Sandra A. Binning

Finding the best estimates of metabolic rates in a coral reef fish

SUMMARY Metabolic rates of aquatic organisms are estimated from measurements of oxygen consumption rates () through swimming and resting respirometry. These distinct approaches are increasingly used in ecophysiology and conservation physiology studies; however, few studies have tested whether they yield comparable results. We examined whether two fundamental measures, standard metabolic rate (SMR) and maximum metabolic rate (MMR), vary based on the method employed. Ten bridled monocle bream (Scolopsis bilineata) were exercised using (1) a critical swimming speed (Ucrit) protocol, (2) a 15 min exhaustive chase protocol and (3) a 3 min exhaustive chase protocol followed by brief (1 min) air exposure. Protocol 1 was performed in a swimming respirometer whereas protocols 2 and 3 were followed by resting respirometry. SMR estimates in swimming respirometry were similar to those in resting respirometry when a three-parameter exponential or power function was used to extrapolate the swimming speed– relationship to zero swimming speed. In contrast, MMR using the Ucrit protocol was 36% higher than MMR derived from the 15 min chase protocol and 23% higher than MMR using the 3 min chase/1 min air exposure protocol. For strong steady (endurance) swimmers, such as S. bilineata, swimming respirometry can produce more accurate MMR estimates than exhaustive chase protocols because oxygen consumption is measured during exertion. However, when swimming respirometry is impractical, exhaustive chase protocols should be supplemented with brief air exposure to improve measurement accuracy. Caution is warranted when comparing MMR estimates obtained with different respirometry methods unless they are cross-validated on a species-specific basis.

Public Data Archiving in Ecology and Evolution: How Well Are We Doing?

Policies that mandate public data archiving (PDA) successfully increase accessibility to data underlying scientific publications. However, is the data quality sufficient to allow reuse and reanalysis? We surveyed 100 datasets associated with nonmolecular studies in journals that commonly publish ecological and evolutionary research and have a strong PDA policy. Out of these datasets, 56% were incomplete, and 64% were archived in a way that partially or entirely prevented reuse. We suggest that cultural shifts facilitating clearer benefits to authors are necessary to achieve high-quality PDA and highlight key guidelines to help authors increase their data’s reuse potential and compliance with journal data policies.

Troubleshooting Public Data Archiving: Suggestions to Increase Participation

Public data archiving has many benefits for society, but some scientists are reluctant to share their data. This Perspective offers some practical solutions to reduce costs and increase benefits for individual researchers.

Ectoparasites increase swimming costs in a coral reef fish

Ectoparasites can reduce individual fitness by negatively affecting behavioural, morphological and physiological traits. In fishes, there are potential costs if ectoparasites decrease streamlining, thereby directly compromising swimming performance. Few studies have examined the effects of ectoparasites on fish swimming performance and none distinguish between energetic costs imposed by changes in streamlining and effects on host physiology. The bridled monocle bream (Scolopsis bilineatus) is parasitized by an isopod (Anilocra nemipteri), which attaches above the eye. We show that parasitized fish have higher standard metabolic rates (SMRs), poorer aerobic capacities and lower maximum swimming speeds than non-parasitized fish. Adding a model parasite did not affect SMR, but reduced maximum swimming speed and elevated oxygen consumption rates at high speeds to levels observed in naturally parasitized fish. This demonstrates that ectoparasites create drag effects that are important at high speeds. The higher SMR of naturally parasitized fish does, however, reveal an effect of parasitism on host physiology. This effect was easily reversed: fish whose parasite was removed 24 h earlier did not differ from unparasitized fish in any performance metrics. In sum, the main cost of this ectoparasite is probably its direct effect on streamlining, reducing swimming performance at high speeds.

Specialized morphology for a generalist diet: evidence for Liem's Paradox in a cichlid fish

The stable isotope ratio and seasonal changes in diet of Alluauds haplo Astatoreochromis alluaudi, a cichlid fish with massive pharyngeal jaws well known for its ability to process hard-bodied prey, are described. The diet of A. alluaudi was quantified in Lake Saka, Uganda, over a period of 30 months. Variation in physico-chemical variables (mean monthly rainfall, water temperature, turbidity and dissolved oxygen), as well as potential competitor density and food abundance, was measured throughout the second half of the study (14 months). Stomach contents and isotope analysis revealed a diet comprised mainly of fishes and insects, with a low contribution of molluscs (0-33%) in any given month. No correlation was detected between diet and either macroinvertebrate abundance or competitor abundance. The running average rainfall was positively related to the percentage of fish consumed per month. Although A. alluaudi exhibits an apparent molluscivorous trophic morphology in Lake Saka, molluscs did not appear to compose a major portion of its diet. Gradients of rainfall seemed to be the most important environmental predictor of diet choice in Lake Saka. These results are discussed with reference to Liems Paradox that apparently morphologically specialized fishes often function as generalist feeders in the wild.

Demystifying animal ‘personality’ (or not): why individual variation matters to experimental biologists

ABSTRACT Animal ‘personality’, defined as repeatable inter-individual differences in behaviour, is a concept in biology that faces intense controversy. Critics argue that the field is riddled with terminological and methodological inconsistencies and lacks a sound theoretical framework. Nevertheless, experimental biologists are increasingly studying individual differences in physiology and relating these to differences in behaviour, which can lead to fascinating insights. We encourage this trend, and in this Commentary we highlight some of the benefits of estimating variation in (and covariation among) phenotypic traits at the inter- and intra-individual levels. We focus on behaviour while drawing parallels with physiological and performance-related traits. First, we outline some of the confusion surrounding the terminology used to describe repeatable inter-individual differences in behaviour. Second, we argue that acknowledging individual behavioural differences can help researchers avoid sampling and experimental bias, increase explanatory power and, ultimately, understand how selection acts on physiological traits. Third, we summarize the latest methods to collect, analyse and present data on individual trait variation. We note that, while measuring the repeatability of phenotypic traits is informative in its own right, it is only the first step towards understanding how natural selection and genetic architecture shape intra-specific variation in complex, labile traits. Thus, understanding how and why behavioural traits evolve requires linking repeatable inter-individual behavioural differences with core aspects of physiology (e.g. neurophysiology, endocrinology, energy metabolism) and evolutionary biology (e.g. selection gradients, heritability). Summary: Approaches used in quantitative genetics and animal personality research are useful to study the ecological and evolutionary consequences of individual variation in behaviour, physiology, performance and other complex traits.

