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Dive into the research topics where Sabina Abbrent is active.

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Featured researches published by Sabina Abbrent.


Biomacromolecules | 2017

Structure and Dynamics of Alginate Gels Cross-Linked by Polyvalent Ions Probed via Solid State NMR Spectroscopy

Jiri Brus; Martina Urbanova; Jiri Czernek; Miroslava Pavelková; Katerina Kubova; Jakub Vyslouzil; Sabina Abbrent; Rafal Konefal; Jiri Horský; David Vetchy; Jan Vysloužil; Pavel Kulich

Alginate gels are an outstanding biomaterial widely applicable in tissue engineering, medicine, and pharmacy for cell transplantation, wound healing and efficient bioactive agent delivery, respectively. This contribution provides new and comprehensive insight into the atomic-resolution structure and dynamics of polyvalent ion-cross-linked alginate gels in microbead formulations. By applying various advanced solid-state NMR (ssNMR) spectroscopy techniques, we verified the homogeneous distribution of the cross-linking ions in the alginate gels and the high degree of ion exchange. We also established that the two-component character of the alginate gels arises from the concentration fluctuations of residual water molecules that are preferentially localized along polymer chains containing abundant mannuronic acid (M) residues. These hydrated M-rich blocks tend to self-aggregate into subnanometer domains. The resulting coexistence of two types of alginate chains differing in segmental dynamics was revealed by 1H-13C dipolar profile analysis, which indicated that the average fluctuation angles of the stiff and mobile alginate segments were about 5-9° or 30°, respectively. Next, the 13C CP/MAS NMR spectra indicated that the alginate polymer microstructure was strongly dependent on the type of cross-linking ion. The polymer chain regularity was determined to systematically decrease as the cross-linking ion radius decreased. Consistent with the 1H-1H correlation spectra, regular structures were found for the gels cross-linked by relatively large alkaline earth cations (Ba2+, Sr2+, or Ca2+), whereas the alginate chains cross-linked by bivalent transition metal ions (Zn2+) and trivalent metal cations (Al3+) exhibited significant irregularities. Notably, however, the observed disordering of the alginate chains was exclusively attributed to the M residues, whereas the structurally well-defined gels all contained guluronic acid (G) residues. Therefore, a key role of the units in M-rich blocks as mediators promoting the self-assembly of alginate chains was experimentally confirmed. Finally, combining 2D 27Al 3Q/MAS NMR spectroscopy with density functional theory (DFT) calculations provided previously unreported insight into the structure of the Al3+ cross-linking centers. Notably, even with a low residual amount of water, these cross-linking units adopt exclusively 6-fold octahedral coordination and exhibit significant motion, which considerably reduces quadrupolar coupling constants. Thus, the experimental strategy presented in this study provides a new perspective on cross-linked alginate structure and dynamics for which high-quality diffraction data at the atomic resolution level are inherently unavailable.


ChemPhysChem | 2017

Unexpected crystallization patterns of zinc-boron-imidazolate framework (ZBIF-1): NMR crystallography of integrated metal-organic frameworks

Libor Kobera; Jan Rohlicek; Jiri Czernek; Sabina Abbrent; Magdaléna Strečková; Tibor Sopcak; Jiri Brus

Framework materials, that is, metal-organic frameworks (MOFs) and inorganic frameworks (zeolites), are porous systems with regular structures that provide valuable properties suitable for sorption, catalysis, molecular sieving, and so on. Herein, an efficient, experimental/computational strategy is presented that allows detailed characterization of a polycrystalline MOF system, namely, zinc boron imidazolate framework ZBIF-1, with two integrated unit cells on the atomic-resolution level. Although high-resolution 1 H, 11 B, 13 C, and 15 N MAS NMR spectra provide valuable structural information on the coexistence of two distinct asymmetric units in the investigated system, an NMR crystallography approach combining X-ray powder diffraction, solid-state NMR spectroscopy, and DFT calculations allowed the exact structure of the secondary crystalline phase to be firmly defined and, furthermore, the mutual interconnectivity of the two crystalline frameworks to be resolved. Thus, this study shows the versatility and efficiency of solid-state NMR crystallography for the investigation of the wide family of MOF materials with their extensive structural complexity.


