Sandrine Chéron

Formation of carbonate chimneys in the Mediterranean Sea linked to deep-water oxygen depletion

Marine sediments at ocean margins vent substantial amounts of methane1, 2. Microbial oxidation of the methane released can trigger the precipitation of carbonate within sediments and support a broad diversity of seafloor ecosystems3, 4. The factors controlling microbial activity and carbonate precipitation associated with the seepage of submarine fluid over geological time remain poorly constrained. Here, we characterize the petrology and geochemistry of rocks sampled from metre-size build-ups of methane-derived carbonate chimneys located at the Amon mud volcano on the Nile deep-sea fan. We find that these carbonates comprise porous structures composed of aggregated spherules of aragonite, and closely resemble microbial carbonate reefs forming at present in the anoxic bottom waters of the Black Sea5. Using U-series dating, we show that the Amon carbonate build-ups formed between 12 and 7 thousand years ago, contemporaneous with the deposition of organic-rich sediments in the eastern Mediterranean, the so-called sapropel layer S1. We propose that the onset of deep-water suboxic or anoxic conditions associated with sapropel formation resulted in the development of intense anaerobic microbial activity at the sea floor, and thus the formation of carbonate chimneys.

Biogeochemical insights into microbe-mineral-fluid interactions in hydrothermal chimneys using enrichment culture

Active hydrothermal chimneys host diverse microbial communities exhibiting various metabolisms including those involved in various biogeochemical cycles. To investigate microbe–mineral–fluid interactions in hydrothermal chimney and the driver of microbial diversity, a cultural approach using a gas-lift bioreactor was chosen. An enrichment culture was performed using crushed active chimney sample as inoculum and diluted hydrothermal fluid from the same vent as culture medium. Daily sampling provided time-series access to active microbial diversity and medium composition. Active archaeal and bacterial communities consisted mainly of sulfur, sulfate and iron reducers and hydrogen oxidizers with the detection of Thermococcus, Archaeoglobus, Geoglobus, Sulfurimonas and Thermotoga sequences. The simultaneous presence of active Geoglobus sp. and Archaeoglobus sp. argues against competition for available carbon sources and electron donors between sulfate and iron reducers at high temperature. This approach allowed the cultivation of microbial populations that were under-represented in the initial environmental sample. The microbial communities are heterogeneously distributed within the gas-lift bioreactor; it is unlikely that bulk mineralogy or fluid chemistry is the drivers of microbial community structure. Instead, we propose that micro-environmental niche characteristics, created by the interaction between the mineral grains and the fluid chemistry, are the main drivers of microbial diversity in natural systems.

Geochemical Dynamics of the Natural-Gas Hydrate System in the Sea of Marmara, Offshore Turkey

Natural-gas hydrate systems are solid-state light-hydrocarbon accumulations which are encountered in the permafrost and the continental margins. They are stable under highpressure and low-temperature conditions and represent the major hydrocarbon volume on earth (Kvenvolden, 1988). Gas hydrates consist of a polycrystalline structure where a light hydrocarbon is trapped within a water lattice. The nature of the hydrocarbons is strongly related to their origin which is either microbial (also called biogenic) or thermogenic. Microbial gas-hydrate systems contain hydrocarbons produced by bacteria and archaea. There are primarily methane with a very small amount of ethane and eventually propane (Max, 2003). Others non-hydrocarbon compounds like hydrogen sulphur and carbon dioxide are also present. In the case of microbial gases, the hydrates are formed at or near the gas production area. Owing to the very high-methane content, these hydrates are commonly called methane-hydrate systems.