Unsteady flow affects swimming energetics in a labriform fish (Cymatogaster aggregata)

Unsteady water flows are common in nature, yet the swimming performance of fishes is typically evaluated at constant, steady speeds in the laboratory. We examined how cyclic changes in water flow velocity affect the swimming performance and energetics of a labriform swimmer, the shiner surfperch, Cymatogaster aggregata, during station holding. Using intermittent-flow respirometry, we measured critical swimming speed (Ucrit), oxygen consumption rates (ṀO2) and pectoral fin use in steady flow versus unsteady flows with either low- [0.5 body lengths (BL) s−1] or high-amplitude (1.0 BL s−1) velocity fluctuations, with a 5 s period. Individuals in low-amplitude unsteady flow performed as well as fish in steady flow. However, swimming costs in high-amplitude unsteady flow were on average 25.3% higher than in steady flow and 14.2% higher than estimated values obtained from simulations based on the non-linear relationship between swimming speed and oxygen consumption rate in steady flow. Time-averaged pectoral fin use (fin-beat frequency measured over 300 s) was similar among treatments. However, measures of instantaneous fin use (fin-beat period) and body movement in high-amplitude unsteady flow indicate that individuals with greater variation in the duration of their fin beats were better at holding station and consumed less oxygen than fish with low variation in fin-beat period. These results suggest that the costs of swimming in unsteady flows are context dependent in labriform swimmers, and may be influenced by individual differences in the ability of fishes to adjust their fin beats to the flow environment.

Wave-induced abiotic stress shapes phenotypic diversity in a coral reef fish across a geographical cline

While morphological variation across geographical clines has been well documented, it is often unclear whether such changes enhance individual performance to local environments. We examined whether the damselfish Acanthochromis polyacanthus display functional changes in swimming phenotype across a 40-km cline in wave-driven water motion on the Great Barrier Reef, Australia. A. polyacanthus populations displayed strong intraspecific variation in swimming morphology and performance that matched local levels of water motion: individuals on reefs subject to high water motion displayed higher aspect-ratio fins and faster swimming speeds than conspecifics on sheltered reefs. Remarkably, intraspecific variation within A. polyacanthus spanned over half the diversity seen among closely related damselfish species from the same region. We find that local selection driven by wave-induced abiotic stress is an overarching ecological mechanism shaping the inter- and intraspecific locomotor diversity of coral reef fishes.

Is intraspecific variation in diet and morphology related to environmental gradients? Exploring Liem's paradox in a cichlid fish

Interspecific studies have demonstrated that trophic morphology and ecology are not always tightly matched: a phenomenon rarely reported at the intraspecific level. In the present study, we explored relationships among diet, morphology and the environment in a widespread cichlid fish, Astatoreochromis alluaudi (Pellegrin 1904), from 6 sites in southern Uganda to test for evidence of eco-morphological matching at the interdemic level. Previous studies of Astatoreochromis alluaudi have demonstrated developmental plasticity in trophic morphology in response to diet: a mollusk diet produces specimens with large pharyngeal jaws and muscles, whereas a soft-food diet produces smaller pharyngeal jaws and corresponding changes in musculature. Sites were chosen to maximize variability in environmental variables that might directly or indirectly affect trophic morphology. We found significant differences in pharyngeal jaw and muscle morphology among populations. Similarly, we found differences in diets among sites: mollusks were found in the stomachs of fish from only 2 populations sampled, despite the presence of mollusks in 5 of the 6 sites. Although trophic morphology did match the observed diet in 2 sites, diet did not correlate with either morphology or environmental variables across sites, nor were environmental variables correlated with morphological variation among sites. These results suggest that mismatch can occur among different populations of a single species for reasons such as seasonality in resources, developmental plasticity and/or complex indirect interactions. Intraspecific mechanisms should be further studied in order to better understand the complex relationships between morphological specialization and ecological generalization.

Localized invasion of the North American Harris mud crab, Rhithropanopeus harrisii, in the Panama Canal: implications for eradication and spread

As the rate of biological invasions continues to increase, a growing number of aquatic introduced species are becoming globally widespread. Despite this ubiquitous phenomenon, rarely do we discover aquatic invaders early enough to allow the possibility of eradication. Recently, the North American Harris mud crab (Rhithropanopeus harrisii) was found in the waters adjacent to the Panama Canal and herein we provide an assessment of the crab’s distribution in Panama to evaluate the possibility of eradication. Using salinity tolerance experiments, we also evaluate the potential for further spread of this crab within the Canal. Our results suggest that populations of R. harrisii are currently limited to two manmade lagoons which are adjacent to the Panama Canal. Our experiments suggest that both juvenile and adult R. harrisii can survive in salinities found outside its current range in Panama. Although it is difficult to predict the potential for future spread and impacts in Panama, current management strategies could reduce the probability for spread locally as well as elsewhere in the world given the intensity of shipping in this region. The current containment of this invader suggests that a localized eradication may be possible.