Inorganic Chemistry | 2018

The Nature of Chemical Bonding in Lewis Adducts as Reflected by 27Al NMR Quadrupolar Coupling Constant: Combined Solid-State NMR and Quantum Chemical Approach

Libor Kobera; Jiri Czernek; Sabina Abbrent; Hana Mackova; Lukas Pavlovec; Jan Rohlicek; Jiri Brus

Lewis acids and Lewis adducts are widely used in the chemical industry because of their high catalytic activity. Their precise geometrical description and understanding of their electronic structure are a crucial step for targeted synthesis and specific use. Herein, we present an experimental/computational strategy based on a solid-state NMR crystallographic approach allowing for detailed structural characterization of a wide range of organoaluminum compounds considerably differing in their chemical constitution. In particular, we focus on the precise measurement and subsequent quantum-chemical analysis of many different 27Al NMR resonances in the extremely broad range of quadrupolar coupling constants from 1 to 50 MHz. In this regard, we have optimized an experimental strategy combining a range of static as well as magic angle spinning experiments allowing reliable detection of the entire set of aluminum sites present in trimesitylaluminum (AlMes3) reaction products. In this way, we have spectroscopically resolved six different products in the resulting polycrystalline mixture. All 27Al NMR resonances are precisely recorded and comprehensively analyzed by a quantum-chemical approach. Interestingly, in some cases the recorded 27Al solid-state NMR spectra show unexpected quadrupolar coupling constant values reaching up to ca. 30 MHz, which are attributed to tetra-coordinated aluminum species (Lewis adducts with trigonal pyramidal geometry). The cause of this unusual behavior is explored by analyzing the natural bond orbitals and complexation energies. The linear correlation between the quadrupolar coupling constant value and the nature of bonds in the Lewis adducts is revealed. Moreover, the 27Al NMR data are shown to be sensitive to the geometry of the tetra-coordinated organoaluminum species. Our findings thus provide a viable approach for the direct identification of Lewis acids and Lewis adducts, not only in the investigated multicomponent organoaluminum compounds but also in inorganic zeolites featuring catalytically active trigonal (AlIII) and strongly perturbed AlIV sites.


Macromolecules | 2015

Structure and Distribution of Cross-Links in Boron-Modified Phenol–Formaldehyde Resins Designed for Soft Magnetic Composites: A Multiple-Quantum 11B–11B MAS NMR Correlation Spectroscopy Study

Libor Kobera; Jiri Czernek; Magda Strečková; Martina Urbanova; Sabina Abbrent; Jiri Brus


Polymer | 2016

Influence of ionic liquid-modified LDH on microwave-assisted polymerization of ε-caprolactone

Jana Kredatusová; Hynek Beneš; Sébastien Livi; Ognen Pop-Georgievski; Petra Ecorchard; Sabina Abbrent; Ewa Pavlova; Dariusz Bogdal


Crystal Growth & Design | 2016

Predicting the Crystal Structure of Decitabine by Powder NMR Crystallography: Influence of Long-Range Molecular Packing Symmetry on NMR Parameters

Jiri Brus; Jiri Czernek; Libor Kobera; Martina Urbanova; Sabina Abbrent; Michal Hušák


Tetrahedron | 2018

Solvent-free, catalyst-free aza-Michael addition of cyclohexylamine to diethyl maleate: Reaction mechanism and kinetics

Michal Bláha; Olga Trhlíková; Jiří Podešva; Sabina Abbrent; Milos Steinhart; Jiří Dybal; Miroslava Dušková-Smrčková


Macromolecules | 2018

Efficient Strategy for Determining the Atomic-Resolution Structure of Micro- and Nanocrystalline Solids within Polymeric Microbeads: Domain-Edited NMR Crystallography

Jiri Brus; Jiri Czernek; Martin Hruby; Pavel Švec; Libor Kobera; Sabina Abbrent; Martina Urbanova


Annual reports on NMR spectroscopy | 2016

Advances in 27Al MAS NMR Studies of Geopolymers

Jiri Brus; Sabina Abbrent; Libor Kobera; Martina Urbanova; Pavel Čuba


Polymer | 2017

A novel insight into the origin of toughness in polypropylene–calcium carbonate microcomposites: Multivariate analysis of ss-NMR spectra

Olivia Kukackova; Nguyen Viet Dung; Sabina Abbrent; Martina Urbanova; Jiri Kotek; Jiri Brus

Collaboration


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Jiri Brus

Academy of Sciences of the Czech Republic

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Libor Kobera

Academy of Sciences of the Czech Republic

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Martina Urbanova

Academy of Sciences of the Czech Republic

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Jiri Czernek

Academy of Sciences of the Czech Republic

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Jiří Dybal

Academy of Sciences of the Czech Republic

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Barbora Doušová

Institute of Chemical Technology in Prague

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David Koloušek

Institute of Chemical Technology in Prague

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David Vetchy

University of Veterinary and Pharmaceutical Sciences Brno

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Ewa Pavlova

Academy of Sciences of the Czech Republic

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Jakub Vyslouzil

University of Veterinary and Pharmaceutical Sciences Brno

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