these techniques involve exposure to ionizing radiation, and thus are not suitable for repeated measurements in human subjects.


IEEE Transactions on Biomedical Engineering | 2008

A Method for the Analysis of Respiratory Sinus Arrhythmia Using Continuous Wavelet Transforms

L. Cnockaert; Pierre-François Migeotte; L. Daubigny; G. K. Prisk; F. Grenez; Rui Carlos Sá

A continuous wavelet transform-based method is presented to study the nonstationary strength and phase delay of the respiratory sinus arrhythmia (RSA). The RSA is the cyclic variation of instantaneous heart rate at the breathing frequency. In studies of cardio-respiratory interaction during sleep, paced breathing or postural changes, low respiratory frequencies, and fast changes can occur. Comparison on synthetic data presented here shows that the proposed method outperforms traditional short-time Fourier-transform analysis in these conditions. On the one hand, wavelet analysis presents a sufficient frequency-resolution to handle low respiratory frequencies, for which time frames should be long in Fourier-based analysis. On the other hand, it is able to track fast variations of the signals in both amplitude and phase for which time frames should be short in Fourier-based analysis.


Journal of Applied Physiology | 2013

Spatial-temporal dynamics of pulmonary blood flow in the healthy human lung in response to altered FiO2

Amran K. Asadi; Matthew V. Cronin; Rui Carlos Sá; Rebecca J. Theilmann; Sebastiaan Holverda; Susan R. Hopkins; Richard B. Buxton; G. Kim Prisk

The temporal dynamics of blood flow in the human lung have been largely unexplored due to the lack of appropriate technology. Using the magnetic resonance imaging method of arterial spin labeling (ASL) with subject-gated breathing, we produced a dynamic series of flow-weighted images in a single sagittal slice of the right lung with a spatial resolution of ~1 cm(3) and a temporal resolution of ~10 s. The mean flow pattern determined from a set of reference images was removed to produce a time series of blood flow fluctuations. The fluctuation dispersion (FD), defined as the spatial standard deviation of each flow fluctuation map, was used to quantify the changes in distribution of flow in six healthy subjects in response to 100 breaths of hypoxia (FI(O(2)) = 0.125) or hyperoxia (FI(O(2)) = 1.0). Two reference frames were used in calculation, one determined from the initial set of images (FD(global)), and one determined from the mean of each corresponding baseline or challenge period (FD(local)). FD(local) thus represented changes in temporal variability as a result of intervention, whereas FD(global) encompasses both FD(local) and any generalized redistribution of flow associated with switching between two steady-state patterns. Hypoxic challenge resulted in a significant increase (96%, P < 0.001) in FD(global) from the normoxic control period and in FD(local) (46%, P = 0.0048), but there was no corresponding increase in spatial relative dispersion (spatial standard deviation of the images divided by the mean; 8%, not significant). There was a smaller increase in FD(global) in response to hyperoxia (47%, P = 0.0015) for the single slice, suggestive of a more general response of the pulmonary circulation to a change from normoxia to hyperoxia. These results clearly demonstrate a temporal change in the sampled distribution of pulmonary blood flow in response to hypoxia, which is not observed when considering only the relative dispersion of the spatial distribution.

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G. Kim Prisk

University of California

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G. K. Prisk

University of California

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Amran K. Asadi

University of California

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